Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139407727
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Entry
139407727 CDS
T10872
Name
(RefSeq) PR domain zinc finger protein 1-like
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139407727
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
139407727
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Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-C2H2_jaz
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-met
Zap1_zf1
Zf-C2H2_ZNF451
B129_C2H2-zf
Teflon_N
zf-BED
Motif
Other DBs
NCBI-GeneID:
139407727
NCBI-ProteinID:
XP_071007682
LinkDB
All DBs
Position
4:complement(54391154..54405230)
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AA seq
775 aa
AA seq
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MCGSSQGFTASSSSQNSTAMLTPDGSPFPHTTSVSTHTLTLTDSNLQDIDMTLWSEAEFQ
ERCTYILKDHPLHPGNHPENQTKAERSLPRNLVLKRCPDSAEVLGVTSRELIQKGTRFGP
LVGQTYSNDMVPKDANRKYFWRVFSEGRLHHILDGLDEEKSNWMRYVNPARRPEDQNLAA
CQTGMAIYFYTVRAVSPGQELLVWYCPEFAHRLNYPPPGELFTERIEQNNVRGKSSGKTG
HSMSEILRMEHTKPDPTCPRLPESALSSTCSPVLPLCPSVVYSSYPPIPYCGPPNPKRSL
SSRVSPHMHFPVKPSLGIPITAQHYTVSSLPGRMYPSSLCSPYLIPHFPLGINSLLPHTY
PQYSDRIAPHMPFPPHMLPFEVYPHVLRPSANVHKELLLALTTTPKNLSLPNGSRDLPLA
QTKSKKDLNCMPTNGCKHLGDHVPSPNNSLKNLPLTPTDNFSDPNQSSASSTFDDQPLPA
TSSMTTCLAPRGGSPLAGLTASSDYLPSKRTSTLLSSSHSAEEGAVDLRKARHGGRVIGY
KTLSYPLTRKNGKIRYECNICSKLFGQLSNLKVHLRVHSGERPFRCQTCSKDFTQLAHLQ
KHFLVHTGEKPHECQVCRKRFSSTSNLKTHLRLHSGEKPYQCKLCLARFTQYAHLKLHKR
LHTGERPYHCPHCLCAYLNYCSLQVHLQGFCPSGPKPSGPVPSVEELHRVNAAIEQFDLS
KAAERLEAMAAGAEAEKGNSSTSVLLQEMELGRKSSDHFNGANGNMSLVEGILCP
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctcctctcaaggcttcacagcctcctcttcctcccagaacagcacagccatg
ttaaccccagatggctccccctttccccacactacatcggtctccacccacaccctgacc
ctgaccgactcgaacctccaggacatagacatgaccctctggagtgaggccgagttccag
gagaggtgcacctacatcttgaaggaccacccgttgcacccgggtaaccacccagagaac
cagaccaaggctgagaggtctctaccccgaaacttggtcctgaaacgctgccctgactct
gcagaggtgcttggggtgaccagtcgggagctcattcagaaggggacacggttcggccct
ctggtgggccagacctacagcaatgacatggtgcccaaagatgccaacaggaagtacttc
tggagagtattctcagagggtcggttacatcacatcctggatggcttggacgaggagaag
agtaactggatgcgctacgtcaacccggcccgtcgtccagaggaccagaacctggcggcg
tgccagactggcatggccatctacttctacacggtgagagccgtgtcaccgggccaggag
ctgctggtgtggtactgcccggagttcgcccaccgtctcaactacccgccccccggagag
ctcttcacggagagaattgagcaaaacaatgttcgtggaaagagttcagggaagacgggg
cacagcatgtctgaaatcctgaggatggagcacaccaagcccgaccccacttgcccccga
ctccccgaatcggcactgtcctcaacctgcagccctgtcctacccctgtgcccctctgtg
gtctactccagctacccacccatcccgtactgtggcccccccaaccccaaaaggtccctc
agcagccgtgtcagcccccacatgcacttccctgtcaagcccagcctgggcatccccatc
acagcccaacattacacagtgtcgtcattgccaggtcgcatgtaccccagttcactatgc
agtccctacctcatacctcacttcccgcttggcattaacagcctactacctcacacatac
ccccagtacagtgacagaatagctcctcatatgccatttccacctcacatgctgcctttt
gaggtgtacccgcacgttctgcgcccatctgccaatgtacacaaagagctcctgcttgca
ctaaccactaccccaaaaaacctctcactgcccaatggcagcagagatctgccactcgca
cagaccaaaagcaaaaaagacctcaattgtatgccgaccaatgggtgcaaacaccttggg
gaccatgtgccttcaccaaataattccctcaaaaacctacctttgacaccaacggacaac
ttcagtgaccccaatcaatcatctgccagcagcactttcgatgaccagcctctaccagcc
acctcttccatgacaacctgcctcgcacccaggggaggctcaccgctggcgggcctgacc
gcctcttctgactacctcccctccaagcgcacatccaccctcctgagctccagtcacagt
gcagaggaaggggcagtggacctgcggaaggccaggcatggtggacgggtcatcgggtac
aagaccctgtcctacccgctcacacggaagaatgggaagatccggtacgagtgcaacatc
tgcagcaagctcttcggtcagctgtccaacctcaaggtccacctgcgcgtccacagtgga
gagcggcccttcaggtgtcagacctgcagtaaggacttcacccagctggcccacctgcag
aaacatttcctggttcacactggggagaagccacacgaatgccaggtgtgccgcaagcgt
tttagcagcaccagcaacctcaaaacccacctgcgtctccactcaggtgagaagccctat
cagtgtaagctgtgcttggcccgcttcacccagtatgctcacctcaagctccacaagcgc
ctgcacactggcgagcgcccctaccactgcccacactgcctatgcgcctacctcaattac
tgcagcctccaggtgcacctccagggtttctgcccctcaggacccaaaccctcaggccct
gttccctctgttgaggagctgcaccgtgtcaatgccgcgattgagcagttcgacctgagc
aaggctgcggaacgcctggaggcaatggcagctggagctgaggcggagaaggggaacagc
agcactagcgtcctgctgcaggagatggagttggggcggaagagctccgaccattttaac
ggcgccaatgggaatatgtcactagtcgagggaatcctctgtccttag
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