Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139407631
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Entry
139407631 CDS
T10872
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E-like
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139407631
04020 Calcium signaling pathway
139407631
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139407631
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
139407631
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
139407631
NCBI-ProteinID:
XP_071007564
LinkDB
All DBs
Position
4:complement(24054419..24193209)
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AA seq
2498 aa
AA seq
DB search
MLELGSCSVSAQTLADHNALGVPQLARVGVSGSSTPHRYIFHPESENWHKDRLGLATGSH
SCSLMEPQSLSDSLLSHTAIIDTLYLPHNAHAPRGLSLDVDSSYNGVEGVLGMDPDRPVS
PIVIKRRRGGLIEQRDIVKAHQAHKIQSTPQALRKEWEMSRFGDNVPAMLGSGDGGSKRN
RTREGAPVSTGGGVSPAFKQTKAQRARTMALYNPIPVRQNCFTVNRSLFIFGEDNIVRKY
AKKVIEWPPFEYMILATIIANCIVLALEQHLPGEDKTPMSKRLEKTEPYFIGMFCFEAGI
KVVALGFVFHKGSYLRNGWNVMDFIVVLSGILATAGAHMNIPVDLRTLRAVRVLRPLKLV
SGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHSTCLPMPNILENE
TVDKSESEFPCGVRKCPDKYTCHDTWIGPNDGITQFDNILFAVLTVFQCITMEGWTTVLY
NTNDALGPTWNCMYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQI
ERELNGYRAWIDKAEEVMLAEDNKNSGPSALDAPTRLSEWNTSGNHVLKRATIKRREERR
GLDQQYGDISSVGIPMTRASIRSAKRGPTAYLKRKERLLRISLRRMVKTHIFYWTVLGLV
ALNTLCVAIVHHNQPHWLSVFLYYAEFLFLGLFLTEMCLKMYSLGPRLYFHSAFNRFDCG
VIVGSIFEVMWGFFRPGMSFGISVLRALRLLRIFKITKYWASLRNLVVSLMNSMKSIISL
IFLLFLFILVFALLGMQLFGGRFIFEDYTPTNFDTFPAAIMTVFQILTGEDWNEVMYNGI
RSQGGVKSGMWSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEDEEAAFNQKH
ALQKAKEVGAMSSLMSSDRRRRPYLYRKRAIHRSRPAYSLEEAESLAEGPPCPPLNSSNS
FMSRRERSRRMTMSVWEQRTSQLRRHRQMSSREILFSNPSEEQEAPPGCPHHLKATGTPT
GSLKLADPTADPKDFTAKPPKPMEMPLEEPALSMGVPEPHLSSPLPEPPDPTDTPLPDPP
TSTAVFIPEPTESEPCPEGKRGIPNHCHQGFNGRRSPWLNGERRQRAVRKFRPPAGDTLT
TDMEGMRLRRPQGTGHCEAQAGARGLDSPQAEGSSRSVSMERKTPEDPVEEVRKDGNKGE
TSQPSKTREAEHRQRDHDQTGGPELQNREEGLQSDPPTLQPSQAAVLALPEGPTGDSETD
SNATTLNQSPLSSSIVIEVTDVQLSLELTPITGNSKDVEASKPEKNEEEVANPVNTVTPD
SMFIFKPDNPIRRACHYVVNLRYFEMCILLVIAASSIALAAEDPVSATSDWNKVLRYFDY
VFTGVFTFEMIIKMIDQGLILHDGSYFRDLWNILDFIVVVGALVAFALTNNKGRDIKTIK
SLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKF
FYCTDGSKDTEKDCQGFYINYEKDKQEVKRREWRRHDFHYDNIVWALLTLFTVSTGEGWP
QVLQHSVDVTEEDRGPSQGNRMEMSIFYVIYFVVFPFFFVNIFVALIIITFQEQGDKMME
ECSLEKNERACIDFAISAKPLTRYMPQNRQTFQYRLWHFVVSPSFEYTVLAMIALNTIVL
MMKYYSAPPVYEAVLKHLNTAFTVLFSVECVLKIMAFGFLNYFRDTWNIFDFITVLGSIT
EIVVDLQSIETFNMGFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLF
FIYAIIGMQVFGNIRLDEETHINQHNNFKTFFGALMLLFRSATGESWQEIMLSCLGGQKC
EPDPLALTSDHEERCGTEFAYFYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPH
HLDEFVRIWGEYDRAACGRIHYTDMYEMLTDMSPPLGLGKKCPSKVAYKRLVLMNMPVDE
