Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408684
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Entry
139408684 CDS
T10872
Name
(RefSeq) protein turtle homolog A isoform X1
KO
K22655
immunoglobulin superfamily member 9
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
IGSF9
139408684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139408684
NCBI-ProteinID:
XP_071008997
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Position
5:complement(33854839..33892979)
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AA seq
1747 aa
AA seq
DB search
MGPKRDYFLDVTMVTALCLLWVTHGQKPEVRAKVGGVVEMACRLPLPYAGASVPLHVVEW
VRQGFDIPVLMKFGVYAPRVHPNYEGRVSLVRNTVLRVKGLLIEDQGLYECRILLLDKTT
DETRNGTWTLLSVTAPPIFSKTPPPVMEALVGNPLSLACVAHGNPPPTITWAKDGTLIEG
DKVEFLSGTLSLRAVNREAGGQYECLASNAEGNVTHVTKLKVKGPPVIVIPPKDTSLNMT
QDAQLQCQALADPPNMTYVWQREGENVYHIEALKSRVKIMVDGTLLITRITPDDSGDYTC
MPTNGLLTPPTASANLTVTHPAQALLMPPQTYLPTGLGGLVSCPVRAQPPLLHVDWTKDG
QPLDLAMYPGWTLTSEGSVFMATANDDATGVYTCTPYNSYGTMGQSGPTTVILQDPPSLS
VCPRKEYRQEVGRMLVIPCQTTGDPAPSITWSKVGPATRSQYSVAANGSLLLLPLSKDHQ
GEWVCSVTNRVATVKASTLISVLGTSPHAATLVSVTPGAKQANVSWEPGFDGGYTQKFTV
WLKQMSVGDSGEKQEWLSVPVPSSSGSSLQVTGLVPATEYQFSVLPHNKVGTGPFSEIAT
TRTLNPLPRRAKLEPPTSLSANQSLAGIVLQWSAYSQFLPITGFVLQSRTEQGEWFNLDE
DIGANRSAMIVPGLRKDCVYELRLLSRRGELLSEPSPSVNVSTMGMDMYPATSRFLEFVP
EPLLAGVMGGVGFLCLALILVLGTVCIFSHKRDQRRRKMTDDLPPAIYKSPPSTRSLASS
PDSVLKQKLLPPHCHPHYPGSHSSCSSSQSDHSSFGRPSHSEYKDQRQQLLSCPPPPPHY
AAHHHHHLPRIGSSPNSPLEFISRGPDGRFIVQPYDQASAPSSNTMRFLRKDFPQSTGVQ
RSVSLRSEKRVGREPPFVLSVDLPPCGGTDPNPTTRVRAMAKHLSLHGRFYLDEEQDSCA
GHPDKSSLYSDSNSDMSPQPSLEESNPGYPSLKRAVQPATASTLVLQMEHEKETGNLSRC
LKLAREREELERELRKYTLDSNATLDGKREGPGSNEVRWREFEECDPIWKPQDNTSPHSH
PHHLSHPHHLSHPQVNRGCSSMAKGPSPPSYIHWEASPLTSATSLVPAHQTPSDRTAVLH
CDPPLTQCPSLSPVTQHPFNSERPECHSKRRVSQQPLDRQEGMETARVKTHTGLCDETHI
STELKRGDLESHEWNGKNNQCNVSISHKSKPDVSVHKVPGSWRVELARSQPCEESSLHTL
VDLSECVEMTVDEPEDEGSVDPPTNPIRHQRHVHQVNNESPLAEKDHRGPQTMKGHRAHP
LSHRKSPVPREEREKWHRRSSRSRSPATIQPPRPALRKAISLGGFQNRNGGNHQRSQSLD
SRRQSMGNFLTPDAWVDSLSQENCSSPFSFRPDSVFFEPENSLAPETPTHTEAPLASLPP
PPPPPPHQDTRPPSRAPQQLCEAYGGDMHIQSVRRPVLERQTQLPPTPPSVPSSPSHPTH
DPRKKASIFPDAYRWPITYQEALRSVQRMEARKNVSLPRDHREHPRPPDCRGRTTAPSLL
RGYSWPAPHHTPQPPQEEEKKQEEVVVEEEKEERYGGHEVEIGRYHRGVPDLGGSYSSYA
SQSSGRGSLETPNGRMSICLSPTLTSSPESTEEMQGNTVESHLQDMETLKRRKASVDENY
EWDSADVSIQLGDQDLEGRGLFSSVSLLKSTPSMHHSREGLKESVHFQGHRHVTNRHSEP
EPETVMF
NT seq
5244 nt
NT seq
+upstream
nt +downstream
nt
atgggaccaaaaagagactattttctggatgttaccatggtgacggcactgtgccttctg
tgggtcactcacggtcagaagccagaggtgcgtgccaaggtagggggtgtggtggagatg
gcgtgtagactgccactcccttacgcgggtgcgtctgtgcccctgcacgtggtggaatgg
