Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408130
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Entry
139408130 CDS
T10872
Name
(RefSeq) receptor-type tyrosine-protein phosphatase beta-like isoform X1
KO
K05694
receptor-type tyrosine-protein phosphatase beta [EC:
3.1.3.48
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
139408130
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocla01009
]
139408130
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
139408130
Protein phosphatases and associated proteins [BR:
ocla01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
139408130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Y_phosphatase
Fn3_Dep-1_4th
PTP_tm
CysR_MRC2_N
Ricin_B_lectin
Tc-R-P
DSPc
Motif
Other DBs
NCBI-GeneID:
139408130
NCBI-ProteinID:
XP_071008003
LinkDB
All DBs
Position
1:47022693..47067964
Genome browser
AA seq
3106 aa
AA seq
DB search
MDTLFFLIFILFRCTSSNSFLIVHTPKKLCLSTHKTTVILGKCNVASPYQQWEWTNDMKL
HHTQSSKCLWANTSSAIPLHARLASIINCDSAHAWKCYDKQGTFGLAEEPMYLKKQGTRV
VIRGDPRYSNWTKHEEVDSGGGQVMTHLCSRKGSTTISTTRMYSSTHKPVAYTSTVHAIR
TAPVTAINTHSSSNAMSTHRRTTRQISTLRVPITTPNNAVTIESTVATHTYDLVKTQTLG
FIPRSVSTVITASGTALNNSHDFIWSSPALSTTDSAMDETVNAATENALLDSRNGAKIPS
VNQATSSSTPPNVDELVSTASTTTVVSSTISSVPNSSAMTDSPSTSASVVVTSDAKVPTS
VALTNPTPDSISNSSATTTPTDTTTLSTTRKVPPRKTVVPSTTKTTTMETTTTAAPPTPT
TSAVGQTTMTTANPIIKVTSPTTAIASPTITSTLPTTSSAPPTTSSTSPITFSTIKITAK
TTKKIAPPTTSTAPPTITSTLPTTSSAPPTTSSTSPITSSTPPTTPPITSTNAPPMTTTM
PPTTTTNLPTKTLATTTVTTTTATTSTTTATTPTTPATTPTTTTTTTPTTTTTTPTTTTP
TTTTTTPTTTKTTTTVTTTTATTPTTTATTPTTTATTPTTTTTTLPTTTPTTTTTTPLTT
TPTTTTTTPTTTKTTTTTSTSTTTTPNTTIAPLTTTKTTPTTTKTTPTSTTTTPTTTTTT
TSTTTIAPLTTTTTTPPTTKTTPTTTKTIPTTSTSTTTTPTTTTTPTTTIAPLTTTTTTL
PTTKTTPTTTTPTSTTTTTTPTTTTTTPPTTTTTPTTTTTTPTTTKTTPPSTTTTPTTTI
APLTTTTTPPPLTTTTPTTTTPPTTTATPTTTKTTPTSTTTTPTTTTTTTPTTAPLTTTT
TTPPTTKTTPTTTTSTTTTPTTTTNPTTTIAPLTTTTTTLPTTKTKTTPTTTTPTSTTTT
TTPTTTTTTPPTTTPTTTTTTPTTTKTTPTSTTTTPTTTIAPLTTTTTTTPTTTTTPPLT
TTTPPTTTATPTTTTTTPTTTPTTTTTTPTTTTTTTAPPTTATAPTTTTTVLTTTTELTT
TPQVETTEAVKCSFNLTKTSANTDSIALELITTGEACNFTVFYETSRSGITDCYQHGEYT
NVYICDIRDLEPGTLHQFEVISKNDGERGNVSVRTDPVGPSRLDVLPDQIQATQYKSPIQ
GQGGSHGLHISWPRSRGQVDWYEVTLQDTKTGTSRSTRIMGTAATQSRFTALTPGTLYAL
SLVATAGNKTALPVLATAATAPSAVSGLQLSPSSSSLGVSWQPGPGRREGFRVLLREQQG
ALVRNVTLKSSVTSHTLDDLLPGTLYTVTVVTEAEGLQNAISKQAVTVPVAVTELFLENH