EMSVHFTSTLMALIRTALEVKIARGGEDRGQMDSDLQKEISIIWPHLSQKMLDLLVPIHK
ANHMTIGKIYAAMMIMDYYKQSKAKKLRQQLEEQKHAPMFQRMDASSLPQDILCSAKALP
FLTHSAGSALTRGGFVALSPISPQEMFMQPMSQDLEDKEEDYHHYHHHHHQLHTLVPERK
EFNRILCPTNRQDAPLKVPGWAVSIRASSMPQLAVDTQVGTDSSKLMKRSFSTIGDQCVN
GLWQEEYSLERVSSDRLYRPRQRSIRGIRSNLREPVDQERGRSKERRHLLSPDVSRCNSE
ERGQDPSQERKQSRSPSEGHAHVHHRQGNTSGSPGPSNSESSTLSGRRQLPQTPSRPRPH
ISYSPLICRAHPSPLAVSEGGAQTQEDPGETEEPLWREEGERPAQVAGGGSGVGVVVGVS
DPGLGVSHPHPSPHRYISEPYLPLHEEFHSPDSSGLEETLTFEVAIATSLGRANTISSAP
QLRHNWQVPNGHFHKRLGQASSVAACELLCDTDEDDRC
NT seq
7497 nt
NT seq
+upstream
nt +downstream
nt
atgttggaattgggctcctgttcagtcagcgctcagaccctggcggaccacaatgctctt
ggggtgccccagctggccagggtgggggtgtcagggagcagcaccccacaccgctacatt
tttcaccccgagtcagagaactggcacaaggaccgtcttggcctggccaccggctcccac
tcctgctccctaatggaaccccagagcctgtcagacagcctgctctcccacacagccatc
atcgacactctctacctcccccacaatgcccatgccccccgtggcctctccctggatgtg
gacagctcctacaacggggtcgagggagtgctggggatggaccccgaccggcccgtcagt
cccatcgtcattaagcgccgccgggggggcctcatcgagcagcgggacatcgttaaggcc
caccaggctcacaagatccagagcaccccacaagccctgcgcaaggaatgggaaatgtcc
cggttcggagacaacgttcccgccatgttgggctccggggatgggggctccaagcgcaac
aggacccgggagggagcgcctgtatctacaggtggtggagtttccccagcctttaaacag
accaaagcgcagagagctcgcaccatggccctgtacaaccccatccctgtcagacagaac
tgtttcaccgtcaatagatcactcttcattttcggggaggacaacattgttcggaagtac
gcaaagaaggtcatagagtggcctccgtttgagtacatgatcctcgccaccatcatcgcc
aactgtatcgtcctggccctggagcagcacctgcctggagaggacaagacccccatgtct
aagagactggaaaagacagagccttacttcattgggatgttctgctttgaagctgggatt
aaagtggtggcattgggatttgtattccataaaggctcctacctgagaaatggctggaac
gtcatggatttcattgtggttctgagtgggattctggccacagcgggagctcacatgaac
atcccagtggacctgcggaccctgagggccgtccgtgtgctcagacccctcaaactggtc
tctggaatccccagcctgcagatagtcctgaaatctatcatgaaagccatggtgccgctg
ctccagattggcctgttgctcttcttcgccattctcatgtttgccatcatcggcctggag
ttctacagcgggaagctccacagcacctgtctgcccatgcccaatatcctagagaatgag
acggtggacaagtctgagtcagagttcccgtgtggggtaaggaagtgccctgacaagtac
acctgccatgacacctggatcggccccaacgacggcatcacccagtttgacaacatcctc
tttgctgtgctcactgtcttccagtgcatcaccatggagggctggaccaccgtgctctac
aacaccaatgatgctttaggccccacttggaactgcatgtacttcatccctctgataatc
attggctccttcttcgtgttgaacctggtattgggagtgctctcaggagagtttgccaaa
gagagggagcgggttgagaaccgcagggcgttcatgaagctgcggaggcaacagcagatt
gagagggaactcaatggctaccgggcctggattgacaaagcagaggaggtgatgcttgca
gaggataataagaattcaggaccgtctgctcttgatgctcccacgaggctgtctgaatgg
aatacaagcggtaaccatgtgctgaagagggccacaatcaagaggagagaggagaggaga
ggactggaccagcagtatggtgacatctcttctgtgggcatcccgatgaccagagccagc
atcaggagtgctaagagaggacccaccgcttatttgaagcgtaaggagcgtctgctgcgg
atctctctccgccgcatggtgaagacacacatcttctactggaccgtactgggcctggtg
gccctcaacacactctgtgttgccatcgtccatcacaaccaaccccactggctgtctgtg
ttcctctactatgcagagttcctctttctgggtctgtttctcactgaaatgtgtttaaag
atgtacagcctgggacccagactctacttccactccgccttcaatcgcttcgactgcggg
