Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408731
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Entry
139408731 CDS
T10872
Name
(RefSeq) uncharacterized protein isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139408731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139408731
Membrane trafficking [BR:
ocla04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
139408731
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
139408731
NCBI-ProteinID:
XP_071009084
LinkDB
All DBs
Position
5:complement(36099366..36125908)
Genome browser
AA seq
1544 aa
AA seq
DB search
MSLSDQSQQWYPTSVQVTVLQARSLRIKGKNGTNDSYAIMQVAKDKFATSVAEKSVAPVW
KEEATFELPLFHNGNTEKCTLHVHVMHRALVGSDKLLGHAVINLLELSEVKSRNKTEWHK
LLDKAGKPDKDRGEVLVDIQFMKNNLTASMFDLSATDKPRSRLGKFKDKVRGKKKEGLSD
SASAVVPSFTQVLTDSEGEGEGEGCADKEEKKKKNKLKSLFSPKSNLQRHGLSQSMSVLG
PLPEKDSSLSGSPSSGLNEDSSEGKNKFKFLTHKRTGSSDSKASQGSLSLGRSKIHAPLA
EQSNLCINGSHLYTEHPHPRSARTGSTFSLASSGHGSMEDLRRAQGRKSSSNSMDSLTAL
KQPSPWAEGESSRAEEEEEEEEERVKMDEMKRKEEQERKKLEEERMRKEEQEKRRIGKEV
ERLRFEEEEKTRKEEQENRKRMEEEEKIRVEEESRMMEERKRRLKEEGEERVKKKEQEII
RLQEEQERWEEEERMRREEHERMKREDRLRKDDERKMREEEERLKREKEERIKEEEERIR
REQEEDMQRREERQRKMREEEERVKREQDRLREEERRVREEEERVRKAKEEDRLRAEMGI
KRTEEERIKREEEDRLRKEEEERKIRKEEERIRILEEEMLRKNEEQRKIRKEEERIRILE
EEMLRKDVEQRKIREEEERIRILEEEMLRKDEEQRKIRKEEERIRILEEEMLRKDEEQRK
IREEEERIRILEEEMLRKDEEERKIREEEERIRRLEEERLRKEETETMRLEEERGNEQER
SDKEQKERFRVEEENMKTEELRQEEKRRNAQMEEEQRREEAEQRREEARAPLEEVEKQME
QYSKSKVTVCNNPFEEVSPFSSFDDSSSNNLFEENPMTTTGPISCRINKVSAVKPRPSSW
GNPSKPAISSNPFLSSSSPDLESSMDSPRGARENRDAIDPSTNLMEKKDPAPVAPINQPW
ARKDNWSSKSHCATPTLAKTKPTKPPPPLRCQSSTALVGSGDDQGSVSGKDHSSVRQDKG
PAPLPPDNQRWAHKDNWPSKSNPGSATPTLTQKPPTKPQPPPRRHSATSLVGSEHDLHLN
ESVSQDDSGVRRDKRPAPLPPDRPNQAPSQTQRDQSMTSVNQGHKDRVGASMSKVSQRVV
QMITPLRSSSTATTEHISGGQSSTHHGNQAEEPMPSATGGLVVVKHNKGPAPSRPQHLPG
KTMPTVDVLDEQSNTEEHDSSVEFGPNNPFAEDCRMEKSSGCGVEQSLTGERQGSPHSHN
QQSCTSTDADLGLFQKRVVGDTTELPTPDVLPAEDVSCPTKSTSVKRARAPLPPVKITST
FREEGAGKQSSGKLQSPGAPTSSKLSSGNWVKKQNGGVGVALPCVTLAQPPCFPSPAPSS
IPHPEPLKGSGGRRDCPPQTTSSVPGQKTLLHAGALPAITEQYSGEEAGGRGDRSASSTR
RPHPVKPLSSLENQPASNIHEGQAGKSTGILGGLQEKIKVKDTGVKGPYSQLTQEELISL
VLKQQEQLSKRDDKIKELEQYIDNLLVRIIEEQPSILMTMNSLK
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atgtctctatcggaccagagccaacagtggtatcccaccagcgtacaggtaactgtgctt
caggcaagaagcctgaggataaagggaaaaaatggcaccaacgactcatacgccatcatg