GSLDTLRASWVNARGGVDAYLVSLATLGSANQDRKLPPNATEVVFSGLTPGRPYQVTVRS
KVGEQTTEAVATGRTVPAKVSQLSMVGVIDGSTLKSTWLPPRGDWENYRVLLLNGTVALV
NETVSRLVRQYSFSVASLGLVPGRLYTAQVMVESGLFGNTAQCQGRLAPQPVQQLMVRHG
DETSLSVLWSRPAGVWDGYTVVLRQGDTVVSQRTLSRDARECTFNILMPGRQYAIAVTTN
SGGLNSSASVIGRTTPAQVTSLRVTNGGSTDSLQTQWERAAGELDSYRVLLIHDSSVIKN
ESTPAHTTAYSFLALKPGALYRVVVTTVRAGQVSRQSVAEGSTVPAAVGEVTVSNNGRMD
FLSVSWRPAQGDVDSYLVTLKDRERTVHTLVVSKSSPECVFKSLVSGRLYNISIVSRSGV
YENHTIVQERTQPSSVQNPTAIHSARDDYLKVYWRHAAGDFDYYQVVIKHNNIFHQNKTI
MKSQNECVFNGLVPGRLYTVIVSTWSGKYETSVSTDGRTFPAAVRSLALAGRGTEDLRVA
WLAALGDVDHYEVQLLFNDMKVFPPITLGSSAGACVLSSLTPGRLYKIHVSTFSGPNQRA
QFIEGRTVPSKVKNIHVSNNGQSNSLKISWTPGQGDVDSYSVSLSLDGPEGRMLETRPVP
KHPNQLGFNSLQPGQLYSVTVRSISGILLNNNTASGRTVPSAVTGLQADNRHTTCSIQVS
WQEARGVADGYSLQLLDDRGHLVTNSSQASSGSTPLQHHFDGLTPGKRYHVLVHTTSGGV
RSEGVTAEARTRPAAVSDLSIQANSSSSLSFHWSPPEGDLEGYDLYLYNGDDTLYDRRSG
QPNTLQVSFQGLRPGAPYRMVVLTRSGEQTNDSAIWARTVPAAVTSLQARSHPQAEELRV
SWERAEGELSGYLLSVYNPDGSQQAEEALGPDATEYAVPTLIPGRLYQAVILTRSGELTN
RATTQGRTAPRPPTSVSFGGVTNTSLELTWSGPAGSDYDDFDLQWEPRDHLSVFNPYHTR
TSGSRILKGLYPGRLYNFSLRTVSGAVGGVGEDGSPAYSLPIHKSIRTKPERVQYLHCRP
QNSTSISCSWGPPEADCDSYTIECLHQDSRTLVYSRRTGRDSTLYHITQLEPHKRYTVSI
KAISDSMTSEAAEDSVVTMIDRPPLPSLGTRVNNRAALITKNTIFFKFNCSWFSDINGAV
KFFTVVVTESENNENIQPEQHHPLPSYLDYKLNSSVKAYQTSYFPSRCTVGSDSETQSFA
ISLGTGMDTLGGACDHLQAQDREQDPDKHRDHPFCDGPLKPKTAYRLSVRAFTQLFDEEQ
SRYTPPLYTDTYLSLPLVTEAEPLSGVIEGISAGMFLIVMVVGVTALLICRQKVRKVSVQ
ERRVVRLSMRRERPTSGVHMGVRGNRRISSPVKIMHFESHYTKLQADSNYLLSEEYEDLK
DVGRNQPLDTALLPENRGKNRYNNILPYDLTRVKLSYVDDDPCSDYINASYIPGNNFRRE
YIATQGPLPGTKDDFWKMVWEQNVNNIVMVTQCVEKGRVKCDHYWPFDQEPLYYGDLIVQ
MLSESVLPEWTIREFKICSEDQLNYSRVVRQFHYTVWPDHGVPETTQSLIQFVRTVRDYV
NRTPGSGATVAHCSAGVGRTGTFISLDRVLQQLDTKDTVDIYGAVFDLRLHRSHMVQTEC
QYAYLHQCMRDVLRARKLRSEQENPLYPIYENVNPDPQRDMVYARR
NT seq
9321 nt
NT seq
+upstream
nt +downstream
nt
atggatactttgtttttcctaatatttatactttttcgatgtacttcgtcaaacagtttc
cttattgtgcacaccccaaagaaactgtgcctgtctacccacaaaacgaccgttatcctt
ggaaaatgcaatgtcgccagtccctatcaacaatgggaatggacgaacgatatgaagttg
catcacacgcagtcgtcgaagtgtctctgggccaacacgagcagtgcgatacctctgcac
gctcgcctggcctcaatcatcaactgtgacagcgcacatgcctggaaatgttacgacaaa
caggggactttcggcttagcggaggagcccatgtacctgaagaaacaaggtacacgcgtt
gtgattagaggagatccgaggtattccaactggacaaagcacgaagaagtcgactctgga
