Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408543
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Entry
139408543 CDS
T10872
Name
(RefSeq) junction-mediating and -regulatory protein
KO
K24045
junction-mediating and -regulatory protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139408543
Membrane trafficking [BR:
ocla04131
]
Autophagy
Other autophagy associated proteins
Others
139408543
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JMY
WHAMM-JMY_N
WH2
PEPCK_PPi_lobe_2
Motif
Other DBs
NCBI-GeneID:
139408543
NCBI-ProteinID:
XP_071008654
LinkDB
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Position
5:complement(22039720..22096433)
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AA seq
919 aa
AA seq
DB search
MSFMMEDSVESDWVAVRPNVFDEKERHKFIFIVAWNEIEGKFAITCHNRTVQKRTAFRDS
LLETVECDLVSPPVTVKLAPEADKHKTPIKSPTKKKDDISTLVKVRCNVSPKEIKTTKSP
IRERTAAVGSSSRPAESVIKTLGSWDIVSCKATDIEVLEPADVPSLPRSPDDGDGEESDS
SREGYSWAGLFSFQDVRAAHVQLCAVNSDLEPCLPPFPEEPVGMWTVLFGAPEVSQRETD
ALCYQLQVYLGHALDTCGWKILAQVLFTESDDSEEYYESLSELRQKGYEDALQRAKKRLQ
ELLERHRAMESMVELLQVYPEEDEAYGELLEATTQLYHYLLQPFRDMRELAMLRRQQIKI
SLETERLGPRRVEWLRREDEEWTRKAHAAVLSIQDLTVKFFETTARAQKAVYERMRVDQR
KFGKSTWAAAVDRMERLQYAVSKETLQLMRAKEICLEQRKHGLKEEMQSLQEGEDAMQRL
DQMEALYYELQLQLYDIQAEVLRCEELLLNAQLTSLRRQITERQDEVVYYDAYESPDAMR
RVEDPSASLPPLRDKLSQLQQRTRQLEARRGRITAKKAYLKTKKEICIINHNQKIQQRQG
MKDDQTHQALQQRGEEQEEEEERSNARMSLDRSRTLDRLRSFKQRFPGQVTLKSSRLRMS
HSHSRRKTSTPLSPAGRPETLAVSVQTDTVDLPELFAPPSDACGHQSVSLPPLGGTTGPL
SAPSLPPLSAIPSSAPPPPPPPPPPPPPSLDDLSSEGVEWAHPTSPVRQSKAGSDSEPLP
LAPFSPRFFDSSQLQTARKKLKKTAMLDSSQWRRASSPMDEVLNSLKRGSFHLRKAELRV
LAPDPDDDESNNILAQIRQGVRLKKVRTRPEQQRHTKGLFPHSADALTRSIHEALRRIKE
ASPESESEDEGLPCTDWEN
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcatgatggaggattctgtagagtcggactgggtggccgttcgaccaaatgtt
ttcgacgaaaaggaaagacacaaattcattttcatcgtcgcttggaacgagatcgaggga
aagttcgccataacctgccacaatagaacagtacagaaacggacagcgtttcgggattcg
ctattggaaactgtcgaatgcgacctcgtatccccccccgtcaccgtcaaactagccccc
gaggcagacaaacacaaaactccaataaaaagtcctaccaaaaagaaagatgacatctcc
acattggttaaagttagatgtaacgtcagcccgaaagaaataaaaacgacaaagagcccc
attcgagagagaactgcggcggtgggttcctcgtcaaggccagccgagagtgttatcaaa
acactggggtcgtgggacatcgtgtcctgcaaggcgaccgacattgaggtcctggaacca
gcggatgtccctagtttgcctcgctccccggatgatggcgacggagaggagtcggacagc
agccgagagggctacagctgggccgggctattctccttccaggacgtccgggcagcccac
gttcaactctgcgcggtcaactcggacctggagccctgtctgccccccttccctgaggag
ccggtgggcatgtggacggtgcttttcggggccccggaggtgtcccaacgggaaacggat
gccctgtgttaccaactccaggtgtacctgggccatgctctagacacctgtggctggaag
atccttgcccaggttctttttacggagagtgatgactcagaagagtactatgagagtttg
agtgagctgagacagaagggttatgaggatgctctccagagggccaagaaacgtctccaa
gagctgctggagaggcaccgggccatggagagtatggtggagctgctgcaggtgtatcca
gaggaggatgaggcctatggagagttactggaggctacaacacaactctaccactacctg
ctacagcccttcagagacatgagagagctggccatgctgcgcagacagcagatcaagatc
tccttggagacagagcgtctggggcctcgtcgtgtggagtggctgaggagggaggatgag
gagtggacgaggaaggctcacgctgccgtcctctccatacaggaccttaccgttaagttc
tttgagaccaccgccagggctcagaaagcggtgtatgagcggatgcgtgtggaccagagg
aagtttggcaagtcgacttgggctgcagctgtggaccgcatggagcgtctgcagtacgcc
gtctccaaggaaacgctgcagttgatgagggccaaggagatctgcctggagcagagaaaa
cacggcctgaaagaggagatgcagagcctgcaggagggagaggatgccatgcagcggttg
gaccagatggaggcgctgtactatgagctccagctgcagctctatgacatccaggctgag
gtgctgcgctgtgaggaactgctgctcaacgcccagcttaccagcctccgcagacagatc
actgagcggcaggacgaggtagtgtactatgatgcgtatgagagtcctgatgccatgcgg
agggtagaggacccctctgcctctcttccccccctcagagacaagctcagccagctgcag
cagaggaccagacagctagaggcacgcaggggacgcatcaccgccaagaaggcctacctt
aaaaccaaaaaggagatctgtatcatcaaccacaaccagaagatacagcaacgccaaggt
atgaaggatgaccagacccatcaagcactgcaacagcgaggggaggagcaggaggaagag
gaggagaggagtaacgccagaatgagtctggataggtcgagaactctggacagactacgc
agcttcaaacagcgtttccctggtcaggtgactctgaagtccagcagactgcgtatgtcc
cacagccactcccggaggaaaacctccactcccctctcccccgcggggaggcctgagacc
ctggctgtcagtgtccaaacagacactgttgacctccctgagctctttgctcctccctct
gatgcctgtggtcatcagagtgtctctctacccccgctagggggcaccactgggcctctc
tctgccccctctcttcctcccctctcagcgattccctcctctgcccctccacctcctccc
cctcctcctcccccaccccccccctccttagatgacctctccagtgagggagttgagtgg
gctcatcccactagcccagtccggcaatccaaggctgggtcagattcagagcctctcccc
ctggctcccttctccccacgtttctttgacagcagtcagctgcagacagccagaaagaaa
ctgaagaagacagccatgctggactcttcacaatggaggagagcgagttctcccatggac
gaggtcctgaactccctgaagagaggcagcttccacctgcgtaaggctgagctgagagtc
ctagcccccgacccagacgatgacgagagcaacaacatcctggcccagatccggcagggt
gtccggttgaagaaggtgcggacgcggccagaacagcagcgacacaccaagggcttgttc
ccccactctgccgacgctctgacccgctccatccatgaagccctgagacgcatcaaggag
gcttcgcctgagtctgagtctgaggacgaaggcctgccctgcaccgactgggagaactag
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