gtgatagtgggaagcatctttgaggtgatgtggggattcttcaggcctggcatgtccttt
ggcatcagtgtgctgcgtgcgctccgtctgctgaggatattcaagatcaccaagtactgg
gcgtcgctgaggaacctggtggtatccctgatgaattctatgaaatcaatcatcagcctc
attttcctcctcttcctcttcatcctggtctttgctctgctgggcatgcagctctttggt
ggcaggttcatctttgaagactacactcctacaaactttgatacttttcctgcagccatc
atgactgtatttcagattctgacaggagaagactggaatgaggtgatgtacaatgggatc
cgctcccagggaggagtgaagtcaggaatgtggtcctccatatacttcattgtactcaca
ctctttggtaactacacgctgttgaatgttttcttggccatcgctgtggacaatctggcc
aatgcccaggaactaaccaaggatgaagaggacgaagaggctgctttcaatcagaaacat
gctctccagaaagcaaaggaagtaggggccatgtcttccctgatgtcatcagacaggagg
aggagaccctacctgtataggaaaagagcgatacacaggagccggcctgcctactctctg
gaggaggctgagagcctcgccgaagggcccccatgcccgccactgaattcctctaactct
ttcatgtccaggagggagaggagtagacggatgaccatgtctgtgtgggagcagagaacc
agccaactgcgcaggcaccggcagatgtccagccgagagattctcttcagcaaccccagt
gaggagcaggaagcgccccctggctgtccccaccacctcaaagcaacaggcacacccaca
ggcagcctgaagctggctgatcccacggctgaccctaaggacttcacagctaagccccca
aagcccatggagatgcccctagaggaaccagccctgtccatgggtgtccctgagccccac
ttatccagccctttaccagagccacccgatcccactgacacgcccctgcctgaccccccc
acgtccacagctgtgttcataccggagcctacagaatctgagccatgcccagagggcaag
cgtggcatccccaaccactgccaccaaggcttcaatggccgcaggagcccctggttgaat
ggggagagaaggcagagagcggtgcgtaagttccgccctcctgctggtgacaccctgacc
actgacatggaaggcatgaggctcaggaggccacagggcacagggcattgtgaggctcag
gctggggccagaggcctggactcacctcaggcggagggcagcagtcgctctgtcagcatg
gagaggaagaccccagaggacccagtggaggaggtgaggaaagacggtaacaagggagaa
accagccaaccttccaagaccagggaggctgaacacagacagagggaccatgatcagact
gggggtcctgagctgcagaacagggaggagggtctacagtcagatccacccaccctgcag
ccatctcaggctgcagttctggcgctaccagagggccccacaggagacagtgagaccgat
agcaatgccaccactctgaaccagtcccctctgagttccagtatcgtcatcgaggtgacc
gatgtccagttgtcactagagctcacccccatcacaggcaacagtaaagatgtggaggcg
tccaagcctgagaagaacgaggaagaggtggccaacccagtcaatactgtcacacctgac
agtatgttcatcttcaaacctgacaatccgatccgccgggcctgtcactatgtggtgaac
ctgcgttactttgagatgtgcatcctgctggtgatcgctgccagcagtatcgccctcgct
gcagaggaccccgtttcagccacctccgactggaacaaagttttgcgttactttgactac
gtgttcacaggtgtctttacctttgaaatgataataaagatgatagaccagggcttgatt
ctccatgacggctcctacttccgggacctgtggaacattctagactttatcgtggtggtc
ggagctctggttgccttcgccctcacaaataataaaggacgggacatcaaaaccatcaag
tctcttcgggtgctgcgcgtcctgaggcccctgaagaccatcaagagactaccgaaactc
aaggcagtgtttgactgtgtggtgacctctctgaagaacgtcttcaacatcctcatcgtc
tacaagctcttcatgttcatcttcgctgtcatcgctgtgcagctgttcaaggggaagttc
ttctactgcactgacggatccaaagacacagagaaggactgccagggcttctacatcaac
tatgagaaagacaagcaggaggtgaagaggagggagtggaggagacatgactttcactat
gacaatatagtctgggccctactcactctgttcaccgtctccactggggaaggctggcca
caggtcctgcagcactctgtggatgtgacagaggaggacagaggacccagccagggcaac
aggatggagatgtccatcttctatgtcatctactttgtggtcttccccttctttttcgtc
aacatatttgtggctctcatcatcatcaccttccaggagcagggagacaagatgatggag
