Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139407739
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Entry
139407739 CDS
T10872
Name
(RefSeq) transcription factor SOX-11b
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139407739
Transcription factors [BR:
ocla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
139407739
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
DUF3246
Motif
Other DBs
NCBI-GeneID:
139407739
NCBI-ProteinID:
XP_071007696
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Position
4:57762223..57764429
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AA seq
367 aa
AA seq
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MVQQTEHSETESSREATDTEESELMACSPVPLKSVKADWCKTATGHIKRPMNAFMVWSKV
ERRKIMELSPDMHNAEISKRLGKRWKLLKDSEKIPFIREAERLRLQHMADYPDYKYRPKK
KPKPDSSTKPAAQSPEKTNIKPVKAPGKKFAKLKTMKAVTTRPSHDPRYDYVFTSFTTSK
SVKIEYSDEDDDEEDYDEEVFSRIKMEEDEEPIPYNIAKVPASPTLSSTAESEGASMYEE
SRNANAAPTRLFYNFKNITKQNTICPASLSPASSFRSVSTSSSSSEDADDLLVDFSLNLA
SSAHGVELGTSNSGNLSLSLVDKDLDSFSEGSLSSHFEFPDYCTPELSEMIAGDWLDANF
SDLVFTY
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcaaacagaacacagtgagacagagagtagcagagaagctacagacactgag
gaaagcgaactgatggcgtgtagcccggtgccactgaaatccgtgaaagctgactggtgc
aagacagcaaccggccacatcaaacgacccatgaatgcatttatggtgtggtcgaaagtc
gagaggagaaagatcatggagctgtctccggacatgcacaacgcggaaatctccaaaaga
ctgggaaagcggtggaaattgttgaaggacagtgaaaagatcccgtttatcagggaagcc
gagaggctccggctacaacacatggctgactaccctgactacaagtaccgacccaagaag
aaaccaaagcctgacagttccacaaaaccagccgcgcaatcaccggagaagactaacatt
aaacccgtgaaagccccgggtaagaaattcgctaaattaaaaactatgaaggcggtgaca
acgagaccgtctcacgaccctcgttatgactatgttttcaccagttttacaactagcaaa
tctgtcaaaattgaatattctgatgaggatgacgacgaagaggactacgatgaggaagtg
ttctctaggattaaaatggaagaggacgaggaaccaataccgtacaacatcgccaaagtg
ccggcgagtcccactctgagctccactgcagagtctgagggtgcgagcatgtacgaggag
tcccggaatgcgaacgcagctcctaccagactgttctacaatttcaagaacattaccaag
cagaacacaatttgccctgcatcactctcaccagcatcttcattcaggtcggtctccacc
tcgtccagttccagcgaagacgccgatgacttactggttgacttcagtttaaatctagcc
tccagtgctcacggagtggagctggggacctcgaattcaggaaatctgtctctttccttg
gtggataaggacttggactctttcagtgagggcagccttagctctcactttgaattccca
gactattgcacccccgaattgagcgaaatgatcgcaggcgattggcttgacgctaacttt
tcagatttggtgtttacctactag
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