ggaggacaggtgatgacacatttatgctcgcgtaaagggtccaccaccatctcaaccacc
agaatgtattcatccacgcacaaaccggtggcatacaccagcactgtccacgccatccga
acggcccctgtaacagccataaacactcactcttcatcaaacgctatgagcacccatagg
aggaccacccgtcagatctctacgttaagagttcccatcacaacgcccaacaatgcggtg
accattgagtctacggtggcaacgcacacttatgacctcgtcaagactcagacgttgggt
ttcattcccaggtccgtctcaacggtcatcacggcatctgggacagctctcaacaacagc
catgattttatctggtccagtcctgctttgtccacaactgactctgccatggacgaaacg
gtgaacgctgccaccgaaaatgccctcctcgactcgaggaacggagccaagattccatca
gtaaaccaagcaacttccagttccacaccccctaatgtagatgagctggtgtcaactgcc
tctaccactactgtggtttcctctacaatttcctcagtgcccaactcaagtgctatgact
gattcaccatccacttctgcatccgtagtcgttacctctgatgctaaagtcccaacttct
gttgctttaactaaccctacccctgattccatctctaattcttctgctaccaccacacct
accgataccacaacattgtccacaactaggaaagtaccccccagaaagactgtggttcca
tctacaaccaaaaccacaacaatggagactacaacaaccgctgcccctcctactcctact
acttctgctgtcggccaaaccactatgactacagcaaatcccattataaaagtaacctca
cccacaaccgccatagcctcacccacaataacttcaactctgcccacaacctcctcagct
ccaccaacaacatcttcaacttcgcccataacattttcaacaataaagattacagctaaa
accacaaagaaaatagccccacccacaacctccacagccccacccacaataacttcaact
ctgcccacaacctcctcagctccaccaacaacatcttcaacttcgcccataacctcttca
actccacccacaacccctccaatcacatctacaaatgccccacccatgaccactacaatg
cctcccacaactacaacaaacctgcctaccaagactttggccacaactactgtaaccaca
actactgcaaccacatccacaactaccgcaaccacacccacaactccagcaaccacaccc
acaactaccacaactaccacacccacaactactacaaccacacccacaactaccacaccc
acaactactacaaccacacccacaaccaccaaaaccacaactaccgtaaccacaactact
gcaaccacacccacaactactgcaaccacacccacaactactgcaaccacacccacaact
actacaaccacactcccaactaccacacccacaactactacaaccacacccttaactacc
acacccacaactactacaaccacacccacaactaccaaaaccacaactaccacatccact
tctaccacaaccactcccaacacaaccatagctccactcacaactaccaaaaccacaccc
acaactaccaaaaccacacccacttctactacaaccacacctactactaccaccacaacc
acatccaccacaaccatagctccactcacaactactacaaccacacccccaactaccaaa
accacacccacaactaccaaaaccatacccacaacttccacttctaccacaaccacacct
actaccacaaccactcccactacaaccatagctccactcacaactaccacaaccacactc
ccaactacgaaaaccacacccacaactaccacacccacttctaccacaacaacaaccaca
cccactactaccacaaccacacccccaactaccacaaccacacccacaactactacaacc
acacccacaactaccaaaaccacacccccttctaccacaaccacacccacaacaaccata
gctccactcacaactaccacaaccccacccccactcaccacaaccacacctaccacaacc
acacccccaactaccacagccacacccacaactaccaaaaccacacccacatctactaca
accacacctactactaccaccacaaccacacccaccacagctccactcacaactactaca
