Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408767
Help
Entry
139408767 CDS
T10872
Name
(RefSeq) ARF GTPase-activating protein GIT2-like isoform X1
KO
K12487
G protein-coupled receptor kinase interactor 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139408767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139408767
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
139408767
Endosome - Golgi transport
Arf GTPase associated proteins
139408767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIT1_C
GIT_CC
GIT_SHD
ArfGap
Ank_2
Ank
Ank_4
Ank_5
Talin_IBS2B
Ank_3
TTRAP
DUF7783
Motif
Other DBs
NCBI-GeneID:
139408767
NCBI-ProteinID:
XP_071009165
LinkDB
All DBs
Position
5:37355509..37377707
Genome browser
AA seq
748 aa
AA seq
DB search
MSKRLRNNRDCQVCADCSAPGPCWGSVNRGVLVCDECCSIHRGLGRHSSQVRHLTHTPWP
PSQLQMVQTLYSNGSNSIWEHCLLDPSSISSGKRKANPQDRVHPHKTEFIKAKYQMLAYV
HRMPCREDDSVTTKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKA
GQVSQAELLAVYGADPDALDMGGKTPIDYARQAGHQELADRLVEIQYELTDCLAFYLCGR
RPDHRNGQHFIIPQMADRSLDLSEFAKAAKKKLQSLTNHQFEELAMDVYDEVDRRETDAV
WLVTQNHGTLVTDTTVVPFLPVNPEYSSTRNQGRQKLARFNAHEFATLVIDILTDAKRRQ
RGNSCKSPREDIELILKGINSRHGSDNQDNEDQPDYDSVASDEDPEREPAPGKNGKDGRT
KSSESSDLSDGPITLHEFMEVKSALTASEAKIQQLLKVNCHLSEELQLMQSKLNSLQTEK
SSLRWQTPSGQQHPQDLSGRPPLPGGRPMSMYETGSAMRQYPHRGVPPRRDDSLTVQPLP
TNIGRGPLGNASSSLPTFPSSLSWSRDERARRGCSLEGQSRMLESDYDNTPNHTGLEESG
MGRNSSWLGDSSTAEQGEDETEADSTLPCTEDVICKTEQITKNIQELLRAAQENKRESFV
PCSERIHVAVREMAILFPKRPCSDTVRGSLRLLTSSASRLHGECQKASPHNPCPSDMQLV
TQQVIQCAYDIAKAAKQLVTVTTKENSN
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcgtctgcgcaacaacagagactgtcaggtctgcgctgattgtagcgccccg
ggcccatgttggggctcagtgaacaggggtgtgctggtctgtgatgagtgctgcagcatc
caccggggtctgggacgacacagttcccaagtccgacacctgacccatacaccatggccc
ccctcccaactacagatggttcagacattgtacagcaatgggtccaactccatctgggag
cactgccttctggatccctcgtctatctcgagtgggaaacgcaaggccaacccccaggac
agagtccatccccataaaacggagttcatcaaggccaaatatcagatgctggcttatgtc
catcgaatgccctgtcgagaggatgacagtgtcactacgaaggacctcagtaagcaactc
cactccagtgttcggactgggaacctggagacgtgcctgagactgttgtctttgggagcc
caggccaacttcttccacccggaaaaaggaaacactccgctgcatgtagcagctaaggca
ggccaggtgtcgcaggcagagttgctggctgtgtatggggcggatcccgatgccctagac
atggggggtaagacccctattgactacgcaagacaagcagggcatcaggagctggcagac
agactggtagagatccagtatgaactcactgactgcttggcattttacctctgtgggaga
aggccagatcatagaaacggacagcacttcataattccacaaatggctgaccgcagtctg
gatttgtcagaatttgcaaaagctgcaaagaaaaaactccagtctctcactaaccatcag
tttgaagagcttgccatggacgtttatgatgaagtggacagaagagaaactgatgcagtg
tggctggtgactcagaaccacggcactctggtaacagacacaactgtggtgcctttcctc
cctgtcaaccctgagtactcatccaccagaaaccagggccggcagaagctagcgaggttc
aacgcacatgaatttgcaacactcgtcattgatatattaactgacgccaaacgtcggcaa
cgtgggaactcctgtaaaagtcccagagaggacatagagctcatcctgaagggaatcaac
agccgtcacgggagtgataaccaggataatgaagaccagccagattatgacagtgtggcg
tctgatgaagatccagagcgggaaccagcccctgggaagaatgggaaagatggcagaacc
aagagctccgagtcgtcggacttgtctgatggccccattacgttacatgagttcatggag
gtgaagagcgccctcacggcctccgaggccaagatacagcagctgctcaaggtcaactgt
cacctgagtgaggagctccagttgatgcagagcaagctgaactccttgcagactgagaag
tcctccctgagatggcagacacccagtggccagcagcacccccaggacctctccggccgc
ccccctctccccgggggccgccccatgtccatgtatgaaacgggctcggccatgaggcag
tatccccacaggggcgtgcctcctcgccgtgacgacagcctcaccgtccagcccctccct
acaaacattgggaggggtcctttggggaacgcctcgtcctccctccctaccttcccctcc
tccctgtcctggtcgcgggacgagcgagctcgaaggggttgtagcctggagggacagagc
cgcatgctggagagtgactatgacaacacaccaaaccacacaggactggaggagtccggt
atgggcaggaacagcagttggctcggggatagcagtacagcagagcagggggaggatgag
actgaggctgactccaccctgccctgcacagaggacgtcatctgtaagacggagcagatc
accaagaatattcaggagctgctgagggccgcacaggagaacaaacgtgagagctttgta
ccgtgctcagaaaggatccatgtggctgtgagagagatggccatcctgtttccaaagagg
ccatgctcagacacagtgcgagggtctctgcggctgctcacctctagtgccagccggctc
catggggagtgccagaaggcctcgccccacaacccttgcccctccgacatgcagctggtc
acgcagcaggtcatccagtgtgcctatgacattgccaaggctgccaagcaactcgtcact
gtgacaaccaaagagaacagcaactga
DBGET
integrated database retrieval system
