Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408608
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Entry
139408608 CDS
T10872
Name
(RefSeq) amyloid-beta A4 precursor protein-binding family A member 1-like
KO
K04531
amyloid beta A4 precursor protein-binding family A member 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139408608
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
139408608
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
139408608
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PID
PDZ
PDZ_6
AbeC
Motif
Other DBs
NCBI-GeneID:
139408608
NCBI-ProteinID:
XP_071008792
LinkDB
All DBs
Position
5:complement(28161440..28171836)
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AA seq
1115 aa
AA seq
DB search
MIHKQQGERLGDAVGEEQKFPAAPRNRHPNGTAGGGGGEGVPVRRSWRPCQMLGQDGQDP
YLHHHHHHHPSIPHQGSDRGPPRHHRRSPSGQGLSRQGEGVAMEPPRHTQPPRPGVARYR
RQGEPRVRVHRRRQPPRDIQEIHDPPFPHHWSSDASLTEQSDMTGPATMKQQHLMHSPQP
HHTQDSGAPDLTAGTLTPTHHTPCPPAPDIPPQELLPPLTNRDSPQPQEDEEKEEEGCSS
SITQSVSAQSGFDIQTDLEWNQEQGGHGEGDLKETSLGEEDQRERDLGEDNQEDGTNGHC
SDTDSAASLSMEAPSLSPPPRQSPPTSPSPFSPPPLQSELSDQCSDEFSPSPTHDTDIMP
DDESCTDSPLSHSESFTFTDSYPKTYAEFYYESYPQSESITESYTEPYAKSYPQSFPEPL
TLINYPDLDRELHMRSEADPDEPYAEPYPEPYSCRQREHVYKGATDTEPPTNPQPHASWP
GREVGLPQTSPPWQGRSVGARLHHYDDTTSDGEGDSLKESSSSQSLGPPPRYVQGETQAE
YPSSGQPSSGELQDEQARMELRLPAEGLSEDSVRGLGNAISLAIRDIREAIEEVKTKTVR
SPYTPDQPIEPVWVMRQKVSPTEEEYSPQQPPGGNVSPVSQSPSHYTQVPARDTVPSPAQ
VLAQVPEPICPVRAESSRTHQVQHREHREQKEPPRPPSIEEIRRSMPFFPSYVEVPGPCD
PEDLIDGIIFAASYLGSTHLLSERTPTKSARMQQAQEAMSRVRTAQKQAKHRKKTEDEVP
SSTEVDLFMSTQRIKVLNADTQQESMMDLPLRTISYIADIGNMVVLMARGKMVRSRSAQE
NLNQTTDHSDHTNSPARDDLPQYRMVCHVFESEDAQLIAQSIGQAFSVAYQEFLRANGID
PEDLSQREYSDLLNTQDMYNDDLIHFSKSENCRDVNIEKQKGEMLGVVIVESGWGSILPT
VIIASMMHSGPAEKSGRLNIGDQIMTINGTSLVGLPLSTCQSIIKGLKAQCRIKLNIVRC
PPVTMVLIRRPDLRYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINSQSVVATPHE
KIVDILSNAVGEIHMKTMPAAMYRLLTAQEQPVYI
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaagcagcagggggagcggctaggtgatgctgtgggggaggagcagaagttt
ccagctgctcccagaaacaggcatcccaatggcacagcaggaggaggcgggggagagggt
gtccctgtccggagaagttggagaccctgccaaatgctcggtcaggacgggcaggatcct
tatcttcatcaccaccaccatcatcatccctctattccgcaccaaggctcggaccgcggc
cccccacggcaccataggcgttcaccctcagggcagggcctgtccaggcagggggaggga
gtggctatggagcctcctcgccacacccagccgccccgccctggcgtggcccgctaccgc
cgccagggggagcccagggtcagagttcacagacggagacagccgccgagagacatccaa
gagatccacgacccgccgtttccacatcattggtcatctgacgcttctctgactgagcag
agtgacatgactggtccagcaacaatgaagcagcagcacctcatgcactcccctcaaccc
caccacacacaggacagtggagcacctgaccttactgctggtactcttacgccaacacac
cacacaccatgtccccctgcacctgatataccccctcaagagctgctaccaccccttacc
aacagagattctccccagcctcaggaggatgaggagaaggaggaggaagggtgcagctca
