Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408783
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Entry
139408783 CDS
T10872
Name
(RefSeq) nuclear pore complex protein Nup155 isoform X1
KO
K14312
nuclear pore complex protein Nup155
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139408783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139408783
NCBI-ProteinID:
XP_071009202
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Position
5:complement(38474935..38493120)
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AA seq
1391 aa
AA seq
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MPSTLGPSSPAAALAEALESSGRLIDRHLQDDRCFPDLSELLNVPSHNMPSLSGGSDMDY
PLQGPGLISVPNLPELSAVRRVPLPPELVEQFSHMQCNCMMGVFPEICRAWLTIDNDIFM
WNYEDGGDVAYFDGLSETILSVGLVKPKAGIFQPHIHFLLVLATPVDVVILGLSFPKAQA
GLNDSMSGGMQLLPDPLYSIPTDNTYLLAITSTDLGRIFLAGKDGCLYEVAYQAEAGWFS
QRCKKINHSKSSLSFLVPSLLQFSFSEDDPVVQIAIDNSRNTLFTRSEKGVLQVYDLGVD
GQGMSRVAAMSQSSIVAAAGNVARTIDRSVFKPIIQISVIDRSESSDCHLLAVTHAGVRL
YFSTAPFAPPHAKQPGARPCLLALVHVRLPPGFSASSTLQKPAKVHKALHSKGVLLMAAS
ETEDSDILWCINHDSFPFKKPLMEAQMMSNVDGHSWALCAIKEEKAPKISTPLNKDQVPL
TDSPVVVQQHNVPPQKFVLLSAKGSHIFHKLRPVDQLRHLLVSGTGGESEEVERFFKLHR
EEQACATALIVACSSAACDREVSQWATRAFFRYGGEAQMRFPSAHSAPSNVGALFGSPVP
GSPMPVGSSPMHNPSFLATPVPGMMPQSVSTPYIPAMPMPSAPITGMSSGPEVVFSGKHN
GISVYFARIMGNIWDGSLAVEKTISKGNQAVSILESTASSSDLESVLLELRGLKDFLDKN
SQFSPSSLGAASFSSPANLQQRLLGFMRPDGGASSQQVQQELQRKYHTEAQAYEKMSLQG
IQQLVHRSCQTLALWKLLCDHQFSLIISELPMEFQDQMKGASFKDVVIRGRELTGALITA
LINVYIKDSASVDAISNHLRDICPLLYSSDDSVCSKANELLQGSRQIQTKIDKERTLRES
LQLYQLISQHTDLPLVCSQYRQVRFYEGVLELCLTAADKKDPQRLGPHFYKNGEPEEDQA
GALAFQERLSCYKCITDTMQELVNQSKAAPQSPSVPKQPGPPVMTSDPNMLSNEDATAHF
EQVIGLAQRSQDELFHIALYNWLIQADLTDKLLEVNSPYLEEHLMHMIKQDQSKVRNMDL
LWRYYEKSRSFGKAAHVLARLADMHSTEISLKQRLEYISRAILSAKSSSCISAQGAEGEF
LHELEEKMEVVRIQVQIQETLSRRYSQHPSVQGAMSQLDSELMDITKLYGEFADHFRLSE
CKLAIIHCAGHSDPILVHSLWQEIMEKELGDSVAMSPADRMRALSLKLVSLGKIYAGTPR
YFPLEFLVKFLEQEVCHLNWDVGFVTFTMQEIGVQLPRLLEVYDQLFKTRDPCWQRLKKP
LHLVECIHVLLSGYVEDPSRVPTYDRRRFTNVCLDNICGYLVELQSLSPNSTLRLTIGNF
KALQAKLEKVH
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccaccttgggacccagcagtcctgctgctgcccttgcggaagcgctggagagc
tctggccggctcatagacagacacctccaggatgaccgctgcttccctgacctctcagag
cttcttaatgtcccctcacacaacatgccatctttgtctggggggtcagacatggactac
cctcttcagggacctgggctgatcagcgtgccaaaccttcctgagctcagtgcagtccga
agggttcccctaccccctgagctggtggagcaattcagccatatgcagtgcaattgtatg
atgggagtttttcctgaaatctgtcgagcatggctcaccattgacaacgatatcttcatg
tggaattatgaggatgggggggacgttgcatattttgacggactcagtgaaaccatcctg
tccgtggggctggtcaaacctaaagcagggattttccagccacacatccacttcctgttg
gtcctagccactcctgtggatgtagtgatcctggggctcagcttccctaaagctcaagca
gggttgaatgacagcatgtctggagggatgcagttactaccagacccgctgtactccatc
cccacagacaacacctacctcctggccatcacctccaccgacctgggccgcatcttcctg
gcagggaaagatggctgcctgtatgaggtagcctaccaggccgaggcaggctggttcagc
caacgctgtaagaagattaaccactccaaaagcagcctgtccttcctagtcccctctctg
