Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408636
Help
Entry
139408636 CDS
T10872
Name
(RefSeq) dynamin-1 isoform X1
KO
K01528
dynamin 1/3 [EC:
3.6.5.5
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
ocla05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139408636
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
139408636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139408636
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139408636
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
139408636
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
139408636
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
139408636
RhoA-dependent endocytosis
139408636
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139408636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
PH
MMR_HSR1
DUF5130
Ldh_1_N
Motif
Other DBs
NCBI-GeneID:
139408636
NCBI-ProteinID:
XP_071008869
LinkDB
All DBs
Position
5:29596640..29678349
Genome browser
AA seq
862 aa
AA seq
DB search
MGNRGMEDLIPLVNKMQDAFSAIGQNSQLDLPQIAVVGGQSAGKSSVLENFVGKDFLPRG
SGIVTRRPLVLQLINCPTEYAEFLHCKGKKFTDFDEVRGEIEAETDRITGQNKGISPVPI
NLRVYSPHVLNLTLVDLPGMTKVPVGDQPADIEQQIRDMLYQFVTKDNCLLLAVSPANSD
LANSDALKIAKEVDPQGQRTIGVITKLDLMDEGTDAREILENKLLPLRRGYIGVVNRSQK
DIDGKKDITAAMAAERKFFLTHPGYRHLAERMGTPYLQKTLNQQLTNHIRDTLPGLRAKL
QSQLLSIEKEVEEYKNFRPDDPSRKTKALLQMVQQFSVDFEKRIEGSGDQIDTAELSGGA
RINRIFHERFPFELVKMEFNEKELRKEISYAIKNIHGIRTGLFTPDMAFETIVKRQIGKI
KEPCQKCVDMVISELVNTVRQCTQKLAQYPMLREEMEKIVTQHIRDRESRTKDQVMLLID
IELAYMNTNHEDFIGFANAQQRSSQVAQKKQTGSKQDEIMPERGAVNDRFKVIRKGWLTI
NNIGIMKGGAKEYWFVLTAESLSWYKDDEEKEKKYMLQVDNLRLRDVEKSFMSSKQIFAL
FNTEQRNVYKDYRQLELACESQEEIDGWKASFLRAGVYPERVTEKEGKSDSGDGENGSDN
LMHSMDPQLERQVETIRNLVDSYMAIVNKTIRDLMPKTIMYLMINNTKEFINAELLANLY
HSGDQNSLMEESQEQAHHRDEMLRMYHALKEALNIIGDISTTTITTAMPPPVDDSWLRPG
GNNSGGRSPAASPTPNRRAPPGPPGRPVSRGSAPGLPPGPPVPSRPGASPDPFGGPPPSV
PSRPNRAPPGVPSRRPPPSPTH
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggggaaccgggggatggaagaccttattcctctggtgaataaaatgcaagatgccttt
tcggccatcggtcaaaattctcagttggacctgcctcaaattgctgtggttggcgggcag
agtgcagggaaaagctcggtgttggagaacttcgttgggaaggatttccttcctcgtggc
tctggcatcgtcacccgtcgtcccctggtcctgcagctgatcaactgtcccacagaatat
gctgagttccttcactgtaaggggaagaagttcacagacttcgatgaggttcggggggag
atcgaggcggagacggaccgcatcactgggcagaataagggcatctcccctgtgccaatc
aacctcagggtctactccccacatgtcctgaacctgactctggtggacttgccggggatg
accaaggtcccagtaggggaccagcctgcggacattgagcagcagatcagagacatgttg
tatcagtttgtgacgaaggacaactgtctgctgctggctgtttccccggccaactctgat
ctggccaactcagatgccctgaagattgctaaagaagttgacccacaaggtcagaggacc
attggtgtgatcaccaagctggatctgatggacgaggggactgatgcccgagaaattctg
gagaacaagctgctgccactgcgaagaggttacatcggtgtggtgaacaggagtcagaag
gacattgatgggaagaaggacattacagcggccatggctgcagagagaaagttcttcctg
acccaccctggatacagacacctggctgaacgcatgggcaccccctacctacagaaaaca
ctcaaccagcaactgaccaatcacatccgggacactctgccggggctgcgggccaagctg
cagagccagctgctgtctatagagaaggaagtggaggagtacaagaacttcagacctgac
gacccctcccgcaagaccaaggccctgttgcagatggtgcagcagttctcagtggacttt
gagaagcgtatcgagggctctggggaccagatcgacacagcagagttgtcaggaggagcc
aggatcaaccgcatcttccacgagcgcttcccctttgagctggtcaagatggagtttaac
gagaaggagcttcgcaaggagatcagctacgcaatcaagaacatccacggcatcagaact
ggcctcttcactccggacatggcttttgagaccattgtgaaaaggcagatcggcaagatc
aaagagccctgccagaaatgtgtggacatggtcatttctgagctagtcaataccgttagg
cagtgtactcagaagctggctcagtaccccatgctgagggaggagatggagaagattgtc
acccagcatatccgagaccgcgagagccgcaccaaggaccaggtgatgctgctgattgac
attgagctggcctacatgaacaccaaccatgaggacttcattggctttgcaaatgcccag
cagaggagcagccaggtggctcagaagaagcaaactggcagtaagcaggatgagattatg
ccggagagaggagcagttaatgatcggtttaaggtgatcaggaagggctggctgaccatc
aacaacattggcatcatgaagggaggagcaaaggagtactggttcgtcctgaccgctgag
tccctgtcctggtacaaggacgatgaggagaaagagaagaagtacatgctccaggtggac
aacctgaggctgagggatgtggagaagagctttatgtccagcaagcagatctttgccctg
ttcaacacggagcaaagaaatgtatataaggactaccgtcagctggagttggcctgcgag
agtcaggaggagatagatgggtggaaggcctccttccttagagctggagtgtatcctgaa
cgtgtcacggagaaggagggcaagagtgacagtggagacggagagaatggctcagataac
ctcatgcactccatggacccccagctggagaggcaggtggagaccatccgcaacctggtg
gactcctacatggccatcgtcaacaagaccatcagggacctcatgcccaagaccatcatg
tacctcatgatcaacaataccaaggagttcatcaatgcggagctgctggccaacctgtac
cactctggggaccaaaacagcctgatggaggagtcccaggagcaggcccatcaccgcgat
gagatgctccgcatgtaccatgccctgaaagaggccctgaacatcatcggagacatcagc
accaccaccatcactaccgccatgccgccacctgtagacgactcctggctgaggccgggt
ggaaacaactccgggggcaggtctccagctgccagtcccactccaaacagaagggctccc
ccaggtcctcctggtcgccctgtctcccgtggctcagcccctggcctccctcctggtccc
cctgtcccctctcgcccgggggcctccccggatccttttggtgggccaccaccatcagtc
ccctccaggcctaaccgtgcaccccccggtgtgcccagccgaagaccccctccctcacca
acccactaa
DBGET
integrated database retrieval system