tccataactcagtctgttagtgctcagagtggatttgacatccagacagacctagagtgg
aaccaggagcaggggggccatggagaaggggacctaaaagagacgagtcttggagaagag
gaccaaagagagagggatttgggagaggacaaccaggaagatggaacaaatggccactgt
tctgacactgatagtgctgcctctctaagcatggaggctccgtccctgagcccacctcct
cgccaatcaccacctacctctccatctccattctcgccccctccacttcagtctgagctc
tcggaccaatgtagtgatgagtttagcccaagccccactcacgacactgacataatgcct
gacgatgagagctgcactgattctccactgtcccattccgaatctttcacctttacagac
tcgtatccaaagacctatgcagaattttattatgagtcctacccacagtcagaatccatc
acagaatcctacacagagccctacgcaaaatcttacccccagtctttccccgaacccttg
acattaattaattatccagacttagatagagagctccacatgagatctgaggccgaccct
gatgagccatatgcagaaccctacccagagccctatagttgtagacagagggagcatgtt
tataagggagctacagacactgagccacccactaatccacaaccacatgcctcctggcca
ggtagggaggtggggttaccacagaccagccccccttggcagggtcgctcagttggcgca
agactgcaccactacgatgacactacgtctgatggggagggtgacagccttaaagaaagc
tccagctctcaaagcctggggccacctcccaggtacgtgcagggtgaaacccaggcagag
tatcccagctctgggcagcctagttcaggtgagttacaggatgagcaggccaggatggag
ctcaggcttccagcggaaggcctttcagaggacagtgtcagaggattagggaatgccatt
tctctggccatcagggacatccgagaggccatagaggaggtgaagactaagacggtgaga
tcgccctacactcctgaccagcccatagagcctgtgtgggtgatgagacagaaagtcagt
cctactgaagaggagtattccccacagcagccaccgggaggcaacgtgagtcctgtctct
cagtcaccttcacactatacccaagttccagctcgcgacacagtcccatccccagcccaa
gttctggcgcaagtcccagagcccatctgtcctgtgagggcagagtcctccagaacacac
caggtacagcacagggagcatagggagcagaaggaaccgcctcggcctccatcgattgag
gagatccggagaagtatgcccttctttccctcatatgtggaagtcccagggccatgtgac
ccagaggacctgatcgatggcatcatctttgcagccagctacctgggctccacccacctg
ctgtcagagaggacacccactaagagtgcccgcatgcagcaggcccaggaggctatgagc
cgtgtcaggaccgcccaaaagcaagctaaacacagaaagaagactgaggatgaggttcct
tcctccactgaagtggatctcttcatgtctacacagaggatcaaagtgctgaacgcagac
actcagcaggagtccatgatggacctgcccctgaggaccatctcctacattgctgacata
ggcaacatggtggtgctgatggccagggggaagatggtgcgctccaggagcgctcaggaa
aacttgaaccaaaccactgaccactctgaccacaccaacagccctgcccgtgacgacctt
ccccagtacaggatggtctgccacgtgtttgagtcagaggatgcccagctcatagcccag
tccattggccaggcattcagtgtggcatatcaggagttcctgcgggccaatggaatcgac
ccagaggacttgagtcagagggagtacagcgacctgctcaacactcaggacatgtacaac
gatgacctcatccacttctccaagtcagagaactgcagagacgttaacatcgagaagcag
aagggagagatgctgggggtggtcatagtggaatcaggctggggctctatcctgcccacc
gtcatcattgctagcatgatgcattctgggccagcagagaagtctggtcgactcaacatt
ggtgaccagattatgaccatcaatggaacaagtctggttggactgcccctctccacctgc
cagagtatcattaagggtctgaaggcccagtgcaggatcaagttgaacatcgtcaggtgt
ccccccgtcaccatggtgctgatccgcagaccagacctcagataccagctgggcttcagc
gtacagaatgggattatctgcagcctgatgagggggggcattgctgagagagggggggtc
cgcgtcggtcatcgcatcattgagatcaacagccagagtgtggtggccacgcctcatgag
aagattgttgacatcctgtctaatgcagtgggagagatccacatgaagactatgcctgca
gccatgtaccgtctgctgactgcccaggaacagccagtctacatctga
DBGET
integrated database retrieval system
