Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408556
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Entry
139408556 CDS
T10872
Name
(RefSeq) erbin-like isoform X1
KO
K12796
erbb2-interacting protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
139408556
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
PDZ
LRR_LRWD1
LRR_5
PDZ_6
PDZ_2
LRR_NXF1-5
LRR_At5g56370
LRR_9
Motif
Other DBs
NCBI-GeneID:
139408556
NCBI-ProteinID:
XP_071008692
LinkDB
All DBs
Position
5:complement(23768358..23886822)
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AA seq
1429 aa
AA seq
DB search
MSSKRNLFVRLVPCRCLRGEEETVTSLDYSHCSLEAVPKEIFSFEKTLEELYLDANQIEE
LPKQLFNCQMLHRLSMPDNDLTVLPAAIANLINLKELDVSKNSIQEFPENIKNCKVLAIV
EASVNPISKLPEGFTQLLSLTQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSM
HKLTQLERLDLGSNEFTEVPEVLEQLTGIKELWMDGNRLTFLPGMLGTLKQLSYLDVSKN
NLEMVDEQICGCESLQDLLLSNNALTQLPGSIGSLKKLTALKVDENQLMYLPDSVGGLAA
LDELDCSFNEIEALPSSIGQCVSIRTFAADHNFLTQLPPEMGSWKSATVLFLHSNKLESL
PEEMGDMTKLKVINLSDNKLRNLPYSFTKLNQMTAMWLSENQSKPLIPLQKEEDPETHKT
VLTNYMFPQQTRTEDCIPNSDSESFNPSLWEEQRKQRAQVAFECDEDKDERETPPREGNL
KRYPTPYPDELKNMVKTAQSIAHRLKEDESGDESGKDAKPNERIHVGVQDVGVKVIEAPR
ANGKPVEMEPKAPVCVQDSTVPLETSESYTSQKTSLRTSDNTKTMNHEDTLESFSLQDSE
ELSSEEEMKMAEMRPPLIEISINQPKVVALSKDKKDDGKDADSLLDETVANSNQNNSNCS
SPSRMSDSVSLTTDSSQDNSLCTPEREAKMPFLPKSRQEDENMNQQKVSTPLLQNGNGPD
TTLQALLKNQQSYESKPEKIVGDYDLSMEERLAFIKKGINNGMGDGYTKWDQINMNVAKL
PLQPDNVGVQLDDCQNGTSTKEAFHHLPPPYNNENSTAPITDHLENGNQMGDHFNGRSSE
GLAVSPMRLDSATSVVRTASAGVTASSDMSLSHSTEELSPVAKAQSITNIETGEMKLYSL
DTEGGSYEGGVVGRMAGAVPGAQGQSIVRSKSASLLNDQPFQVYPGSSASSSDLLSSSSK
PPVSTGRYPVPSGMAMGPPPQYNVQYTSSALPKEGLWTHRTPVPPDQGYLPPPQHSLANT
NYSNRNQAPPYPHQAQQRGPPMGPKQPGDMWAKERHLPPPGSQPRSSTLQRQSSSSSTAS
MGDPRRMQVPEGDYMTYRDIHTLGRGPLAIAQTMQRPLSARTYSIDGPCAPRPHTARPQP
HELPERTMSVSDFNYQHVSPSKRPNARVKSEHSLLDGPGGPGAGARVPVDWRDQVMRHIE
AKKMEKYALSLSYNSNYAPLSCSHYGSSRDVHHTGSQGSLVFSAAADGRPYGAQGICDDV
LGPQGQQGYTMDTLRKVPLMNGQMGGPVRGQMTSCQAPMARHPSREQLIDYLMLKVSHGQ
QHQGPPPPRATQDTLHQEMRVKVEKNPELGFSISGGVGGRGNPFRPDDNGIFVTRVQPEG
PVSKILQPGDKILQVNGYSFVNIDHGNAVALLKTFPTTVDMIIIREVTA
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcaagcggaacctgtttgtgcggctggtgccatgccgctgcctgcggggggag
gaagagacggtgacgtcactagactactcccactgcagcctggaggcagtgcctaaggag
atcttcagcttcgagaagaccctggaggagctctatctggacgccaaccagattgaggag
ctgcccaaacaactgttcaactgccagatgctccaccggctgagcatgccagacaacgac
ctcacggtgctgcccgcggccatcgccaacctcatcaatctcaaggagctagacgtcagc
aagaacagtatccaggagtttccagaaaatatcaagaactgcaaagtcctggctattgtt
gaagcaagtgtgaatcccatctccaagctcccagagggtttcacccagctcctcagcctg
acacagctctacctgaatgacgccttcctcgagttcctaccagccagctttggcaggttg
actaaactgcagatcctggagctgagagagaaccagttaaagatgttgccaaaaagcatg
cacaagctcacccagctggagagattggacttggggagtaacgagttcactgaagtgcct
gaggtattggagcagctcactggaatcaaagagttgtggatggatggaaacagactgaca
ttcctaccagggatgctaggcactctgaagcagctgtcctaccttgacgtctccaagaac
aacctggagatggtggacgagcagatttgtggctgtgagagcctgcaggacctactgctt
tctaacaatgcactcacacagctgcccggatccataggctccctgaagaaactaaccgcc
ctaaaagtggacgagaaccagctcatgtatctgccagactctgtcggaggtctggcagcc
ctggatgagcttgactgtagttttaacgagatcgaggctctgccctcctccattggacag
tgtgtcagcatacgcacttttgccgctgaccacaacttcctcacacagctgcccccagag
atgggcagctggaagagtgccactgtgctgttcctgcactccaacaagctggagtctcta
cctgaggagatgggagacatgaccaagctcaaggtcatcaatctcagcgacaacaaattg
