Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139407565
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Entry
139407565 CDS
T10872
Name
(RefSeq) ATP-binding cassette sub-family C member 8-like
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
139407565
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139407565
Transporters [BR:
ocla02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
139407565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
nSTAND1
AAA_29
AAA_23
CIS_TMP
DEAD
TraD_N
Motif
Other DBs
NCBI-GeneID:
139407565
NCBI-ProteinID:
XP_071007490
LinkDB
All DBs
Position
4:11182991..11339401
Genome browser
AA seq
1592 aa
AA seq
DB search
MSLAFCGNENNSLAYNVDRGVLNNGCFLDALNVVPHIFLLFITFPILFIGWGSQSSKVHI
HHSTWLHFPGHNLRWLLTFILLFVLVCEIAEGIVSDGFTQSLHLHLYMPAGLAFMAGITS
IIYYHNIETSNFPKLLLALLFYWVLAFLMKTIKFAKYTEHSVGLRQLRYCITGLLALLYG
LLLAVEINVILGRRYLCFTEATEVKPPEDLQDLGVRFLQPFVNLLSKATYWWMNTFITAA
HRRPIDLKVIGKLPIAMRALTNYLKLCKAFESQRRPLGSMPQGPKWIWRALRQAFGRPLI
ISITFRFLADLLGFAGPLCISGIVHHISKDNRTIQPPIKLLGVYFISSQEFLANAYVLAV
LLFFALILQRTFLQASYYVAIETGINLRGAIQTKIYNKIMRLCTSNMSMGELTVGQICNL
VAIDTNQLMWFFFLCPNLWAMPVQIIVGVILLYYLLGISALIGATVIAVLAPVQYFVATK
LSQAQKSTLEYSSERLKKTNELLRGIKLLKLYAWEHIFCHSVEETRGKELTSLQTFALYT
SISIFMNAAIPIAAVLTTFVVHVHISEEADLSPAVAFASLSLFHILVTPLFLLSSVVRST
VKALVSAQKLSEFFSSDEIGDEQEPNATMPTGPSNHETIPSGPRNHNNKYQAVPLKVVNR
KRHPRDDWNNYSHEGGNPPPQEGDQDLCIRITSGYFTWTDGTPTLSNVNIKVPFGQLTMI
VGQVGCGKSSLLLAALGEMQRVSGTVTWNILPSLDSEGDDSPTSDKDAADDGDIQKRGSV
AYASQKPWLLNATLVENITFEMPMIKPRYKAVIEACSLQPDIDILPQGDQTEIGERGIIL
SGGQRQRIGVARALYQQTNVVLLDDPFSALDIHLSDHLMQEGIRKLLREEKRTVVLVTHK
LQYLPHADWIIAMKDGTIQTEGTLKDIQNSDPKLFEQWKTLMHRQDGEFEKETVAESMTV
LERKNLRRAMYSKEASKTEEEHEEESVESEEDDSLSQAMRHRTTIPWRSCGVYLSSAGLL
LPLLLLSQLFKHTLMVAIDYWLAHWTSHVITAKMDATGRNCTVAQECGFSHSWYLSVFSV
LCCLGIVLCLVTSVAVEWTGLRVAKELHHNLLSKIILAPMRLFETTPLGNILNRFSSDTN
TIDQHIPATLECLSRSTLLCVSALGVISYVTPLFLIALVPLAIACYFIQKYFRVASRDLQ
QLEDSTQLPLLSHFSETVEGLTTIRAFRYESRFRQRLLEYTDANNIASLFLTAANRWLEV
RMDYVGACVVLIAAVASISNSLYDHLSTGLVGLGLTYALMVSNYLNWMVRNLADMEVQLG
SVKRINGLLKTEPENYEGLMAASQVPDGWPRQGEIQIQNLSVRYDTTLKPVLKQVNAHIS
PGQKVGICGRTGSGKSSFSLAFFRMVDMFEGRIIIDDIDIAKLPLQTLRSRFSIILQDPI
LFSGTIRFNLDPEMKATDDMLWEALEIAQLKPVVKTLPGGLDAMVTEGGENFSQGQRQLF
CLARAFVRKSSILIMDEATASIDMATESILQKVVMTAFADRTVVTIAHRVHTILNADLVI
VMKRGIILEYDRPQALLEKEDSVFSAFVKADK
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atgtccttggcattctgtggaaacgagaacaactcgttggcatacaacgtggaccgcggc
