Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139407677
Help
Entry
139407677 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase RNF138-like
KO
K10668
E3 ubiquitin-protein ligase RNF138 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139407677
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139407677
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139407677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_10
zf-RING_UBOX
zf-RING_5
zf-rbx1
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
Zn_ribbon_RlmA
DZR_2
Motif
Other DBs
NCBI-GeneID:
139407677
NCBI-ProteinID:
XP_071007623
LinkDB
All DBs
Position
4:35360500..35363783
Genome browser
AA seq
204 aa
AA seq
DB search
MAHSAAGLQTPSEDECPICMSPLMDPHHPAACSHVFCRLCLSRSLKWLPHCPLCRAKAQA
DDIMPAGATGVTVQTRTTVIRLDQPLSGLTRIYTPATRPVTGDIRSAAVRTFVCPICQES
GLNEQDLVGHCNDNHHYNNRPVVCPVCVSLPHGNPNQISRNFIRHLNLRHCYYAEDYTNI
HQTDTLNVQYAIFESLRDANLNPR
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggcccactctgcagcaggcctacagaccccatctgaggatgagtgtcccatctgtatg
agccccctgatggacccacatcaccctgctgcctgctctcatgtgttctgccgactatgt
ctctcgcgctctttaaagtggttaccccactgccctttgtgcagagctaaggcacaggct
gatgacataatgcctgctggtgccactggtgtcacagtccagacgaggaccacagtcatc
aggttggatcaacctctctctggcttgacgaggatttacaccccagcaactagacctgtg
acaggtgatatccggagtgctgcagtgaggacgtttgtctgtccgatctgccaggagagt
ggtctgaatgagcaggatctggtgggtcactgcaatgacaaccaccactataacaacagg
cccgtggtgtgtccggtgtgtgtctctctaccacacggtaacccaaaccaaatcagcagg
aacttcatcagacatttgaacctaagacactgttattatgctgaggactacacgaatatc
catcaaaccgatacgttgaacgtgcaatatgccatctttgagtctctccgagatgccaac
ctgaatccaagatga
DBGET
integrated database retrieval system
