Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408631
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Entry
139408631 CDS
T10872
Name
(RefSeq) far upstream element-binding protein 3-like isoform X1
KO
K13210
far upstream element-binding protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139408631
03041 Spliceosome [BR:
ocla03041
]
139408631
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
139408631
Spliceosome [BR:
ocla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
139408631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_PNO1_2nd
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
139408631
NCBI-ProteinID:
XP_071008846
LinkDB
All DBs
Position
5:complement(29461331..29485880)
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AA seq
596 aa
AA seq
DB search
MMMMAELVQGQASVAQPGTKADGFADALHRARQIAAKMGGDQMPHMNNSSPVLDPSLYGY
GGQKRSMDDGVGNQLGGMVHQRAIMTEDFKVPDKMVGFIIGRGGEQITRIQLESGCKIQI
AAESGGMMDRPCTLTGSPENIEQAKRLLSQIVDRCRNGPGFHSEMDGNSAIQEILIPASK
VGLVIGKGGDTIKQLQERTGVKMIMIQDGPMPTGADKPLRITGDPYKVQQARELVVEIIR
DKDQGDFRANRGDFGSRLGGSSLDVAVPRFAVGIVIGRNGEMIKKIQNDSGVRIQFKPVS
PSPSDDGISPDRIAQVMGQPDRCQHAVHLINELVHTAQDRDGFGGPVGPRGRGRGRGDWS
MGAPGGLQEVTYTIPADKCGLVIGKGGETIKNINQQSGAHVELQRNPPPNTDPNVRIFSI
RGTSQQMEMARQLIDEKIGASGMGGNSSFGLNPFGQGPATPHQNGPQTFMTGGWGTTYQT
WQPQGQQDPSLNGSQTDQMDYSKAWEQYYKKLGQQSQAQSSGPDYSKAWEEYYKKQNQAA
GPGSQQSSPPDYSAAWVEYYRQQGAYYGQGAQQTQAPGLQVRTHPNAQHHLHPTTT
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcggagctggtacagggacaggcctcggtggctcagcctggaacgaaa
gcagatggcttcgccgacgccttacaccgggcccgacagattgcagctaagatgggaggt
gaccagatgccccacatgaacaactcctctccagtcctagacccctctctctacggctac
ggaggccaaaagcgctcgatggatgatggagtaggtaaccagctaggtggaatggtacat
caaagggctattatgacagaagacttcaaagtgcctgataagatggttggattcatcatt
ggaagaggaggagagcagatcacgagaattcagttagagtcaggctgcaagatccagatt
gctgcagagagcggaggcatgatggacaggccctgcactctaactggaagcccagagaac
attgagcaggccaagaggctgctgagccagatcgtggaccggtgtcgaaacggcccaggc
ttccacagtgagatggacggcaacagcgccatccaggagatcctaatccctgccagcaaa
gtgggcctggtcatcggcaagggaggggacaccatcaaacaactgcaggagagaactggt
gtgaagatgatcatgatccaggatggccctatgcccactggagcagacaaacccctgaga
atcactggggacccctacaaagtgcagcaagcacgggagctggtggtagagataatccgg
gacaaggaccagggagacttccgggccaacaggggagactttggatccagactgggggga
agcagtctggatgtggcagtccccaggtttgctgtgggcatcgtcattggcaggaacgga
gagatgatcaagaagatccagaatgactctggggtcaggatccagttcaaaccagtgtcc
ccctctccttcagacgatggcatcagccctgaccggattgcccaggtgatgggccagcct
gatcgctgccagcatgctgttcacctcatcaacgagctggtccacacggcacaggatcgg
gatggctttgggggtcccgtgggccccagaggccggggcagaggccgtggggactggagc
atgggcgcacccggtggactgcaggaagtgacatacacgatacccgctgacaagtgtggc
ctggtgattgggaaaggtggcgaaaccatcaagaacatcaaccagcagtctggagcgcac
gtggagctgcagagaaacccgccgcccaacaccgaccccaacgtgcgcattttctccatc
cgtggcacctcccaacagatggaaatggcccggcagctgatcgatgagaagattggggcc
tcaggaatggggggcaacagcagttttggtctgaacccctttggtcaaggaccagctacc
cctcatcagaatggaccccagacattcatgacaggtggatggggcacaacatatcagaca
tggcagcctcagggccagcaggaccccagtctcaatggatcccagaccgaccagatggac
tattccaaagcatgggagcagtattataaaaagctaggtcagcagagccaagcccagagc
agtggccctgactacagcaaagcatgggaggaatactacaagaaacagaaccaggcagca
ggccctggctcccagcagagctcccctccggattacagtgctgcctgggtggagtattac
agacaacagggggcctactatggccaaggtgcacagcagacacaggccccaggccttcag
gtgagaacccatccaaacgctcagcaccatctccaccccacaaccacctga
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