gtgcgccagggattcgacatcccagtcctgatgaagtttggagtgtatgctcctcgggtg
catcccaactatgagggccgtgtgtctttggtgaggaatactgtcttgagggtgaagggg
ctcctcatagaggaccagggcctgtacgagtgtcgcatcctcctgctggacaaaaccaca
gatgagacccgcaatggcacctggaccctgctgtctgtcaccgctcctcctattttcagc
aagacccctccccctgtcatggaggctctagtggggaatcctctctctctggcctgcgtt
gcccatggtaacccaccacccaccataacctgggctaaagatggtactctcattgaagga
gacaaggttgagtttctgagtgggacgctgtctctcagagcagtgaacagggaggcagga
ggacagtatgaatgtctcgcctccaatgcggagggcaatgtgactcatgtgacaaaactt
aaagtcaaaggtcctccagtcattgttatccccccgaaggacacctccctcaacatgacc
caggatgcccagctgcagtgccaggctttggctgatcctcccaacatgacctatgtgtgg
cagagggagggagagaatgtctaccacatagaggctctgaagtcccgtgtgaagatcatg
gtggacggcaccctcctcatcacccgcattaccccagatgattctggggactatacctgc
atgcccaccaacggactgttgactccgcctactgcatctgccaatctcactgtgacacac
cctgcccaggctctcctgatgccaccgcagacatatctccccacaggcctgggaggtctg
gtctcctgccccgtgagagctcagccacccctgctccacgtcgactggaccaaggatgga
cagccactggatctggccatgtacccaggatggacgttgacatctgaaggctcggtgttc
atggctactgccaatgatgatgcaacaggcgtatacacgtgtaccccctacaacagctac
gggaccatgggccaatcagggcccacgacagtcatcctacaggaccccccgtcactcagc
gtgtgtccccgtaaggagtatagacaggaggttgggagaatgcttgttattccctgccag
accactggagatccagcccctagtataacctggagcaaggttggacctgccacacgctct
cagtactctgtagcagctaacggctccctgctgctgcttcctctcagtaaagaccaccag
ggggagtgggtgtgcagcgttacaaaccgcgtggccactgtcaaagccagcactctcatc
tcagtgctgggcaccagtccccatgctgccaccctggtgtctgtcactccaggggcgaag
caggccaatgtctcctgggaaccaggctttgatgggggatacacccagaaattcacagtc
tggttgaagcagatgtctgttggtgacagtggggagaaacaggagtggctctctgtgcct
gtgccctcgtcctctggctccagtctgcaggtgacggggctggtccctgccacagagtac
cagttcagtgtcctgccacacaacaaagtgggcactgggcctttcagcgaaatcgccacc
acccgaactctgaatccactcccaaggagagcgaaactagagccacccacatcgctgtca
gccaatcagagcttggcaggtatagtcctgcagtggtccgcctattctcagttcctgccc
atcactggatttgtcctccaatcgcgcactgagcaaggggagtggttcaatctggacgag
gacatcggtgccaataggagtgcgatgatcgttccaggtctgcgcaaggactgtgtgtac
gagctgcggctgctgtcccggcgaggggagttgctgagcgagcccagtccatcagtcaac
gtctccaccatggggatggatatgtaccctgccacttcccgcttcctggagtttgttccc
gagccgctattggctggagtgatgggcggcgtgggcttcctgtgtttggccctcatcctt
gtcctgggaaccgtgtgtatcttcagtcacaagagagaccagcgacgcaggaagatgaca
gatgatctccctcctgccatctataaaagccccccctcaaccaggtcgcttgctagcagt
ccagacagtgtgctgaagcagaagctcctccctccccactgccacccccactatcccggc
tcccactcctcctgctcctcctcccagtcagaccactcctcctttggcagacccagccac
agtgaatacaaggaccagcgccagcagctgctctcctgccccccaccccctcctcactat
gccgcccaccaccaccaccacctccccaggataggctcttcccccaattcccctctagag
tttatctctagaggtccagacggtcgcttcattgtgcagccctacgaccaggcctccgcc
ccttcctccaacaccatgagattcctgaggaaagacttcccacaatccactggggtccag
aggtcagtgtcccttcgctctgagaagagagtggggagggaaccgccttttgtcctctca
