Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139407772
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Entry
139407772 CDS
T10872
Name
(RefSeq) liprin-beta-2-like
KO
K27096
liprin-beta
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139407772
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
139407772
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
FxsA
ATG14
SOGA1-2-like_CC
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
139407772
NCBI-ProteinID:
XP_071007736
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All DBs
Position
1:complement(44131699..44223206)
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AA seq
1066 aa
AA seq
DB search
MASDASHMLEAALEQMDDIIAGSKAAAEYTNGLFELGSPGSAGPLQVLQLVEDLRLALEL
QPREEERDTLRAQVPSSTAHMLMDWFDMDRYSERVSVNLCSPVNNESYQERLVRLEGDKE
SLVLQVSVLTDQVEAQGEKIRDLESSLEEHYHKLNSTEEMLKQELLSRTSLETQKLDLMD
EVSYLKLKLVDMDEEQNHNDSSENQQNKAECVVNLISELQEQMCRFQEEIHTRIMEKRAM
EAQGESGARKAYDQCPDVGLGGSDVEEFCCRCGGQNGFLQELRFLKSKVDELEGEKSQYE
KKLKATKSLLSKLSSLKLTVEHTQVEKQHWEERWRTAQAEIADLQQMLASKDSAIEGLQS
QLVSRGPMTNENPERVEEVYRRQLTDKYQELQRLKMGMESLVATNYEKDRHIEELTVLLG
QYRKMKEVMALTQGSSEKLLVGSSEEELSGSLKMRALTHKAHSDIIRSAMSSRGSSPLLV
SPSSFQKELDSSCRSIQTSLETSMVMVSQSDAGCFYSGEWSQPRMLSSSLEELQSGSLPK
HVVVGQPVEPVSENPHIEMNKYQTLPGKLSRPDMNEDREQHSTPDQLSPDDSEDSEFHLR
KSERLDESTLSDLSPLSSGVDSGQQSPVSPENKKNHRGIKKLWGKIRKTQSGSLQGEDLE
PGEFKRGGLRATAGPRLARAGETLTSVRDLKTPFSKWTPEQVCCWLEEYGLGQYVILARH
WADSGQTLLSASPQDLEKEMGIKNPLHRKKLQLALKSFSTKLTEKSSELDHIWVTRWLDD
IGLPQYKDQFHQGRVDGRMLQYLTVNNLLFLKVTSQLHHLSVKCAIHVLHVNKFNPNCLK
RRPGDENKTSPSEVVQWSNHRVMEWLRSVDLAEYAPNLRGSGVHGGLIILEPRFNSDTLA
MLLNIPPQKTLLRRHLATNFNMLVGSQAQQEKREFMESSGYTPLSTTAKVRPKKLGFSNF
GHLRKKRCDDSTDYICPLEAAQAQAQLQAVVNGAHRPYSGFRGLSPILDRDPDRREQMAV
TEGTVLQIEALSEGINQLTGFREERGAGAVPNIKGRPILVIRETTL
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagatgcaagtcacatgttggaggcggccttggagcaaatggatgacatcatt
gcaggctccaaggctgcagccgagtacaccaacggcctgtttgagctgggctccccgggc
agtgcgggacccctgcaggtgctgcagctggttgaggacctgaggctggccctggagctg
cagcccagagaggaggagagggacaccctgagggcccaggtccccagcagcaccgctcac
atgctcatggactggtttgacatggacaggtactcagaaagggtctcggttaacctctgc
tccccggtgaacaatgagagctatcaggagcggctggttcgcttagagggggacaaagag
tctctggtgctccaggtgagcgtgctcacagaccaagtggaggcccagggagagaagatc
cgagacctggagagctctctggaggagcactaccacaagctcaactccactgaggaaatg
ctaaagcaggagctgctgagccggacctcattggagacccagaaactggatctgatggat
gaggtttcctacctgaaactgaagctggtcgacatggacgaggaacagaaccacaacgac
agcagcgagaaccagcagaacaaagctgagtgtgtggtaaatctgattagcgagctccag
gagcagatgtgtaggtttcaggaggagatccatacccggatcatggagaaacgggccatg
