Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139407650
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Entry
139407650 CDS
T10872
Name
(RefSeq) protein NDNF-like
KO
K25687
protein NDNF
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
139407650
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Gene cluster
GFIT
Motif
Pfam:
NDNF_C
NDNF
NDNF_N
fn3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
139407650
NCBI-ProteinID:
XP_071007589
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Position
4:complement(28335592..28346997)
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AA seq
572 aa
AA seq
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MRLDFGPQGWPLALALLLGVVVGQKLPTRDEGLFQMQIRDKTLFHDSSIIPDGAEISGYL
FRDTPKRYYFVVEEDNTPLSVTVTPCDAPLEWKLTLQELPEEASGEASGEPEPLDQQKQQ
QVTVDEGTELFSYKGNDVESYVATSSPSGLYQLEMLSTEKDSNFKVYATTTPASDQPYPE
LPYDPRVDITALGRTTVTLAWKPTPTGVLMGQPVQYCVVINKEHNFKSLCAAEAKISADD
AFMAAPKPGRDFSPFDFAHFGFVHSDNNLNRGLTSNKISRSYTAKPKASDIQKVCIGNKN
IFTVSDLKPDTQYYFDVFAVNSATNTSTAYVGTFARTKEEARQKTVELKDGKVSDVFIKR
KGSKFLRFAPVSSHQRVTLFVHACLDSVQVQVRRDGKLLLSQNVEGVRQFQLRGKPKAKY
LIRLRGSRKGASTLKVLATTKPSSKQPFPSLPEDTRIKAFDKLRTCSSATVAWLGTQDRN
KFCVYKKEVSESYGEEQRRREQNQCAGPETRRKSEKVLCKYFHSPNLQKAVTTETITGLE
PGKTYLLDVYAVGHSGHSVKYQSKLVKTRKYC
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggattttggacctcagggctggcctctggccctggctctactgctgggggtt
gtagtgggccagaagctgcccacgcgagacgagggcctgttccagatgcagatcagagac
aagaccctgttccatgattcctccatcatcccagacggagctgagatcagtggatacttg
ttcagggacacgcccaaaaggtactactttgtggtggaagaggacaacaccccactgtct
gtgacggtgacaccatgtgatgctcctctggagtggaagctaactctgcaggagctgcct
gaggaggccagtggagaggcatcaggtgagccagagcccctggaccagcagaagcagcag
caggtgacagtggatgagggcacagagctcttctcctacaaggggaacgatgtggagtcc
tacgtggccaccagctctccctccggcctctatcagctggagatgctctccacagagaag
gacagcaacttcaaggtgtacgctaccaccaccccagcgtctgaccagccctaccccgag
ctgccctacgatccccgggtggacatcaccgccctgggccggaccactgtcaccctggcc
tggaagcccacccctacaggcgttctgatgggccagcccgtccagtattgtgtggtcata
aacaaggagcacaatttcaagagcctgtgtgctgccgaggctaagatcagcgctgacgat
gccttcatggccgctccaaagccaggccgggacttcagccccttcgactttgctcacttt
ggctttgtccactcagacaataacttaaaccgaggtctcaccagcaacaagatctcccgc
tcctacacagccaaacccaaggcctctgacattcagaaagtctgcattggtaacaagaac
atcttcaccgtgtcggacctgaagccggacactcagtattactttgacgtgttcgctgtg
aactctgccaccaacaccagcaccgcctatgtgggcaccttcgcccgcaccaaagaggag
gctcggcagaagacggtggaactgaaggatggcaaagtgtccgacgtcttcatcaagagg
aagggcagtaagttcctgcgcttcgcccctgtttcctcccaccagagggtcactctgttt
gtacatgcctgtctggactctgttcaggtgcaggttaggcgtgatggcaagctgctgctc
tcccagaatgtggagggtgtacggcagttccagctgcgagggaagcccaaggccaagtac
ctgatccgtctgcgaggcagcaggaaaggagcgtccaccctgaaggtgctggccaccaca
aagcccagcagcaagcagcccttcccatcgctacccgaggacacacgtatcaaggccttc
gacaagctgcgtacctgctcctctgctactgtggcctggctgggaacgcaggaccgcaac
aagttctgcgtctacaaaaaagaggtgtccgagagctacggcgaggagcagcggcgccgt
gagcagaaccagtgtgccgggcccgagacgcgcaggaagtcagagaaggtcctctgcaag
tacttccacagcccaaacctgcagaaggccgttaccacggaaaccatcacagggctggag
ccgggcaagacctatctgctggacgtttatgctgtgggccacagtggtcactcagtcaaa
taccagagcaaactggtgaaaacgaggaagtactgctaa
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