Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408457
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Entry
139408457 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase ARK2C-like isoform X1
KO
K17821
E3 ubiquitin-protein ligase RNF165 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139408457
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139408457
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139408457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
U-box_ZFPL1
zf-RING_Vps41
zf-RING_16
RINGv
Prok-RING_4
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
139408457
NCBI-ProteinID:
XP_071008475
LinkDB
All DBs
Position
5:complement(16690902..16709576)
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AA seq
346 aa
AA seq
DB search
MVLVHVGYLVLPVFGSVRNRGAQFTRHQHSHATSCRHFHLGAPQAPISAEFPLGHTSQPP
QTGLAPHQPPAPHHPPPLPAPPQFQDVTGPPFLPQALHQQYLIQQQLLEAQHRRILPHSR
RTLERAPLNPHRLRSGYDYSPPLHIPQPISQQPRYLAEGTDWDLSVDAGLSHQQYQLQQL
PQHYQHYLAASPRMHHFPRNTSSAQVVVHEIRNYPYPQLHLLALQGLNPSRHASAVRESY
EELLQLEDRLGSVSRGAVQTTIERFTFPHKYKKRKPLDMKIGEEGEETDVDEKCTICLSM
LEEAEDVRRLPCMHLFHQGCVDQWLATSRKCPICRVDIETQLHPDS
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggtgttagtacatgtcggatatttggttcttcccgtatttggctctgtaagaaataga
ggggcacaattcaccaggcatcagcacagccatgctacctcatgccgacacttccaccta
ggggcccctcaggcgcccatctcagctgagttccccttgggtcacaccagccaacccccc
cagactggcctggcccctcaccagcccccggccccccaccacccaccgcccctgccggcc
ccccctcagttccaggacgttactgggcctccgttcctacctcaggccttacaccagcaa
tacctcatccagcagcagcttctagaggcgcagcaccgcaggatcctcccacactccaga
cgaactctggagcgtgctcctctgaaccctcacagacttcgctcagggtacgactactcc
cctcccctccatatcccccagccaatcagccagcagccgcgctacctggccgagggcaca
gactgggaccttagtgtggacgctggcctctctcaccaacagtaccagctccagcagctt
ccacagcactatcagcattacctggcggcatcccccagaatgcaccactttcccaggaac
acctcgtctgcacaagtggttgtgcatgagattagaaactacccgtacccccagcttcac
ctgttggctctgcagggcctcaacccctcacgtcacgcttccgctgtacgagagagctat
gaggagctgttgcagcttgaagacaggttgggaagtgtcagtaggggagcggttcagacc
accatagagagattcaccttcccacacaaatacaagaagaggaagcctctggatatgaag
attggcgaggagggcgaggagactgatgtggatgagaaatgtaccatctgcctgtcgatg
ctagaggaggcagaggacgtcaggcgtttaccctgcatgcacctcttccaccagggctgt
gtggatcagtggctggcgaccagcaggaagtgtccaatctgccgcgtggacatcgagacg
cagctccacccagacagctga
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