Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408326
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Entry
139408326 CDS
T10872
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Enzymes [BR:
ocla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139408326
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Gene silencing
piRNA pathway
139408326
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GFIT
Other DBs
NCBI-GeneID:
139408326
NCBI-ProteinID:
XP_071008175
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Position
5:complement(10346744..10358953)
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AA seq
665 aa
AA seq
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MDNWDEVTTSNESGLSSWTSGGQSSSFGRPTDKVSSWNSGSGGFGGGRGKLFKINGSYWG
GNITGLSRGSRGGGGDFKSFSSGAGENGNEDKDSSWNSGGGFRGRGRGGGRGSRGGGIRN
GDDGNDGGFGGSQGGRGGRGGFRSGGGDGGGFGGGGYRGRDEEIFSKGSTMDGGGDGGNP
GPPKVTYVPEALCEKESSIFAHYESGINFDKYDDILVDVSGSNPPKAIMGFEEAALCESL
NRNISKSGYKKPTPVQKHGIPIIAAGRDLMACAQTGSGKTAAFLLPILQQLMVDGVTASQ
FSEIQEPEVIIVAPTRELINQIYMEARKFAHGTCVRPVVVYGGISTGHTIREILKGCNVL
CATPGRLMDIIGRGKIGLSKLRYLVLDEADRMLDMGFEPAMRKLVGSPGMPAKEDRQTLM
FSATYPEDIQKLAADFLKKDYLFLAVGVVGGACSDVEQVVVQVTKFSKRDQLLEVLKTTG
SERTMVFVETKRQADFIATFLCQEKVNTTSIHGDREQREREQALGDFRSGRCPVLVATSV
AARGLDIKDVQHIVNFDLPNNIDEYVHRIGRTGRCGNTGRAVCFFDPEADGNLARSLVKV
LSGAQQEVPKWLEEAAFSAHGTTGFNPGGRTFASTDSRKGGSFQRDGASHLAAALSSGAD
DDEWE
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggacaactgggatgaggttaccacaagtaatgaaagtggattgagctcgtggaccagt
ggtggccaaagttccagttttgggagaccgactgataaagtcagctcctggaacagtgga
agtggtggctttggtggcggcagaggcaagttatttaaaataaatggttcttattggggg
gggaatatcactggtctgagccgagggtccaggggaggtggtggagacttcaagagtttc
tcttcaggagctggtgagaatgggaatgaagataaagacagctcctggaacagtggtgga
ggcttcaggggaagaggcagagggggcggcagaggatcaaggggaggaggcatccgaaat
ggggatgatggcaatgacggcgggtttggaggtagccagggaggcagaggtggcagggga
ggcttccggtcaggtggtggtgatggtggaggatttggcggaggaggttatcgtggacga
gatgaagaaattttctctaaaggctcaaccatggatggtggtggagatggtggcaatcca
ggtcccccaaaggtgacctatgtgcccgaagccctctgtgagaaggagtcttctattttt
gctcattatgagtcaggcatcaactttgataagtacgatgacatcttggtcgatgtcagc
ggcagcaatccgccaaaggcaatcatgggttttgaagaggctgccctgtgtgaatctctg
aacaggaacatcagtaagtctggctataagaagcccaccccagtacagaagcatggcatt
cccatcatcgctgctggccgggacctcatggcctgtgcccagactggatctgggaaaacg
gctgcattcctactgcccatcctgcagcagctgatggtggacggcgtgacagctagtcag
ttcagcgagatccaggagccagaggttattatagtggccccaaccagggagctgatcaac
cagatctacatggaagccaggaagtttgcccatggaacttgtgtgcgtcctgtggtggtt
tacggtggcataagcaccggtcacaccattcgcgagatactgaagggctgcaatgtgctg
tgtgcgactccaggaagactgatggacattattggaagaggaaagattggcttgagcaag
ctgcgttacctggtgctggacgaggctgacaggatgctggacatgggctttgagcctgcg
atgcgcaagctggtggggtccccaggcatgccagctaaagaggatcgccagacccttatg
ttcagcgctacctaccccgaggacatccaaaaactggctgctgacttcctgaagaaggac
tatctgttccttgctgtgggtgtggtgggcggagcctgcagtgatgtggagcaggtcgtg
gttcaggtgaccaagttctccaaaagagaccaactactggaggtcctgaagactacaggg
tctgaacgcacaatggtctttgtggaaaccaagaggcaggctgactttatagcaacgttc
ctgtgtcaggagaaggttaatactactagtattcacggtgaccgtgagcagagggagcgt
gaacaggcgctcggcgacttccgctccggaaggtgtcctgtcctggtggccacctctgtt
gctgcccgaggactggacatcaaggatgtccaacacatagtcaactttgacctccccaac
aacattgatgagtacgtccaccgcatcgggagaacaggtcgctgtgggaacaccgggaga
gctgtgtgtttctttgacccggaggctgacggcaacctggcacgctccctggtcaaagtc
ctgtctggggcccagcaggaggtgcccaaatggctggaggaagctgccttcagtgctcat
ggcaccacagggttcaacccaggtggcagaacctttgcctctactgatagcaggaagggt
ggctctttccagagagatggggcaagtcatctagctgctgccctgagcagtggcgcagac
gacgacgaatgggagtga
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