gaggcccagggggagagtggtgcccgcaaggcatacgaccaatgccccgacgtgggcttg
ggtggctctgacgtggaggagttttgctgtcgctgtggaggacagaatggctttctgcaa
gaactccggtttctcaagagtaaagtggatgagctggagggggagaaatcgcagtatgag
aaaaaactaaaggccacaaagtcgctcttgtccaagctctctagcctgaagctcactgta
gagcacacgcaggtagagaagcagcactgggaggagcgatggcggaccgctcaggcggag
atagcagacctacagcagatgctggcttccaaagactctgcgattgagggcctacagagc
cagctagtctccagaggcccaatgaccaatgagaacccagagagagtagaggaggtgtat
aggagacagctgacagacaaataccaagaattgcaaaggttgaaaatggggatggagtct
ttggtagcaactaattatgagaaagaccgtcacatagaggagctgactgttctcctgggc
cagtacaggaagatgaaggaggtgatggccctcactcaagggtccagtgagaagctcctg
gttgggagcagtgaggaggaactgagtgggagtctgaagatgagggctctcacccataaa
gctcattcagacatcatccggtcagcgatgtcttctagaggctcctctcccctgttagtg
tctccctcgtccttccagaaagagctggactccagctgccgcagtatccagacctccctg
gagacgtcgatggtgatggtctcccagagtgatgctggttgcttctatagcggagaatgg
tcccaaccacggatgctttcaagtagcctggaggagttacaaagtggatcgttaccaaag
catgtcgtggtcggtcaaccagttgaaccggtttcagagaatccgcacatcgaaatgaac
aaatatcagaccctaccagggaagctgtctcgacctgacatgaacgaggatcgagagcag
cattctacgccagaccagctgtcccctgacgatagcgaggacagtgagtttcacctaaga
aagtcggagagactggatgagtccacactgtccgacttgtctcccctgtcgtctggagtg
gactcaggacagcagtcccctgtctctccagagaacaagaagaaccaccggggcatcaag
aagctctggggaaagataagaaagacacagtctggcagcctgcagggagaggaccttgag
cctggagagtttaagagggggggactgagagccaccgccggccctcgcctggcccgggcc
ggagagacattgacctctgtgcgggatctgaagacgcccttctccaagtggactccggag
caggtgtgttgctggctggaagagtatgggctgggccagtatgtgattctggcccgacac
tgggccgacagcgggcaaactctcctctctgcctcaccacaggatttagagaaggagatg
gggattaagaatccactgcacagaaagaagctgcagttggccctgaagtcgttcagcacc
aaactgacagagaaatcctctgaactggaccacatctgggtcacacgttggcttgatgac
attggtttacctcagtacaaggatcagtttcaccagggaagggtagacggcagaatgctt
cagtacttgacagtgaacaacctcttgttcctgaaagtgaccagtcagctccatcacctc
agtgtgaagtgtgctatccacgtcctccacgtcaacaagttcaaccccaactgcctgaag
agaaggcctggagatgagaacaagacgtctccctcggaggtggttcagtggtctaaccac
agggtgatggagtggcttcgctcggtggacttggcggagtacgctcccaacctgaggggc
agcggggtgcacgggggcctaatcattctggagcctcgttttaactcagacaccctggcc
atgctgctgaacatcccccctcagaagaccctgctgcgacgccacctggccaccaacttc
aacatgctggtgggctcccaggctcagcaggagaagagggagttcatggagtcgtctggc
tacactcccctcagcaccacagccaaagtcaggccaaagaagttgggcttctcaaacttc
ggccacctgaggaagaagagatgtgacgactcgactgactacatctgccccctggaggcg
gcccaggcccaggctcagctccaggcggtggtgaacggggcccaccggccctactccggc
tttaggggcctcagcccaatcctggacagagacccagacagacgagagcagatggcggtg
acagaggggaccgtactgcagatagaagctctttctgagggaataaaccaactcacaggt
ttcagagaggagagaggggctggagctgttccaaacatcaaaggcagacccatactggtc
ataagggaaaccaccctctga
DBGET
integrated database retrieval system