aggaaccttccctacagcttcaccaagcttaaccagatgactgctatgtggctgtctgag
aaccagtcgaagcctctcatccctctgcagaaggaggaggatccagagacccacaagacg
gttctcaccaactacatgttcccccagcagaccaggacagaggactgcatccctaactct
gacagtgagagcttcaacccctctttgtgggaggagcagaggaagcagcgggcccaggtg
gccttcgagtgtgacgaggacaaggatgagagggagacgcctccgcgggagggcaacctg
aagcgctacccgacaccgtacccagacgagctgaagaacatggtgaagacggcccagtct
atcgctcacaggctgaaggaggacgagtcgggcgacgagtcggggaaggatgccaaacct
aatgagcggatccatgtgggagtgcaggacgtgggagtcaaggtgattgaggctccccgc
gccaatggcaagccagtagagatggagcccaaagcacctgtctgtgtccaggactccaca
gtacccctggagacctctgaatcctacacctcccagaagacctcactccggacctcggac
aataccaagaccatgaaccacgaggacaccctggagtctttttctctgcaggattctgag
gagctttcatctgaggaggagatgaagatggcggagatgagacctcctctcattgagatc
tccatcaaccagcccaaagtggtggcacttagtaaagacaaaaaagatgacggtaaagac
gctgactcgttgttggacgagacagtggccaacagcaatcagaacaacagcaactgttcg
tccccgtcacgcatgtcggactcggtgtctctgaccacggacagcagtcaggacaactcc
ctgtgcacccccgagagagaggccaagatgcccttcctacccaagagcaggcaagaggat
gagaacatgaatcagcagaaggtaagcacccctctcctccagaacggcaacggcccagac
actaccctgcaggccctcctgaagaaccagcagtcctacgagtccaagccagagaagatt
gtgggggactacgacctgtccatggaggagaggctggccttcatcaagaagggcatcaac
aacggcatgggcgacggctacaccaagtgggaccagatcaacatgaacgtggctaagctg
ccgctgcagccggacaacgtgggggtccaactggatgactgtcagaatggcacgagcacc
aaggaggcctttcaccacttgcctccgccgtataacaacgaaaactctacggcgcccatt
acagaccacttggagaacggcaaccagatgggcgaccactttaacggccgctccagcgag
ggattggccgtgtcgcccatgaggttagactctgccacgtcggtggtgcggactgcttcg
gcgggcgtgacggccagcagtgacatgtcgctgtctcacagcacagaggagctgtccccg
gtggccaaggctcagagcatcaccaacattgagacaggggagatgaagctgtactccttg
gacactgaggggggctcctacgagggtggagtagtgggcaggatggccggagccgtaccg
ggggcacagggtcaaagcattgtccgcagcaagtcagcctccctgctcaacgaccagccc
ttccaggtctaccccggctcctcagcctcttcctccgacctgctctccagctcctcaaag
cctcctgtcagcaccggccgctaccccgtcccctcaggcatggccatgggcccgccgcct
cagtacaacgtccagtacaccagcagcgccttgcccaaagaaggcctgtggacccatagg
acccccgtcccccccgaccagggctacctccctccaccccagcactctctggccaacacc
aactactccaaccgcaaccaggcccctccatatccccaccaggcccagcagagaggcccg
cccatggggcccaagcagcccggtgacatgtgggctaaggagagacacctgccccccccc
ggtagtcagccacggagcagcaccctgcagaggcagagcagcagttcctccacggcctct
atgggggacccccggcgcatgcaggttcccgagggagattacatgacgtacagggacatc
cacaccctgggccgggggccgctggccatagcccagaccatgcagaggcctctgtcggcc
cgcacctacagcatcgacgggccctgtgcccccaggcctcacaccgccaggccacagccc
catgagctgcccgagaggaccatgtcggtcagcgacttcaactaccagcacgtcagcccc
agtaaaaggccaaacgccagggtgaagtctgagcactcgctgttggacgggccaggagga
ccgggagcaggagcaagggtaccagtggattggagagaccaggtgatgcgccacatcgag
gccaagaaaatggaaaagtacgccctgtctctgtcctataattccaattatgccccgctg
agctgctctcactacggtagctctagggacgtgcaccacacaggcagccaaggctctctg
gtctttagtgctgccgcagacggacggccctacggagcccagggcatctgtgatgatgtg
ttaggtcctcaaggacaacagggctacaccatggacaccctccgaaaagtgcctttaatg
aatggtcagatgggcggtccagtgcgaggccagatgacgtcgtgccaggcgcccatggcc
cgccacccctccagagagcagctcatcgactacctgatgcttaaggtctcccatggccag
cagcaccagggaccccctccgccacgggccactcaagacacactgcaccaggagatgcgt
gtgaaagtggagaagaaccctgagctagggttcagtatatcaggaggagtgggaggacgg
ggaaacccctttcgtccggacgataatggcatctttgtgacgagggtccagcctgaggga
cctgtctcaaagatcctccagcctggagacaagatcctccaggtgaacggatacagcttt
gtgaacattgaccacgggaacgccgtagccctgctgaagacgtttcccaccactgtggat
atgatcatcatccgagaggtgacagcgtag
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integrated database retrieval system