gagtgcagcttggagaagaatgagagggcttgcattgactttgccataagtgccaaaccc
ctgacccgctacatgcctcagaacagacagacgttccagtaccgcctctggcactttgtg
gtctccccctcctttgagtacaccgtgctggccatgattgcactcaacaccattgtcctg
atgatgaagtattactcagccccaccagtgtacgaggctgtgctgaaacacctgaacaca
gccttcactgtgctcttctctgtggagtgtgtcctcaagatcatggcatttggctttctg
aactactttcgagacacttggaatatatttgacttcatcacggttttgggcagcatcaca
gaaatagtggtggacctgcagtcaattgagaccttcaacatgggtttcctgaagctgttc
cgagctgctcgactgatcaagctgttgaggcagggttacaccatccgcatcctgctctgg
acctttgtccagtcctttaaggctctcccctacgtctgtctgctcattgccatgctcttc
ttcatatatgcaatcatcggaatgcaggtttttggaaacatcagactggatgaagagact
cacatcaaccaacacaacaacttcaaaaccttctttggtgctctgatgttgctattcagg
agtgccacgggggagtcgtggcaggagatcatgctgtcatgtttaggggggcagaagtgt
gagccagaccccttagctctaacgtcagaccatgaggagcgctgtggaactgagtttgcc
tacttctactttgtttccttcatcttcttcagctcatttctgatgctgaatctgtttgtg
gctgtgatcatggacaactttgagtacctcacccgggattcttccatcttggggcctcat
catctggatgagtttgttcgtatctggggtgaatacgaccgagctgcttgcgggcgtatt
cattacactgacatgtacgagatgctgactgatatgtcgccacctcttggcctcggaaag
aaatgtccctccaaagtggcttataagaggctggtgctgatgaacatgcccgtggatgag
gagatgtctgttcacttcacctccaccctcatggccctgatccgaactgccctggaggtc
aagatagccagaggaggggaggacagggggcagatggattcagacctacagaaggagatc
agtatcatctggccacacctttctcagaagatgctagacctgcttgtccccatccacaaa
gccaatcatatgaccattgggaagatctacgcagctatgatgatcatggactactacaag
cagagcaaagccaagaagctcaggcaacagctggaggagcagaaacatgctcccatgttc
cagcgtatggacgcgtcctctctgcctcaggacatcctctgcagtgccaaagccctcccc
tttctgacccacagcgctggatctgccctgaccagaggagggtttgtggccttgagtccc
atctccccccaggagatgttcatgcagcccatgtcccaggaccttgaggataaagaggag
gactaccaccactatcaccaccaccaccaccagctccacactctggttccggagcgcaaa
gagtttaaccgcatcctttgccctactaacaggcaggatgccccactcaaggtgcccggg
tgggcagtctctatccgagcctcgtctatgcctcagctggctgtagacacacaggttggg
acggacagcagcaaattgatgaaacgctccttctccactattggtgatcagtgcgtaaat
gggctgtggcaggaggagtactctctggagagggtcagttctgaccgtctgtatagacca
cgacagaggagcatcagaggcatcaggtccaacctcagggaaccagtggatcaagagcgg
gggcgctccaaagagcggcgccacctgctgtctcccgacgtgtcccgctgcaactctgag
gagcggggccaggacccgtcacaggaacgcaagcagtcccgttcccccagcgagggacac
gcacatgtccaccatagacagggcaacacttcaggcagcccaggcccgtctaactctgag
tccagcaccctcagtggccgtcggcagctcccccagacgccatcgcggccacgccctcac
atctcctactcccccctgatatgccgagcccacccctcccccctggctgtcagcgagggt
ggagcccagacccaggaggaccctggagagacggaggagcccttgtggagggaggaaggg
gagaggccagcccaggtggcaggaggaggatcgggggtgggggtggtagtaggggtgagt
gacccaggattaggggtcagtcacccacatccctcccctcaccggtacatctcggagcca
tacctgcccctgcacgaggagttccacagcccagactcctcaggcctggaggagactctg
acctttgaggtggccattgcaaccagtctgggtcgggccaacaccatcagctctgccccc
cagctcagacacaactggcaggtccccaacggacacttccataaacgcctgggtcaggcc
agctctgtggccgcctgcgagctcctgtgtgacaccgacgaggatgaccgctgttag
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integrated database retrieval system
