Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408622
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Entry
139408622 CDS
T10872
Name
(RefSeq) PH and SEC7 domain-containing protein 4-like isoform X1
KO
K12494
PH and SEC7 domain-containing protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139408622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139408622
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
139408622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
139408622
NCBI-ProteinID:
XP_071008816
LinkDB
All DBs
Position
5:28590007..28604055
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AA seq
1088 aa
AA seq
DB search
MEEAMVCSPLPDLKQPNSQICTSLELLPPSRPLEEAIRWGEMEKQVNEADREKEDNSPQT
GRISEEPEEHWDSMTLPVYPITCPSVLLSFATVQWDMPDLSPDTPFPMTDNSLADELDSS
GAASLDWTVNPLSLHHHHQQQQHQSCVTVINIELSVQEKTEKHNRPEQQLPLDSENSHPL
LLQFQACDTPSPDVEASAQQLFEEHDSLSESSPRQETEKEMGQPVTEDTIPPSDRAPSPV
QTGESETGQDSESLDSVLGEEQEQTSRVLTITINSEQGSSSANYEEKEQAVTNLVYNGDC
DEQTEQTEQSEGREQSDREGESETIELVEHLFEPAELKEQSELTEKSEHTWQSEPNHTKQ
SEYKDNTETTEQPEESEQLVESDQVEHSNQSGEEEQQTKETRLQQAEQSDKIDQSESEQT
ECLESKQLQQTQNSQQTVHSEQTEFSVQTEPQTEPSREMEHSEDSEQSKQSGETEQTEQS
RDSDQSKQSGETEQSEQTEQSDQTDNKPVHSKQLDLCFHCTEELEQSDHTEEQKQSEIEQ
PAQTELTELTEEDAQTEHSKQVEELEPKEYKEDSCLPPREGSLEQLESQVQQTEASEPVV
VHMNGGVLDREKACRMAERLYRLDGIHKTDVVKHLDKDNGFSQAVGQEYLKFFDFTGQSL
DQGLRSFLRVVVLIGETQERERVLQHFSCRFQQCNPHTFSSSGEVLTLTCAVMLLNSDLH
GQNVGKAMSVSSFVSNLDGMNEGENFSKELLKALYNTIKNEPLEWAVDEKELKSSMLLVE
DAKEDAPLRSKSNPFQDVPHDKKATVFKQGFLKRKAHADIDGKRTPWGKRSWKTFYGVLK
GMVLYLQKDEYNMEWQSTEEVVSVHHALAEQAADYTKRPHVFRLQTADWRVFLFQASSTA
EMSSWISRINLVSALHSSPPFPAAVGSQRRFCRPILPASQSAHTLERQLQSHARMLLSFQ
EDLAYLQQSLPESRKAKAKELEEHRVREEYLQHEKCRYEAYIQMLEVWKGLNQSVDTEVG
TSELSLFDRAVCKDTVDEKGEEGTLKKSHSSPSLDVEMALPHVVKVKRNISERRTYRKIV
IPRRNRDI
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggctatggtgtgctctcctctcccagacctcaagcagccaaacagccagata
tgcacctccttggagctcctaccaccgagcaggcccctggaggaggctattcggtgggga
gagatggagaagcaggtgaatgaggccgacagggagaaagaggacaactctcctcaaact
ggaaggatctctgaggagccagaggagcattgggactccatgactttacccgtgtacccc
attacctgtcccagtgtccttctgtcctttgccacagtgcagtgggacatgcctgacctt
tcccctgacacacccttccccatgactgacaatagcttggccgatgagctggattccagt
ggagcagccagtctggactggactgtgaacccgctgtcccttcaccaccaccaccaacag
cagcagcatcaatcctgtgtgacagtgataaacatagagctgtctgtccaggagaagaca
gagaagcacaatagaccggaacagcagttgcctctggacagtgaaaactcccatccgctg
ctgttgcaattccaggcatgtgacacaccgagcccagatgtggaggcttcagcacaacag
ctatttgaggaacatgactctctttcagaaagctctccgcggcaggagacagagaaagag
atgggacagcctgtgacagaagatactatcccaccctctgacagagctcctagccctgta
cagacaggagagtcagagacggggcaggatagtgagagtctagactctgtactgggagag
