Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408464
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Entry
139408464 CDS
T10872
Name
(RefSeq) electrogenic sodium bicarbonate cotransporter 1-like isoform X1
KO
K13575
solute carrier family 4 (sodium bicarbonate cotransporter), member 4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139408464
Transporters [BR:
ocla02000
]
Solute carrier family (SLC)
SLC4: Bicarbonate transporter
139408464
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GFIT
Motif
Pfam:
HCO3_cotransp
Band_3_cyto
PTS_EIIA_2
RWD
Motif
Other DBs
NCBI-GeneID:
139408464
NCBI-ProteinID:
XP_071008489
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Position
5:complement(17164928..17248809)
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AA seq
1135 aa
AA seq
DB search
MSTDKNKVEDEAVLDRGACFVKHVCDEEEVEGHHTVYIGVHVPKSYQRRRRHRRKSSHKE
RKGRPADNVEGDKSDGENADEAAPNILKPLISAAAERIRFILGEEDDGPPPPQLFTELDE
LLAVDGQEMEWKETARWIKFEEKVEKGGERWSKPHVATLSLHSLFELKTCIEKGTILLDL
EASTLPQVVELITDSQIEIGQLKPELKDQVMYTLLRKHRHQTKKSNLRSLADIGKTVSSA
SRLFSNQDQNARGLNEHPQPFPHLHTQSQPQSVPYATTLGHEEPIKEIQRSSSMQYISSP
ATAHRNLTSNSLNDFSDQPDRDQLKNKLMKKLPRDAEASNVLVGGVDFLDTPFVAFVRLQ
QAAMLGGLTEVPVPTRFLFVLLGPKSKAKSYHEIGRAIATLMSDEVFHDIAYKAKDRQDL
LAGIEEFLDEVIVLPPGEWDPDIRIEPPKSLPSSDKRKNQYNAGGGGDGPQMNGDTPGHD
GGQGGGGGHGHVGEELMNTGKFCGGLILDIKRKLPFFASDFYDAIHIQSLSAILFIYLGT
VTNAITFGGLLGDATENMQGVLESFLGTALTGAIFCLLGGQPLTILSSTGPVLVFERLLF
NFSKDHDFDYLEFRLWIGLWSAFFCLVLVATDASSLVKYFTRFTEEGFSSLISFIFIYDA
FKKMLKLAHYNPINADYDPNYVTMYDCRCMPPPDDGNMTGLYIDASAWINNADLSVNATW
ASLDKKQCVVYGGELIGPACGFVPDVTLMSFILFLGTYTCSMSLKKFKFSRFFPTTVRKL
ISDFAIILTIVIFCGVDAFVGVDTPKLIVPTEFKPTSPNRGWFVPPFGGNPWWVYLAAAL
PALLVTILVFMDQQITAVIVNRKEHKLKKGAGYHLDLFWVAILLIVCSFMGLPWYVAATV
ISIAHIDSLKMETQCSAPGEQPKFLGVREQRVTGVFVFVLTGLSVFMAPILKFIPMPVLY
GVFLYMGVASLNGVQFLDRLQLLLMPAKHQPDLIYLRHVPQRRIHLFTFIQALCLALLWV
LKSTVAAIIFPVMILALVAVRKAMDYIFSQQDLSYLDDVIPEKDKKKKEDEKRKKKQKKG
SIDSEIDFPPEYPYNDKIPSIKISMDIMETEPMLGNKDKASDRPPSSFRDQHSPC
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgataaaaacaaggtggaggatgaggcagtgctggacagaggggcatgcttt
gtcaagcatgtctgtgatgaggaggaggtggaaggtcaccacaccgtgtatattggtgtg
catgtgcccaagagctaccagcggagacggcgccaccgacgcaagtccagccacaaggag
aggaaggggaggccggcggacaacgtggagggggacaaatcagatggagagaatgctgac
gaggcagcgcccaacatcctcaaacccctcatctctgcagcagcagagaggataaggttt
atcctgggtgaggaggatgacggccccccgccccctcagctcttcactgaactggacgaa
ctgctggccgtcgatggacaggagatggagtggaaggagacagccaggtggataaagttt
gaggagaaggtggagaagggaggagagcgttggagtaagccccacgtggccacattgtcc
cttcacagtctgtttgagctgaagacctgcatcgagaaaggcaccatcctgctggacctg
gaagcctccactctaccacaggtggtcgagctgatcactgacagccagatcgagatcggt
cagctgaagcctgagctaaaggatcaggtcatgtacacgttgctacggaaacatcgtcac
cagaccaagaagtccaacctgcgctcgcttgctgacatcggcaagacggtgtccagtgca