accacacccccaactaccaaaaccacacccacaactaccacttctaccacaaccacacct
actaccacaaccaatcccactacaaccatagctccactcacaactaccacaaccacactc
ccaactaccaaaaccaaaaccacacccacaactaccacacccacttctaccacaacaaca
accacacccactactaccacaaccacacccccaactaccacacccacaactactacaacc
acacccacaactaccaaaaccacacccacttctaccacaaccacacccactacaaccata
gctccactcacaactaccacaaccacaaccccaactaccacaaccacacccccactcacc
acaaccacacccccaactaccacagccacacccacaactactacaaccacacccacaact
acacccacaactaccacaaccacacccactactaccacaactaccacagccccacccaca
acagctacagctccaacaacaactactacagtactgactacgaccacagagttgaccacc
accccgcaggtcgagaccactgaggcagtaaagtgttcatttaacctgacaaaaaccagc
gctaatacggattctattgctctggaattgataacaacaggagaagcgtgtaacttcacc
gtgttttatgagactagtcggtccggcataacggattgttatcaacatggggagtacact
aatgtgtatatctgcgacataagggatttggaaccaggaacattacaccaattcgaagtt
atttcgaagaatgatggagagaggggcaacgtatcagtgcgtacagacccagtgggtcca
tccaggttggacgtactaccagaccagatccaagcaacccagtataagagtcctattcag
ggtcagggtggctcccatggcctgcacatatcctggcctcgatctcgtgggcaggtcgac
tggtatgaggtcacactacaggacaccaagacagggacgagccgcagtacccgcatcatg
ggaactgccgccactcagtctcgcttcaccgccctcacccctggaaccctctatgccctc
agcctggtggcaacggctgggaataaaacagccctgccagtgctggccactgcagccaca
gctccctcagctgtcagcggcctccagctctcaccctcctccagcagcttgggtgtttcc
tggcagcccggtccaggcaggagagagggtttcagggtgctactgagggagcagcagggc
gccctagtcaggaacgtcacccttaagagtagtgtcacctcccacacgcttgacgacctg
ttgcctgggaccctgtacaccgtcaccgtggtgactgaggctgaaggcctccagaacgcc
atctccaaacaagcagtcacagttcctgtggcggtaaccgagctcttcttggagaaccac
ggcagtctggacaccctgagggcctcctgggtcaatgctaggggcggcgtggatgcatac
ctggtctccctggcaaccctaggctcagccaaccaggataggaagcttccccccaacgcc
actgaagtggtcttcagcggcctgacccctggacggccctatcaggtgactgtgaggtca
aaggtcggagagcagacaactgaggcagtggccacaggcagaacagtgccagccaaggtg
tctcagctgtccatggtgggcgtcattgatggcagcactctgaagagtacatggttgccc
ccaagaggggactgggagaactatcgtgtcctgctactgaacggcacagtggctctagtc
aatgagacagtgagcaggctggttagacagtactccttctctgtagcttccttggggctg
gtgcctggcaggctctacacagctcaggtcatggtggagagcggtctgtttggcaacacc
gctcaatgtcaggggaggctagccccgcagcctgtccagcagctgatggtccgtcacggt
gatgagacgtctctgagcgtgctgtggtctcgccccgcgggggtgtgggacgggtacacc
gtggtcttgagacagggggacactgttgtgtcacagaggacactgtcccgtgacgccagg
gagtgcacattcaacatcctcatgcccggacgccagtacgccattgccgtcacgaccaac
agtgggggcctaaacagctcggcttcagtgattggacgaaccaccccggcgcaggtgacc