gaacaggaacagactagcagagtgctaacaataacgatcaattcagagcaaggatcaagt
tctgcgaactatgaggagaaggaacaggctgtaacgaatttagtttataatggagattgt
gacgagcagacagaacagaccgagcagtcagaggggagggaacagtcagatagggagggg
gaatccgagactatagaacttgtagagcacctgtttgagccagctgaactgaaagaacag
tcagaactcacagagaagtctgaacacacttggcagtcagagcctaaccacacaaaacag
agtgaatacaaagacaacaccgagacaacagagcagccagaagagtctgagcaacttgta
gagtccgaccaggtagagcattcaaatcagtcaggggaggaagaacagcaaactaaagag
acccgtttacaacaggcagaacaatcagacaagatagaccagtcagagtcagagcagaca
gaatgtttagaatcaaaacaattgcaacagacacaaaattctcaacaaacagtgcactca
gagcagacagaattttcagtgcagacggaaccacagacagaaccatcacgggagatggaa
cactcagaagattctgagcagtcaaaacaatcaggggagacagaacagacggaacagtca
agggattctgaccagtcaaaacaatcaggggagacggaacagtcagagcagacggaacag
tcagatcagacagataacaaaccagtacattcaaagcagttagatctatgtttccattgt
acagaggaacttgaacagtcagaccatacagaagaacagaaacagtcagagattgaacag
ccagcgcagactgaactgactgagttgacagaagaggatgcgcagacagagcattccaag
caggtagaagaattggaaccaaaagagtataaagaggattcatgtttgccgcctagggaa
ggaagtttagagcaactggagtctcaggtacagcaaacagaggcctcagaaccagtggtg
gtccatatgaatggtggagttttggacagggagaaggcctgcaggatggctgaaagactc
tacaggctggatgggatccacaagacagatgtggttaaacacctagacaaagacaatggc
tttagccaagctgttgggcaggagtacctcaagttctttgacttcaccggtcagagtcta
gaccaaggcctgaggtctttcctgagggtggtggtgctgatcggtgagacccaggagaga
gagcgagtactgcagcatttctcctgccgcttccagcagtgcaaccctcacaccttctcc
tcttcaggagaagtactcacactcacctgtgctgtgatgcttctgaactctgatctgcat
ggacagaatgtgggtaaagccatgtctgtgtccagcttcgtgtccaacctggatgggatg
aatgagggtgagaacttcagcaaggagctgttaaaggctctctacaacaccattaagaat
gagcctctggaatgggcagttgatgagaaggaactgaagagctccatgctgttggtggag
gacgctaaagaggatgcacccttgcgctccaagagcaacccgttccaagatgtgcctcat
gacaagaaggccacagtgttcaaacagggctttctcaaacgcaaggcccacgctgacatc
gatggcaaacgcactccttgggggaagagaagctggaagaccttctatggagtgctgaag
ggaatggtcctctacttacagaaggatgagtataatatggagtggcagagtacagaggag
gtggtcagtgtgcaccatgccctggcagagcaggcagcagactacactaagagaccacat
gtcttccgtctgcagactgccgactggagggtcttcctcttccaggcctcctccacagca
gagatgagttcatggatcagccgtattaacctggtgtcagccctgcactcttctcctccc
ttccctgctgctgtgggctctcagaggaggttctgcagacccattctgcctgcctcccag
tctgctcacacactggagagacagctgcagtcccatgctcgcatgctgctgtccttccag
gaggacctggcctacctgcagcagagtctccctgagagccgcaaggccaaggccaaggag
ctggaggaacaccgtgtcagagaggagtacctgcagcatgagaaatgtcgctacgaggcc
tacatccagatgctggaggtctggaagggtttgaatcagtcagtcgacactgaggtggga
accagcgagctcagcctgtttgacagagctgtgtgtaaggacacagtggatgaaaaggga
gaggagggaaccctgaagaagtcccactccagcccctccctggatgtggagatggcctta
ccccacgtggtcaaagtcaaacgcaacatctcggaaagacggacctatcgcaagatcgtc
atacctcgacgcaaccgggacatatga
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