gtggacctacccccctgtggtggaactgaccccaaccccacgaccagggtccgggccatg
gccaaacacctctccctccacggacgcttctacctggatgaggagcaggacagttgtgct
ggacatccagacaagagtagtctctactcagacagtaactcagacatgtccccccagcca
agcctggaggaaagcaatccaggatacccatccctaaagcgggctgtccagccagccact
gccagcaccctggtcctgcagatggagcatgagaaggagaccggcaacctgagcaggtgt
ctgaagctggcccgggagagagaggagctggagagagagctacggaagtacacacttgat
agtaacgctactttagacgggaagagagagggaccgggcagcaacgaggtgaggtggaga
gaatttgaagagtgcgatccaatatggaaacctcaggacaacacttcaccacacagtcac
ccccatcatctcagtcacccccatcatctcagtcacccccaggtcaacagggggtgctca
agcatggccaaaggcccttcacccccatcctatattcactgggaggccagccctctcact
tcagccaccagccttgtcccagcacatcagaccccctctgataggacagcggtcctccac
tgtgaccctccactcacccagtgtccctctctgtcacctgtcacacaacaccccttcaat
tcagagagaccagagtgtcactctaagaggagggtgagccaacagccactagacaggcag
gaagggatggagactgcaagggtcaagacacacacagggctttgtgatgaaactcacata
tcaacagagctgaagagaggtgacttggagtcacatgaatggaacggcaagaacaatcaa
tgtaatgtcagcatttcacacaagtctaagccagatgtctctgtccacaaagtgcctggt
tcatggagagtggagttagcaaggtcacagccatgtgaagagtcatctctacacacattg
gttgatctctcagaatgtgtagaaatgactgtggatgaaccagaggatgaaggctcagtg
gatcctcctacaaatcccataaggcaccagagacatgtccatcaggtaaacaatgagtcc
ccattggctgagaaagaccacagaggaccacagaccatgaaaggccacagagcccatcca
ttgtcccacaggaaaagcccagtgcctagggaggagcgggagaagtggcacaggaggtca
tctcggagcagaagcccagctaccattcagcctcctaggccggcgctcaggaaggctatc
agtctaggaggctttcagaacaggaacggcggcaaccaccaacgcagccagagtctagac
tccaggagacaatccatgggtaacttcctgacgcctgatgcctgggtcgactctctcagc
caggagaactgctcctctcccttctccttccgcccagactctgtcttctttgaacccgaa
aactccttagctcctgagacccccactcacacagaggccccccttgcttctctgcctccc
cctcccccgccacctccccaccaggacacccgacctcccagcagggccccacagcagctc
tgtgaagcatatgggggtgatatgcacatccaaagcgtaagaagaccggtgctggagaga
cagacgcagctccccccaacccctccttcagtgccttccagccccagtcatcccacccac
gaccccaggaagaaggcttccatcttcccagatgcctacaggtggcccatcacctaccag
gaggccctgaggtcggtgcagcgcatggaggccaggaagaatgtatctctccccagggac
cacagggagcaccccagacccccagactgtagaggcagaaccacggctccctccctgctc
aggggttacagctggcctgcacctcaccatacccctcagccaccccaggaggaggagaag
aagcaggaggaggtagtagtggaggaggaaaaggaggagaggtatgggggacatgaggtg
gagattgggaggtatcatcggggagtgccagacttgggggggagctacagtagctatgcc
agccagagcagtggcagggggagtctggagactccaaacgggcgaatgtccatctgcctg
tccccaaccctcaccagctctcctgagtccaccgaggagatgcagggaaacacagtggag
tcacacctacaggacatggagacattgaaaaggagaaaggcctcagtggatgagaattat
gagtgggattcagctgatgtgtccattcagctgggagatcaagaccttgaaggcagaggc
ctattctcttcagttagtctactgaagtctactcccagcatgcaccattccagggagggc
ctcaaagagtcggtccacttccagggtcatcgccatgtgaccaaccgccactcagaaccc
gaaccagagactgtgatgttctga
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