Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408549
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Entry
139408549 CDS
T10872
Name
(RefSeq) vesicle-associated membrane protein 5-like
KO
K08514
vesicle-associated membrane protein 5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
139408549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139408549
Membrane trafficking [BR:
ocla04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
139408549
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Synaptobrevin
Amnionless
PrgH
Oxidored_q3
Neur_chan_memb
EMC3_TMCO1
CENP-H
Motif
Other DBs
NCBI-GeneID:
139408549
NCBI-ProteinID:
XP_071008667
LinkDB
All DBs
Position
5:23103415..23108669
Genome browser
AA seq
125 aa
AA seq
DB search
MPDKNSRLRQAQEEAEEVKVIMMDNMEKTEERKAKLQDLDKRAEELKLKSKSFHKTSMKV
KEQKKCDNIKAKWKLIAVVAASAIIVILVATFMLVNRSSPENTHDIGSILMNEGGITPTT
IGPGK
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacaagaacagtcggctgcgtcaggctcaggaagaggcggaggaggtgaaggtc
atcatgatggacaacatggagaagaccgaggaacgcaaggcgaaactgcaggaccttgac
aaaagggctgaggaactgaagttaaaaagcaagtccttccacaagacctcaatgaaggtg
aaggagcagaagaaatgtgacaacatcaaggccaaatggaagctcattgctgttgttgca
gcctctgccataattgtcattctagtagctaccttcatgttggtcaacagatcaagccct
gaaaacacacatgatataggcagtatcctaatgaacgaaggaggcattacaccaacaacc
attgggcctgggaagtag
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integrated database retrieval system