agtctgcgtgtgaccaacggtggcagcacagacagcctccaaacccagtgggagcgggcg
gccggcgagctggactcgtaccgtgtgctgcttatccacgacagcagtgtgatcaagaac
gagagcaccccggcccacaccacggcctacagcttcctggcgctgaagcctggagccctc
tacagggtggtggtcaccactgtcagggccggacaagtctccagacagagcgtggcagag
ggaagcacagtccctgctgccgtaggcgaggtgacagtcagtaacaacggtcgtatggac
ttcctcagtgtgtcgtggcgaccagcccaaggcgacgtggatagttacctggtcaccctg
aaggaccgcgagaggaccgtccacaccctggtcgtgtccaagtctagccctgagtgtgtg
ttcaagtccctggtgtctggacggctctataacatctccatcgtctcccgcagtggagtc
tacgaaaaccacaccatcgtgcaggaacgcacacagccctctagtgtccagaaccccaca
gcgatccactcggccagggatgactacctgaaggtgtactggcgccatgcggcaggggac
tttgactactaccaggtggtcatcaagcacaacaacatcttccaccagaacaagacgatt
atgaagagccagaacgagtgtgtgttcaacggcctggtgcccgggagactctacactgtc
atcgtcagcacctggagcgggaagtatgagaccagcgtgtccacggacggaaggaccttc
cctgcggcggtgagatcactagctctggctgggcggggcacggaggacctccgtgtcgcc
tggctggctgctctgggggatgtggatcactacgaggtgcagctcctcttcaacgacatg
aaggtgttcccgcccatcacgctgggcagcagcgcgggggcgtgtgtcctgtcctccctc
accccgggacgcctctataagatccacgtttccaccttcagcggacccaaccagagggcc
cagttcatagagggcaggacagttcccagcaaggtcaagaacatccacgtgagcaacaat
gggcagagcaacagcctgaagatcagctggaccccggggcagggtgacgtggacagctac
tctgtgtcgttgtcactggacgggccagagggacgcatgctggagacgcgacctgtaccc
aaacacccaaatcagctgggattcaactccctgcagcctgggcagctgtacagtgtgact
gtaaggtctatcagtggtatactgttgaacaacaacacggccagcggacgcaccgtcccc
tctgcagtgacgggcctgcaggctgacaacagacacaccacctgcagtattcaggtgagc
tggcaggaggcccggggagtggcggacggctacagcctgcagctgctggacgacagggga
cacctggtcaccaacagctcccaggcctcctctgggtccactccgctccagcaccacttt
gacggcctcaccccggggaagaggtaccacgtcctggtccacaccaccagcggaggggtc
cgcagtgagggggtcaccgctgaagcacgcacgcgtccggcagcggttagcgacctctcc
atccaggccaacagcagcagcagcctgtccttccactggtctcccccagagggagatttg
gaaggttacgacctctacctgtacaatggagacgacaccctgtacgaccggcgcagtggc
cagcctaacacgctgcaggtctccttccagggcctgaggcctggtgccccctacaggatg
gtggtgttaacacgcagcggagagcagaccaatgactcagctatctgggccaggactgtc
ccagctgcagtgacgtctctgcaggcccgaagtcatccccaggcggaggagctccgggtg
tcgtgggagcgtgcagagggggagctgagcggctacctgctgtctgtctacaacccagat
ggctcccagcaggcagaggaggctctagggcccgacgccacggagtatgccgtccccacg
ctgatccccgggcgcctctaccaagctgtcatcctcacccgcagtggagagctcacaaac
agggccaccactcagggcaggaccgcccccagaccccctacctctgtgtcattcggcggg
gtcaccaacacttccctggaactgacctggagtggtcctgcaggcagcgactacgatgac