caagtggccaaggataaattcgctacgtcggtggcagaaaagagtgtggcacccgtgtgg
aaagaggaggccacgttcgagctgccgctcttccacaacggtaacacagagaagtgtacg
ttgcatgtccacgtaatgcaccgggctctcgtgggatcggacaagttgctcgggcacgca
gtcatcaacctgttggagctcagcgaggttaaatcccgcaataagactgaatggcataag
ctgttggataaggcaggcaagccagacaaagacaggggagaggtgctggtggacatccag
tttatgaagaacaacctgacagccagcatgttcgacctctctgctacagacaagccgcgc
tcccgcctgggcaagttcaaggacaaggttcgaggcaagaagaaggagggtctgtcggac
tcagcgtctgccgtggtgccgtccttcacccaggttctgacggacagtgagggagagggg
gaaggggagggatgtgcagacaaagaagagaaaaagaagaaaaacaagctgaagtctctg
ttttcccccaagtctaatctgcagcgtcacggactgtctcaatccatgtctgtcctgggc
cctctgccggagaaggactcctcactgagtggcagcccctcctcaggcctcaatgaggac
tcctctgaaggtaaaaataaattcaagtttctgacccacaagcgcacaggcagttccgac
agtaaggcttctcagggctccctgtctctagggcgctctaagatccatgccccgcttgca
gagcagagtaacctgtgcatcaacggcagtcacttgtacacagaacatccccatccccgg
agcgcacgcaccggctccaccttcagccttgccagctcaggccatggttccatggaagac
ctacgcagggcccagggccgtaagagctccagcaactccatggactctctcacggccctg
aagcagccctcaccctgggcagagggggagagcagcagggcagaagaggaggaggaggag
gaggaagaaagagttaagatggatgagatgaagcgaaaggaagagcaggagagaaagaag
ttagaggaagagaggatgaggaaggaggaacaagagaaaaggaggattgggaaggaggta
gaaagacttaggtttgaggaggaagagaaaacaaggaaggaggagcaggaaaacagaaag
aggatggaggaggaggaaaagattagggttgaggaggaaagtagaatgatggaagagagg
aagaggagactgaaggaggagggagaggagagggtaaagaagaaagaacaggaaattatt
aggttacaggaggaacaagagaggtgggaagaagaggaaaggatgaggcgagaagagcat
gaaagaatgaagagggaggatagactgaggaaggatgacgagaggaaaatgagggaggag
gaggaaagattgaagagggagaaagaggagaggattaaggaggaggaagaaaggattagg
agagaacaagaggaagatatgcaaagaagggaggaacggcagaggaagatgagggaggag
gaagaaagagtgaagagagagcaggataggctgagagaagaggagagaagagtgagggag
gaggaagaaagagtgaggaaggccaaggaggaagataggctgagagcagaaatggggata
aagaggacagaggaggaaagaattaagagggaagaggaggataggctgagaaaggaggaa
gaggagaggaagatcaggaaggaggaagagaggataaggatattagaggaggagatgttg
aggaagaatgaagagcagaggaagatcaggaaggaggaagagaggataaggatattagag
gaggagatgttgaggaaggatgtagagcagaggaagatcagggaggaggaagagaggata
aggatattagaggaggagatgttgaggaaggatgaagagcagaggaagatcaggaaggag
gaagagaggataaggatattagaggaggagatgttgaggaaggatgaagagcagaggaag
atcagggaggaggaagagaggataaggatattagaggaggagatgttgaggaaggatgaa
gaggagaggaagatcagggaggaggaagagaggataaggagattagaggaggagaggctg
aggaaggaggaaacagaaacaatgaggcttgaagaagaaaggggcaatgaacaggagagg
agtgataaggagcagaaagaaagatttagggtagaggaagaaaatatgaaaacagaggag
