Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139407613
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Entry
139407613 CDS
T10872
Name
(RefSeq) vesicle-trafficking protein SEC22b-B-like
KO
K08517
vesicle transport protein SEC22
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04130
SNARE interactions in vesicular transport
ocla04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
139407613
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139407613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139407613
Membrane trafficking [BR:
ocla04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
139407613
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
139407613
NCBI-ProteinID:
XP_071007543
LinkDB
All DBs
Position
4:20292669..20300592
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AA seq
215 aa
AA seq
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MVLLTMIARLADGLPLAASMQEDEQLGRDLQQYQSQAKQLFRKLNDQSPTRCTLEAGSMS
FHYVIEKGVVYLVLSEASFHKKLAFAYLEDLQAEFHEQHGKKVPTVSRPYSFIEFDTYIQ
KTKKSYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKASNLSSLSKKY
RSDAKYLNTRSTYAKLAAGGVFFIMLIVYVRFWWL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgctgacaatgatcgctcggttggctgatggactgccgctggccgcatcaatg
caagaggacgaacagttgggtcgggacctgcaacagtaccagagccaggctaaacagctg
ttcaggaaactcaatgaccagagtcccacacgttgcacattagaggctggctccatgtcc
ttccactacgtcatagaaaaaggagtggtctacctagtgctgtctgaagcaagctttcac
aaaaaacttgcctttgcttacctggaagacctgcaggcagagttccatgaacagcacggg
aagaaggtccccactgtgtcccgaccgtactccttcattgagtttgacacctacattcag
aagaccaagaagtcgtacatagacagccgagcccgcaggaacctgggcagcatcaacaca
gagctgcaggatgtccagaggatcatggtggccaacattgaggaagtgttgcaacgaggg
gaggccttgtctgctctggactccaaggccagtaatctgtccagcctgtcgaagaagtac
agaagtgacgccaagtacctgaacactcgctccacctatgctaagctggctgccggaggg
gtcttcttcatcatgctcatcgtctatgtccgcttctggtggctctga
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