gtcctcaacaacggctgcttcctggacgcgctcaacgtggtgccgcacatcttcttgctc
ttcatcactttccccatcctcttcattggctggggcagccagagctccaaggtgcacatc
caccacagcacctggctgcacttccctggtcacaacctgcgctggctcctcaccttcatc
ctcctctttgtcctggtctgtgagattgctgagggcatcgtctccgatgggttcacccag
tccctccacctgcacctgtacatgcctgcaggcctggccttcatggctgggatcacctcc
atcatctactaccacaacatagagacctccaacttccccaagctactgctagccctactg
ttctactgggtcttggcctttctgatgaaaaccatcaagttcgccaagtacacggagcac
agcgttggcctgagacaactccgctactgcatcacaggactcctggccctgctctacgga
ctactactggctgtggagatcaatgtcatactgggcaggcgctacctgtgtttcactgag
gctacagaggtgaagcctccagaggacctgcaggacctgggggtgaggttcctgcagccc
tttgtcaacctgctgtccaaggccacctattggtggatgaacacattcatcacggcagcc
caccgccgccccatcgacctcaaggtcatcggcaagctgcctatcgctatgcgagccctc
accaactacctgaagctctgcaaggctttcgagagccagaggaggcctctgggctctatg
ccgcagggccctaagtggatttggagggccctacgccaggcgtttggacggcccctcatc
atcagcatcaccttccgcttcctggctgaccttctgggcttcgctgggcccctctgtatc
tctggcatcgtccatcacatcagcaaggacaaccgcaccatacagcccccgataaagctg
ctgggggtctactttatctcctctcaagagttcttggcgaatgcctacgtgctagccgtg
ctgctgttcttcgccctcatcctgcagagaaccttcctccaggcctcgtattatgtggct
attgagaccggcattaatttacgaggggctatacagactaagatctacaataagatcatg
cggctgtgcacctccaacatgtccatgggagaactgaccgtaggacagatttgtaacctg
gtggccatagataccaaccagctcatgtggttcttcttcctctgtcccaacctgtgggcc
atgccagtccagatcattgtgggggtgattctactctactacctcctggggatcagtgcc
ttgatcggggccacagtcatcgctgtcctggcccctgtccagtactttgtggccaccaag
ctgtcccaagcacagaagagcactctggagtactccagtgagcggttgaagaagaccaat
gagttgctgcggggaatcaagctgctgaagctgtacgcctgggaacacatcttctgtcac
agtgtagaggagaccaggggcaaggagctcaccagtctgcagacctttgccctatatacg
tccatatctatattcatgaacgcagccatccctatcgcagctgtcctgaccacgtttgtg
gtccatgtgcacatctctgaggaggctgacctgtcccctgctgtagcctttgcctccttg
tccctgttccacatcctggtcactcctctcttcctgctctccagtgtggtacggtccacg
gtcaaggccctggtcagtgcccagaagctgagtgagttcttcagtagtgatgagattgga
gatgagcaagagccaaatgctaccatgcccacgggccctagcaaccacgaaaccattccc
tccggccccagaaaccacaacaacaagtaccaggcagtgcctctgaaggtggtgaacagg
aagagacatcccagggacgattggaacaactacagccatgagggaggcaacccacccccc
caggagggagaccaagacctctgcatcaggataaccagtggatatttcacttggacagat
gggactcccaccctgtctaacgtaaacatcaaggttccctttggtcagctgactatgatc
gtgggccaggtgggttgcgggaagtcgtccctgttgctggcagctctgggagaaatgcag
agagtctctgggactgtcacctggaacattttgcccagcctggactcagagggagatgac
agccccacatcagacaaagatgctgctgatgatggagatatccagaagagaggctctgtg
gcctacgcttcccagaagccctggctgctcaatgcgacgctagtggagaacatcaccttc
gaaatgcccatgatcaaacccaggtacaaggctgtcattgaggcgtgttccctgcagccg