ttgagacaggaagagaaaaggagaaatgcacagatggaggaagagcaaaggcgtgaggag
gcagagcaaaggcgtgaggaggcgagggcaccgttggaggaagttgagaagcagatggag
cagtatagcaagtcaaaggtcaccgtgtgcaataatccttttgaggaagtctctcccttc
agttcatttgatgacagctcttcaaataatctgtttgaggagaaccctatgaccactact
ggacccatcagctgccggataaataaagtatcagcagtcaagccaagaccctcttcatgg
gggaacccttcaaagcctgctatatcttccaaccccttcttatcgtcctcgtctcctgac
ctggagagttctatggactcccccagaggcgcaagggaaaatagagacgctattgacccg
tctactaatctgatggagaagaaagaccctgcccctgtggctcccatcaatcagccctgg
gctcgtaaggacaactggtctagtaaatctcattgtgccacacctaccctcgctaaaaca
aagccaacaaaaccgccccctcccctcagatgtcaatcttctacggcattggtgggaagt
ggggatgaccaggggagtgttagtggtaaggaccattccagtgtcagacaggataagggc
cctgctccactgcctccagacaaccagcgatgggctcataaagacaactggcccagtaag
tccaaccctggttctgccactcctaccctcacccaaaaaccgccaacaaaaccgcagcct
cctccaagacgccactctgccacgtcattggtgggaagcgaacatgacctgcacttaaat
gagagtgttagtcaggatgattccggtgtcaggagggacaagcgtcctgctccactgcct
cctgacagaccaaaccaggctccaagccagacacagagggaccagagtatgaccagtgtg
aatcagggacataaggacagagtgggtgcctccatgtccaaagtttctcaacgtgtggta
cagatgatcacgccactgagatcttcctccacagctacaacagagcacatcagtggaggc
cagagctctacccaccatgggaaccaagcagaggaacccatgccatcagccactgggggg
ttggtggttgtgaaacacaataaaggtccagcaccctccaggccccagcaccttccaggg
aagacaatgccaacagttgatgtgttagatgagcaatcaaatactgaggaacatgactct
tcggttgagtttggtccaaacaatccctttgcagaagactgcagaatggagaagtcctct
ggatgtggtgtagaacagagtctaactggtgagcgccagggtagcccgcactctcacaat
caacagagttgtacctccacagatgcagatctaggtctgtttcagaagcgtgtggttggg
gacacaactgagcttccaacgccagatgttctgccagccgaggatgtctcctgtcccacc
aaaagcacatcagtgaagcgggcccgtgctcccttgcctccagtgaagataacatccacc
tttagagaggagggagctggtaaacagagttctggaaaactacaaagcccaggggctccc
acttcgagtaagctttcctcaggtaactgggtaaaaaagcagaatggcggggtgggtgtg
gcactaccatgtgttacacttgcccagcccccatgtttcccctcacctgccccctcctcc
ataccccaccccgagcccctgaagggatcagggggcaggagagactgccctccccagaca
acaagctctgtccctggccagaagaccctgcttcatgctggagctctgcccgccattaca
gagcagtacagtggagaggaggcaggagggagaggggacaggtctgcctcaagcacacgc
aggccacacccagtaaagcccttgagttccctggaaaaccagccagcttccaacatccat
gagggacaggctggcaaatctacagggatcctcggtggccttcaagagaagataaaggtc
aaagacacaggggtcaaaggtccctactcccagctgacccaggaagagctgatctccctg
gtgctaaagcagcaggagcagctctccaaaagggacgataagattaaggagctggagcag
tacattgacaacctgctggtgcgcatcatcgaggagcaacccagtatcctgatgaccatg
aactcactcaaatga
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integrated database retrieval system
