Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408420
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Entry
139408420 CDS
T10872
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 20 isoform X1
KO
K11848
ubiquitin carboxyl-terminal hydrolase 20/33 [EC:
3.4.19.12
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139408420
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139408420
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
139408420
Peptidases and inhibitors [BR:
ocla01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
139408420
Ubiquitin system [BR:
ocla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
139408420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
DUSP
zf-UBP
UCH_1
FlhC
Motif
Other DBs
NCBI-GeneID:
139408420
NCBI-ProteinID:
XP_071008373
LinkDB
All DBs
Position
5:15501768..15524157
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AA seq
960 aa
AA seq
DB search
MSDLGDICPHLESIGEVTKEDLLQKSKGTCQLCVAGGPNLWACLQSECPYVGCGESFSDH
STLHAQTKKHSLTVNLTTFRIWCYVCEREVFLEQRPAVVSAMSATNTPHHCKAMDNQVRH
RTKDAFHQPVSHHRPLKAVPIAVAEEEGSESEEDDLKPRGLTGMKNIGNSCYMNAALQAL
SNCPPLTQFFLDCSGLVRTDKKPALCKSYQKLISELWHKKRPSYVVPTSLSQGIKLVNPM
FRGYAQQVGASSQQDTQEFLRCLMDQLHEELKEPLAEFGRGGEGDERRDGSDRSPAEDEF
LSCDSGASSDRGEGGGLGEAGLLIQDECGVSPRVGGGGTGTGGRSGTGGPISEKERLKEK
RVLGSPLHGGSQEMDEDADVDTAAAEKGALERGAEEEGTPPRPQSPSQSQTQGQMQSSNT
PEPDNEASMQQRPQSRPCSPVRMVQELQPKLSSSPPRSSTLRSAGPTYSFKKAQLILGAK
KKKQSLYRSVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSSIHQ
NIPAKTGVSLDVYGSQGWITYIMDSIRRFVVSCIPSWFWGPMVTLEDCLAAFFAADELKG
DNMYSCEKCRKLRNGVKYCKVLQLPEILCIHLKRFRHEVMYSFKINSHVAFPLEGLDLRP
FLAKDSLSQITTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQN
AEAYVLFYRKSSEESVRERQKVVALANMKEPSLLQFYISREWLNKFNTFTEPGPISNHTF
LCQHGGIPPNKYHYIDDLVVILPQNVWEYLYNSFGGGPAVNHLYVCAICQVEIEALVKRR
KVEIDTFIRLNKEFQAEEAPTVILCISMQWFREWENFVKGKDNEPPGPIDNSKIGVMKGG
HIQLKQRADYGQISEETWQYLLSIYGGGPETAVRQTVSAPALDTDSLHRERKIEAETRAL
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacctgggggacatttgtccccacctggaatccataggggaggtcaccaaggag
gaccttctgcagaaatccaagggaacctgccagttatgtgtagcaggaggacccaacctc
tgggcctgtcttcagagcgagtgtccatatgttggctgtggagaatccttttcagatcac
agcaccctacacgctcagactaagaaacacagcctgacagtaaacctgacaacattcagg
atctggtgctatgtgtgtgagagagaggtgtttctagagcagaggcctgcagtagtatct
gctatgtctgccactaacactccccaccactgtaaagctatggacaaccaggtacgccat
cgcacaaaggatgcatttcatcaaccagtgagtcaccaccgcccgttgaaggcggtgccc
atcgcggtggcagaagaagaggggtcagagtcggaggaggatgacctcaaacccagaggt
ctgacagggatgaagaatatcggtaactcctgctacatgaacgcagctcttcaagccctg
tccaactgtcctcctctcactcagttcttcctggactgcagtggactggtgcggacagac
aagaaacctgcgctgtgcaagagctaccagaaactaatctctgagctctggcacaagaaa
cggcccagttacgtggtccccaccagtttgtcccagggaatcaagctggtcaaccccatg
ttccgtggctacgcccagcaggtaggggcaagctcccagcaggatacccaggagtttctg
cgctgtctgatggaccagctccacgaggagctcaaggagccattggcagagttcggcagg
gggggtgagggggacgagcggagggacgggagcgaccgctcccccgccgaggacgagttc
ctctcctgcgactcaggtgccagcagcgaccggggagaaggaggagggctgggggaggcg
ggcctgctcatccaggacgagtgcggggtgtcaccgagggtgggaggaggggggacaggc
actggggggcgatcagggacaggaggacccatctcggagaaagagaggctgaaggagaag
agggttttgggctcgcccctccacggaggctcccaggagatggacgaggacgcagatgtg
gatacggcggcggccgagaagggggctctagagaggggggcggaggaggaggggaccccc
cctagaccacagagccccagtcagagtcaaacacaggggcagatgcagagcagcaacact
ccagagccagacaacgaggcatcgatgcagcagcgcccccagtctcgaccctgcagccct
gtccgtatggtccaggagctgcaaccaaaactctcctctagcccccctcgctctagcacc
ctccgctctgcagggcccacatactccttcaagaaagcccagctgatcctgggtgccaag
aagaagaaacagtctctctaccgcagtgtcatctcagacatatttgacggctccatcctc
agcctggtccagtgtctgacctgtgacagggtttcgaccactgtggagaccttccaggac
ctgtctctgcccatcccaggtaaggaggaccttgccaagctacactcctccatccaccag
aacatcccagccaagaccggggtctctctggacgtctacggctcccagggctggatcacc
tacatcatggactccatacgcaggtttgtggtgtcctgtatccccagctggttttggggc
cccatggtaacactggaggactgtcttgctgccttctttgctgctgatgagctcaaaggg
gacaacatgtacagctgtgaaaagtgtagaaaattgagaaatggtgttaaatattgcaaa
gtacttcagctacctgagattctgtgcattcacctgaagcgttttcgtcatgaggtgatg
tactccttcaagatcaacagtcacgtggccttcccattggagggactcgacctccgacct
ttcctggccaaggatagcctctcccagatcaccacttacgacctgctgtccgtcatctgt
caccatggcaccgcaggcagtggtcactacatagcgtactgtcagaatgtgatcaacggt
cagtggtatgagtttgatgaccagtatgtaacagaggtccatgagacggtggtgcagaat
gctgaggcctatgtgctcttctacaggaagagcagtgaggagtcagtgagggagaggcag
aaggttgtggctctagccaacatgaaggagcccagcctgctgcagttctacatctccaga
gagtggctcaacaagttcaacaccttcactgagccagggcccatcagcaaccacaccttt
ctctgccagcacggagggatcccacccaacaagtaccactatatagacgacctggtggtg
atcctgccgcagaatgtatgggagtacctgtacaacagttttggaggaggcccagcagtg
aaccacctgtacgtgtgtgctatctgccaggtggagatagaggctctggtcaaacgcaga
aaggtggaaatagacacctttatcaggttgaataaagagttccaggcggaggaggctcct
acagtcatcctgtgtatcagcatgcagtggttcagggagtgggagaacttcgtcaagggc
aaagacaacgaaccccctggtcctattgacaacagtaagattggtgtgatgaaaggggga
cacatacaactaaagcaaagggctgactatggtcagatctcagaggagacgtggcagtat
cttctcagtatctacggtggagggcctgagactgcagtgagacagacagtgtcggccccg
gccctcgacacagacagcctgcacagagagaggaagatagaggcagagaccagggcactc
tga
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