KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408517
Entry
139408517         CDS       T10872                                 
Name
(RefSeq) ras-related protein rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04137  Mitophagy - animal
ocla04140  Autophagy - animal
ocla04144  Endocytosis
ocla04145  Phagosome
ocla04148  Efferocytosis
ocla05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    139408517
   04145 Phagosome
    139408517
   04140 Autophagy - animal
    139408517
   04137 Mitophagy - animal
    139408517
   04148 Efferocytosis
    139408517
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    139408517
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ocla04131]
    139408517
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ocla04147]
    139408517
   04031 GTP-binding proteins [BR:ocla04031]
    139408517
Membrane trafficking [BR:ocla04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    139408517
Exosome [BR:ocla04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   139408517
  Exosomal proteins of other body fluids (saliva and urine)
   139408517
  Exosomal proteins of colorectal cancer cells
   139408517
  Exosomal proteins of bladder cancer cells
   139408517
GTP-binding proteins [BR:ocla04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    139408517
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU RsgA_GTPase Gtr1_RagA cobW ATP_bind_1 nSTAND3 PduV-EutP AAA_16 Septin AAA_24 AAA_22 NTPase_1 DUF5992 AAA_7 AAA_5 ATPase_2 SRPRB NACHT ABC_tran
Other DBs
NCBI-GeneID: 139408517
NCBI-ProteinID: XP_071008601
LinkDB
Position
5:21280053..21284501
AA seq 205 aa
MASRKKVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTIQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPDNFPF
VVLGNKIDLENRQVTTKRAQAWCASKNNIPYFETSAKEAINVDQAFQTIARNALKQESEV
ETYDFPDQIKLRDDRSSSSSDGCSC
NT seq 618 nt   +upstreamnt  +downstreamnt
atggcctcccgtaagaaggtgctgctgaaggtgatcatcctcggagactctggggtaggg
aagacatctctgatgaaccagtatgtaaataagaggttcagtaaccaatacaaggccact
ataggagctgacttcctcaccaaggaggtgatggtggatgacaggctggtcaccatacag
atctgggacacggcggggcaggagcggtttcaatctctgggtgtggcgttctaccgtgga
gctgactgctgtgtgctggtctatgatgtcacggcgcccaacacctttaagactctggac
agttggagggatgagttcctgatccaggccagccccagagacccagataacttccccttt
gtggtgctaggcaacaagattgacctcgagaacagacaggtgacaacaaagcgtgcccag
gcctggtgtgccagtaagaacaacatcccctactttgagaccagtgccaaggaggccatc
aacgtagaccaagcattccagaccatcgcccgcaacgccctcaaacaggagtctgaggtg
gagacgtatgactttccagaccagatcaaactgagagacgaccggtcctcctcctccagc
gacggctgctcctgctga

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