Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408502
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Entry
139408502 CDS
T10872
Name
(RefSeq) substance-P receptor-like
KO
K04222
tachykinin receptor 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04020
Calcium signaling pathway
ocla04080
Neuroactive ligand-receptor interaction
ocla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
139408502
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139408502
04082 Neuroactive ligand signaling
139408502
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ocla04030
]
139408502
G protein-coupled receptors [BR:
ocla04030
]
Rhodopsin family
Peptide
Tachykinin
139408502
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Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7tm_4
Motif
Other DBs
NCBI-GeneID:
139408502
NCBI-ProteinID:
XP_071008572
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Position
5:complement(20441377..20449189)
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AA seq
427 aa
AA seq
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MDSFLNTTDNYLSINATNGSGLNDTEGYNQFVQPIWQIALWAIAYCSMVCVSVIGNLVVI
WIILAHKRMRTVTNYFLVNLAFAEASMSAFNTVINFAYSIHNEWYFGLGYCRFHNFFPIA
AVFTSIYSMTAIALERYMAIIHPLRQRLSSAETRVVIGGIWVLALLLAFPQYYYSATDQL
PGRTVCYIQWPEYTNDTTMDFKKMYSVSVVLLYYFLPLCIMGCAYMVVGSSLWAGTIPGD
STHRYREQLIAKRKVVKMMIVVVCTFAVCWLPYHIYFLLQQFHPDPMQLFEWRYIQQVYL
AVLWLAMSSTMYNPIIYCCLNDRFRAGFQQVFCWCPCVPAASYEGLELKSTRYLQTQVSV
YRASRMETSMSTVLQPTEEERCGAEQPASPPIIQTTMELTSTSNGSASRSAINPPDSPAY
YGRHNMD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggactcgtttttgaacaccacggataactacctttccattaacgccactaacggctcc
ggtttgaacgacacagagggatataaccagttcgtgcagccgatctggcagatcgctctc
tgggccatcgcctactgcagcatggtgtgcgtctcggtgatcggtaacctggtggtcatc
tggatcatcctcgcgcacaaacgcatgaggaccgtgaccaactacttcctggtgaaccta
gcctttgcagaggcatctatgtctgccttcaacacagtgataaactttgcatacagcatc
cataacgagtggtactttggtttgggctactgtcggttccataacttcttccccattgca
gcagtcttcaccagcatatactccatgaccgccatagcactggaaaggtacatggctatc
atccaccccctgaggcagaggttgtcttcagcagagacccgtgtagtgatcggagggatc
tgggtgttagctctactattggccttcccccagtactactactcagctactgaccagctg
cctggtaggactgtttgttacatccaatggcctgaatacaccaatgacacaaccatggac
ttcaaaaagatgtactctgtgtctgtggtgttgctgtactacttcttgccgctgtgcatt
atgggatgtgcctacatggtggtgggctcgtccctgtgggcggggactatccctggagac
tccacccaccgctaccgagagcagctaatcgccaaacgcaaggtcgtgaagatgatgatc
gtggtggtgtgtacgtttgcagtgtgctggctgccttaccacatctacttcctgctccag
cagttccaccctgaccccatgcagctgtttgagtggcgctacatccagcaggtctacctg
gctgtcctgtggttggccatgagctccaccatgtacaaccctatcatctactgctgtctc
aatgacagattcagggcaggctttcagcaggtgttctgttggtgtccgtgtgttcctgcc
gcctcctacgagggactggaactcaagtccacccgctacctacagacccaggtgagtgtg
taccgggccagccggatggagaccagtatgtcaacagttctgcagcccactgaggaggag
cgctgtggggcagagcagccagccagcccccctatcatccagacaaccatggagctcacc
tccacctccaacggctcagcctcacgatcagccatcaacccccccgacagccctgcttac
tacggcagacataacatggactag
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