gatattgacatcctgccacagggagaccagacggagattggagagaggggtataattctg
tcaggagggcaacgccagcgtataggtgtagccagagccctgtaccaacagaccaatgtg
gtcttactggatgacccgttctcagcgctggacattcacctgagtgaccacctgatgcag
gagggcatccgcaaactgctgagagaagagaagaggaccgtggtgctggtcactcacaaa
ctacagtacctaccacatgctgactggatcatagcgatgaaggacggcaccattcagacc
gaggggactctaaaagacatccagaactctgatcctaagctgtttgaacagtggaagacc
ctgatgcaccggcaggacggggagtttgagaaggagacagtggctgagagtatgacggtg
ttggagcgtaagaacctgcggagggcgatgtactccaaggaagcttccaagactgaggag
gagcacgaagaagagtctgtggaaagtgaggaggatgacagcctgtcccaggccatgcgt
caccgcaccaccatcccctggcgctcctgtggggtctacctgtcctctgcagggctcctc
ctgccgctgctcctcctatcacagctcttcaaacacaccctcatggttgccatcgactac
tggctggcccactggacctcccacgtcatcactgccaagatggacgccaccgggagaaac
tgcaccgtcgctcaggagtgtggtttcagccactcgtggtacctgtcagtgttcagtgtg
ctgtgctgtctgggcatcgttctgtgtctggtcacctctgtggctgtagagtggacaggc
ctgagagtggccaaagaactacaccacaacctgctcagcaagatcatactggcacctatg
aggctgtttgagaccactcccctgggtaacatcctcaacaggttctcctctgacaccaac
accatagaccagcatatccctgccaccctggagtgtctgagtcgctccaccctgctgtgt
gtgtcggcgctgggggttatctcctatgtgacccctctgttcctcattgccctggtgccc
ctggccatcgcctgctacttcatacagaagtacttccgggttgcctccagggacctccag
cagttggaggatagtacccagctccctctcctgtcccacttctcagagacagtggagggc
ctcaccaccatccgggcattcaggtacgagtccaggttcagacagaggttattggagtat
actgatgccaacaacatcgcatctctcttcctcacagcagccaatcgctggctagaggtc
cgcatggactatgtaggagcctgtgttgttctgatagcagccgtggcctccatcagcaac
tctctgtacgaccacctctccactggcctggtgggactaggactcacctacgcactcatg
gtatccaactacctgaactggatggtgcggaacctggcagacatggaggttcagctgggt
tcagtcaagaggatcaacggcctgctgaagactgagcctgagaactacgagggactgatg
gctgcatctcaggtgccggatggctggccacggcaaggagagattcagatccagaacctg
agtgtgcgttacgacaccaccctgaaacctgtcctcaaacaagtcaacgcacacatcagc
cctggacagaaggttgggatctgtggtaggacaggaagtgggaagtcttctttctccttg
gccttcttccgcatggtcgacatgttcgaggggcgtatcatcatagatgacattgacatc
gccaagctgcctctgcagactctgaggtctagattctccatcatcctccaggaccccatc
ttattcagcggaaccatccggtttaacctggacccagagatgaaggctacagacgatatg
ctgtgggaggctctggagatcgctcagctcaaacctgtagtcaagactttaccaggagga
ctggacgccatggtgacggagggaggggagaacttcagccagggccagagacagctcttc
tgtctggccagagccttcgtcaggaagtctagcatcctcatcatggatgaagccacagcc
tctatagacatggccacggagagcatccttcagaaggtggtgatgactgccttcgctgac
agaacagtggttaccatagcacatcgtgtccacaccatcctgaatgcagacctggtgata
gtgatgaagagagggatcattctagaatacgacagaccccaggcactgctggagaaagag
gacagcgtcttttcagcattcgtcaaggcggacaagtga
DBGET
integrated database retrieval system
