Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408345
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Entry
139408345 CDS
T10872
Name
(RefSeq) lamin-B1
KO
K07611
lamin B
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04210
Apoptosis
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
139408345
09142 Cell motility
04820 Cytoskeleton in muscle cells
139408345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139408345
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
139408345
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GFIT
Motif
Pfam:
Filament
LTD
CENP-F_leu_zip
Myosin_tail_1
DUF1326
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
139408345
NCBI-ProteinID:
XP_071008207
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Position
5:11794507..11816452
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AA seq
588 aa
AA seq
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MATATSTPAGQRISTRSAAGSTPLSPTRISRLQEKEDLCNLNDRLAIYIDKVRSLESENS
VLHLQISEKEDVRTRELTGLKSLYETELADARRSLDDTAKERARLQIELGKIKSDHEQLL
QNFAKKESDAAGALARLRDMETQLNSKEAVLATTLSEKRALEASLADLQGTVQELDSGLI
FAKKQLGEETLLRIDLENRYQSLSEELEFRKNMFEEEIKETRSRHETRLVEVDSGRAVEY
EFKLAQALTEMRGQHDEQVKLYKDEMENTYVAKLENVRLSSEMNSSSASMAREELRESCL
RVESLAAQLASMQKETRGWQDRIHELESALAQERDTSRRMLGEKEREIAEIRAKMQMQLD
EYEQLLDVKLALDMEINAYRKLLEGEEERLKLSPSPSSRVTVSRAQSSSRSVRTARGKRK
RVDVEEQEASSSVSIAHSASTTGPVCIDELDTDGKFIRLHNTANENQAMVGYELTRTIGE
VSATYKFTPKYVLKAGQKVTVWAANAGVASNPPTDLVWKSQASWGTGEDVQVLLLNPQGE
EVARRSTSYKTAMEEDDDEDDEGVEVIEEDLFHQQGDPRASKRGCSIM
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgcaacttcaactccggccggccaaagaataagcacccgctccgccgccggt
agcactccattgagccccacgaggatatccaggttgcaggagaaagaggacctctgcaat
ttgaacgaccgtctagccatttatatcgacaaagtccggagtctagagtccgagaacagc
gttcttcacctgcagatttctgagaaggaagatgtaagaacccgggagcttactggtttg
aaatcactgtatgaaaccgagctcgctgacgctagaagatctctcgatgacaccgccaaa
gaacgcgcgaggttgcagattgaattgggaaagatcaaatccgaccatgagcagttattg
cagaactttgccaagaaggagtctgatgcggctggcgccctggcccggctcagggacatg
gagacccagctgaactcgaaggaagcggtgttggccaccacactgtcagagaagagggcc
ctggaagccagcctggctgacctgcagggaactgtccaggagttggattctggcctgatc
tttgccaagaagcagctgggagaggagactctgcttcgcatcgacctggagaaccgttac
cagagcctgtctgaggagctcgagttccgcaagaacatgttcgaggaggagatcaaggag
acaaggagtagacacgagactcgtctggtggaggtggactctggccgggctgtggagtac
gagttcaagctggcccaggccctgactgagatgagggggcagcacgacgagcaggtcaaa
ctgtacaaggatgagatggagaacacttacgtggccaagctggagaacgtgcgcctgtcg
tcggagatgaacagctcgtcggccagcatggcccgtgaggagctccgggagtcgtgcctg
cgtgtggagagcctagccgcccagctggccagcatgcagaaagagacccgtggatggcag
gaccggatccacgagctggagtcagccctggcccaggagagggacaccagccgcaggatg
ctgggggagaaagagcgggagatcgcggagatccgggccaaaatgcagatgcagctggac
gagtacgagcagctgctggatgtcaaattggccttggacatggagatcaatgcctacagg
aagctactggagggagaggaggagagactgaagctgtcccccagcccgtcgtcccgtgtc
accgtctcccgtgcccagtccagctctcgcagcgtgcgtaccgcccggggaaagagaaag
cgtgtggatgtggaagagcaggaggccagcagctccgtctccatcgcccactccgcctcc
accaccggcccagtgtgcattgatgagctcgacactgacgggaagttcatccgcctgcac
aacaccgccaatgagaaccaggccatggtgggctatgagctgaccaggaccatcggagaa
gtttctgccacctacaagtttactcccaaatatgtcttgaaggcaggccagaaagtcacg
gtgtgggcggccaatgcgggtgtggcctccaacccccccacagacttggtgtggaagagc
caggcgtcctggggcacaggggaggatgtccaggtgctgctgctcaaccctcagggagag
gaggtggccaggaggagcacctcgtacaagacagccatggaggaagatgatgatgaggat
gacgagggagtggaggtcattgaggaagatctcttccaccagcagggagacccacgtgcc
agcaagaggggttgctccataatgtga
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