Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139407759
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Entry
139407759 CDS
T10872
Name
(RefSeq) cannabinoid receptor type 1A
KO
K04277
cannabinoid receptor 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139407759
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ocla04030
]
139407759
G protein-coupled receptors [BR:
ocla04030
]
Rhodopsin family
Others
Cannabinoid
139407759
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7tm_4
7TM_GPCR_Srx
T4SS_CagC
Motif
Other DBs
NCBI-GeneID:
139407759
NCBI-ProteinID:
XP_071007718
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Position
4:complement(60255524..60259725)
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AA seq
468 aa
AA seq
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MKSVLDGVADTTFRTITSGLQYLGSNDAIYDDTTINADFTKGGLSVQKPLSAFLSNSFPD
KVPGDEELILKGIPFFPTNATDLFGNRSGFGDEGTGIQCGENFMDMECFMILTPSQQLAV
AVMSLTLGTFTVLENLIVLCVILQSRTLRCRPSYHFIGSLAVADLLGSVIFVYSFLDFHV
FHRKDSPNVFLFKLGGVTASFTASVGSLFLTAIDRYISIHRPLAYRRIVTRTKAVIAFCV
MWTISIVFAVLPLLGWNCKQLNSVCSDIFPLIDEKYLMFWIGVTSVLVFFIIYAYMYILW
KAHHHAVRMLSRTSQKSLVVYSADGTKSQTMRPEQTRMDIRLAKTLVLILVVLVICWGPV
LAIMVYDLFWKMDDDIKTVFAFASMLCLLNSTVNPIIYALRSKDMRHAFLNSCQACRGSA
QQLDNSLESDCQNRHIAANRAAESCVKTTVKIAKVTMSVSTETSAEAV
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctgtgctagatggtgtggctgacaccaccttccggactataacctctggactg
cagtacctgggctccaacgatgccatctatgatgacaccaccatcaacgctgacttcact
aagggtggattgtccgttcagaagcctctctctgctttcctcagtaactctttcccagac
aaagtgcctggagatgaggaactcatcctcaaaggcatcccattcttccctaccaatgcc
acagacctgtttggcaaccggagtggctttggagatgagggaaccggaatccagtgtggg
gagaacttcatggatatggaatgcttcatgatccttacccctagccagcagctggctgtg
gcggtgatgtcactcaccctgggcaccttcacggtgttggagaaccttatcgtgctgtgt
gtgatactccaatcccgcaccctgcgctgccgcccctcctaccacttcataggcagcctg
gctgtagccgacctgctaggcagcgtcatcttcgtctacagctttctggacttccatgtg
ttccacagaaaagacagccccaatgtgttcctcttcaagctgggcggagtcaccgcctcg
ttcacagcctctgtgggaagcttgtttctcactgctatagaccgctacatttccatccac
aggcccctggcctacaggcgcatcgtcacgcggaccaaggctgtcatcgccttctgcgtg
atgtggactatctccattgtcttcgcagtgctccctctgctgggctggaactgcaagcag
ctcaactcggtctgctcagacatctttccgcttatcgacgagaagtacctgatgttctgg
atcggggtgactagtgtgctcgtcttcttcatcatctacgcctacatgtacatcctgtgg
aaggcccatcaccacgccgtgcgcatgctgagccgcacctcccagaagagcctggtggtg
tactcggcggatgggactaagtcgcagaccatgcgccctgagcagacgcgcatggacatc
cgcctggccaagacactggtcctcatcctggtggtgctggtcatctgctggggccctgtg
ctggccatcatggtctacgacctgttttggaagatggatgacgatattaagacagtgttt
gcttttgccagcatgctctgtctgctcaactcaaccgtcaatccaatcatttacgccctg
aggagcaaggacatgcgacacgccttcctaaactcatgccaggcgtgccggggcagtgcc
cagcagctggacaatagcctggagtctgactgccagaacaggcacattgctgccaacagg
gctgcagagagctgtgtgaagaccactgtgaaaatagccaaagtgaccatgtctgtctcc
actgagacatctgcagaagctgtctag
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