tttgacctgcagtgggaaccgcgggaccacctgtctgtgttcaacccctaccacacccgg
acctccggcagccgcatccttaagggcctgtaccccggacgcttgtacaacttcagcctg
cgtactgtcagtggggctgttggtggtgttggtgaggatgggagccctgcctacagcctg
cccatccacaagagcatccgaaccaagccagagcgtgttcagtacctacactgccgcccc
cagaactccacctccatctcctgttcctggggccccccggaggccgactgtgactcctac
accattgagtgcctccaccaggactcccgcaccctggtgtactcccggcgtacgggccgc
gacagcaccctctaccacatcacccagctggagccgcacaaacgctacaccgtctccatc
aaggctatctccgacagcatgaccagcgaggccgctgaggatagcgtggtcaccatgatc
gaccgccctcccctcccttccctcggcacccgggttaacaacagggctgctctcatcacc
aaaaacaccatcttcttcaagtttaactgcagctggttcagtgacatcaacggagcagtc
aagttcttcacagtggtggtgaccgagtctgaaaacaatgaaaacattcaaccagagcag
caccaccctctaccctcctatctggactacaaattgaacagttccgtcaaggcctaccaa
accagctacttccccagccgctgcacagtgggatcagacagcgagacccagagctttgcg
atcagcctgggtacgggtatggacaccctcgggggggcatgtgaccacctacaggcccag
gacagggagcaggacccagacaaacacagagaccaccctttctgtgatggcccactcaaa
cccaaaactgcatacaggctcagtgtgcgtgcgttcacccagctttttgacgaggagcag
agcagatacaccccgcccctctacacagacacttacctgtccctccccctggtcacagaa
gcagagcccctgagcggtgtgatcgagggcatcagtgccggcatgttcctcattgtcatg
gtggtgggagtcactgcactgctcatctgcagacagaaagttcgcaaagttagtgtgcag
gagcggcgggtggtccgactgagcatgaggagggagaggcccacatcaggagtgcacatg
ggcgtcaggggtaaccgtcgtatttcaagccccgtcaagatcatgcactttgagtcccac
tacaccaaactccaggctgactccaattatctactgtctgaggagtacgaagacctgaaa
gacgtaggaaggaaccagcccctggacacagccctactgccagagaacagggggaagaac
cgatacaacaacatccttccctacgacttgacccgtgtgaagctgtcttatgtggatgat
gatccgtgctctgactacatcaacgccagctacattcctgggaacaacttccgtagggag
tacattgccactcagggcccacttcctggaaccaaggatgacttctggaagatggtgtgg
gagcagaatgtcaataacattgtcatggtgacgcagtgtgtggagaaaggcagggtgaag
tgtgatcactactggccctttgaccaggaacctttgtattatggagacctcatagtccag
atgctgtctgagtctgtgttgccagagtggactatccgggaattcaagatttgcagcgag
gaccagttgaactactccagggtggtgcgtcagttccactacacggtgtggcccgaccac
ggcgtcccagagaccacccagtcactcatccagtttgtcaggaccgtcagggactatgtc
aacaggacccctgggtctggggccaccgtagctcactgcagtgctggtgtgggccgtaca
gggactttcatatccctggacagagtcctgcagcagctggacacaaaggacacagtagac
atctacggagctgtcttcgacctgcgtctccaccgctcacacatggtgcagactgagtgc
cagtatgcgtatctccaccagtgtatgagagacgtcctccgagccaggaagcttcgcagt
gagcaggagaaccccctctaccccatctatgagaatgtcaaccctgacccccaaagagat
atggtgtatgccagacgttaa
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integrated database retrieval system