agtaggctgttttccaaccaagaccagaacgcacgcggtctcaatgagcacccccagccc
tttccccacttgcacacccagtcccaaccccagtctgtgccttatgcaaccacgcttggc
catgaggaaccgataaaggagatccaaagaagctccagcatgcaatacatcagtagccca
gccacggcccatcggaacctgacctccaacagcctcaacgacttttctgaccaaccagat
agagaccagctgaagaataagttgatgaagaagcttccacgtgatgccgaggcatctaac
gtcctggtcggaggggtggacttcctggacacacccttcgtggcgtttgtccgcctgcag
caggctgccatgttgggaggtttgacagaggtccccgttcctaccaggttcctattcgtg
ctgctggggcccaaaagcaaagccaagtcctaccatgagatcggacgagctatcgccacc
ctcatgtctgatgaggtgttccatgacattgcctacaaggccaaggacagacaggacctg
ctggcaggcattgaggagttccttgatgaggttatcgtcctacctcctggggagtgggac
cctgacatcaggatagaaccccccaaatccctgccctcctcagataagaggaagaaccag
tataatgctggaggcggaggggatggcccccagatgaacggggacacgccaggacatgac
gggggtcaaggaggaggagggggacatggacatgttggagaagagctcatgaacactgga
aagttttgtggtggcctcatcctggacattaagcgaaagctgccgttcttcgccagtgat
ttctacgatgccatacacatccagtcgctctccgccatcctgtttatctacctgggcacc
gtgaccaacgccatcaccttcggagggttgctaggagatgctacagaaaacatgcagggt
gtgttggagagtttcctgggcacggcactgacgggggccatattctgtctgctgggtggc
cagcctctcaccattctcagcagcacaggtcctgtactggtgtttgaaaggctcctcttc
aacttcagcaaagaccatgactttgactacctggagttcaggctgtggatcggcctttgg
tcagccttcttctgcctggtgctggttgccacagatgccagctccctggtcaagtacttc
acacgcttcacagaggagggcttttcttccctcatctccttcatcttcatctacgacgcc
ttcaagaagatgctgaagctggcccactacaaccccatcaacgctgactatgaccctaac
tacgtcacaatgtacgactgccgctgcatgcccccaccggatgacggcaatatgacgggt
ctctatatcgatgcctctgcctggataaacaatgctgatctgtcggtaaatgccacatgg
gcgtctctcgacaagaagcagtgtgtggtgtacggcggcgagctgattggtccagcctgt
ggcttcgtccctgacgtcactctgatgtcattcatccttttcctggggacctacacctgc
tccatgtccctcaagaagtttaagttcagccgcttcttccccaccactgtgaggaagctg
atcagtgattttgccatcatcctgactattgttatcttctgtggagtggatgcctttgtc
ggagtggacacacccaagctcatcgtgccaactgaattcaagcccaccagccccaaccgt
ggctggttcgtgcccccatttggagggaacccgtggtgggtttatctggcagcagccctc
cctgctctcctggtcaccatcctggtgttcatggaccagcagatcaccgccgtcatcgtg
aacaggaaggagcacaaacttaagaaaggggcaggctaccatttggacctgttctgggta
gcaatactactcatcgtttgttccttcatgggcctgccctggtacgtggctgctactgtc
atctccatcgcccacattgactctctgaagatggagacccagtgctctgcccctggggag
caacctaagttcctgggtgtcagagagcagagagtgaccggtgtctttgtctttgttctg
actggactgtctgtcttcatggctcccatcctcaagttcatccctatgcccgtgctctat
ggcgtgttcctctacatgggcgtggcatctctcaacggtgtccagttcttggaccggctg
cagctgctcctgatgccagccaagcaccagcctgacctgatatacttgcgccacgttccc
cagcgtcgtatccacctgttcaccttcatacaggccctctgccttgcccttctctgggtc
ctcaagtccactgtcgctgcaatcatcttccctgtcatgatcttggccctggtggcagtc
agaaaggccatggactacatcttctcccagcaagatctcagctacctggatgatgtcatc
ccagagaaagacaagaagaagaaggaggatgagaagaggaagaagaaacagaagaaagga
agcatcgacagtgaaatcgattttccccctgagtacccctacaatgacaaaatccccagt
attaaaatctccatggatataatggagacggagcccatgttggggaataaggataaggcc
tcggacagacccccgtcgtctttccgtgaccaacactcaccatgttga
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