ctccagttctccttctctgaggacgacccggtagtgcagattgccattgacaactcccgt
aacacactcttcacccgctcagagaagggggttctacaggtgtatgatctaggtgtagat
gggcagggtatgagccgtgtggcggccatgtcacagagttccatcgtggctgcagcagga
aacgttgccaggaccatagatcgctctgtgtttaaacccatcattcagatctctgtgata
gacagatcggagtcgtccgactgccacctgctggctgtcactcatgcaggagtgcgtctc
tacttcagcaccgctccctttgccccaccacatgccaagcagccaggggcacgcccttgt
ctgcttgctctggtccatgtccgcctgcctccaggcttctctgcgtcctccaccctgcag
aagcctgccaaggtccacaaggctctgcacagcaaaggagttctcctgatggcagcgtct
gagactgaggacagtgacatcctgtggtgcatcaaccacgactccttcccctttaagaaa
cccctgatggaggctcagatgatgtccaatgtagatggccactcctgggcgctttgtgcc
atcaaggaggagaaggcacctaaaatctctacccccctgaataaggatcaggttcccctc
actgactctcctgtcgtggtgcagcaacacaatgtccctccgcagaaatttgtccttctc
tctgccaagggaagtcacatcttccacaagttgcggccggtggaccagctgcgccaccta
ctggtgagcggtactggtggagagagtgaagaagtcgaacgcttcttcaaactgcacagg
gaggagcaggcgtgtgccactgctctgatagtagcctgttctagtgctgcctgcgacaga
gaggtgtctcagtgggccaccagagccttctttaggtatggaggagaggctcagatgagg
ttcccctcggctcattctgctcctagcaacgtcggcgctctgttcggctctcctgtacca
gggtcccctatgccggttggtagcagtccaatgcataaccctagtttcttagcaacgcct
gttccaggtatgatgccccagagtgtgtctacgccctatataccagccatgcccatgccc
tccgcccccatcactggcatgtcttctgggccagaggtggtcttctcagggaaacacaat
ggcatcagtgtctacttcgcacgcataatgggtaatatttgggacgggagtcttgctgtt
gagaagaccatcagtaaaggaaatcaggctgtcagtattttggagagcacagccagctca
tctgatctggagtcagttcttctggaactccgtggtctgaaggacttcctggataagaac
tcccagttcagcccctcgtctctgggggcagccagtttcagctctccagccaatctgcag
cagcgtctgctgggcttcatgcggcctgatggaggagccagttctcagcaggtccagcag
gaactccagaggaagtaccacaccgaggctcaggcctatgagaagatgtccctgcagggt
atccagcaactggtgcatcgctcctgtcagaccctggcactgtggaagctgctgtgtgac
caccagtttagcctcatcatctctgaactacccatggagttccaggaccagatgaagggg
gcgagttttaaggacgtggtgatccggggtcgagagctgaccggagctctgatcacagcc
ctcatcaacgtctacatcaaagactccgcctctgtcgacgccatcagcaaccaccttaga
gacatctgtcctttgctgtacagcagcgacgacagcgtctgctcaaaggctaatgagttg
ctgcagggctccagacagatccagactaagatcgataaggagagaacactgagagagtca
ctacaactctaccagctgatcagccaacacacagacctgccactggtctgctcccagtac
agacaggtgcgtttttatgagggggtgcttgagctgtgcctgactgcagcggataagaag
gatcctcagaggctgggacctcacttctataagaacggagaaccagaggaggaccaggct
ggagcactggccttccaggagaggttgtcatgttataagtgtatcacagacaccatgcag
gagctggtgaaccagagtaaagcggctcctcagtctcccagtgtccctaagcagccagga
ccccctgttatgacctctgaccccaacatgctgagtaatgaggatgccaccgcccacttt
gagcaggtcattggtctggcccagaggtcacaggatgaactcttccacatagccctctac
aactggctgatacaggctgacctcaccgacaagcttctggaggtgaactctccatacctg
gaggaacacctgatgcacatgatcaagcaggaccagagtaaggtgcggaacatggacctg
ctgtggcggtactatgagaagagccgtagctttggcaaggcagctcacgtcctggccagg
ctcgctgacatgcacagtactgagatctccctgaagcagaggctggagtacatctccagg
gccatcctgtcagccaagagttcctcctgcatctctgctcaaggagctgaaggggagttc
ctgcatgagctggaggagaagatggaggtggtgcgtattcaggtccagatccaggagact
ctgagcagacgttactcccagcatccctctgtacagggagccatgtcacaactggattcc
gagcttatggacatcaccaagctgtatggggagtttgcagatcacttccggttgtctgaa
tgcaaactggccatcatccactgtgctggtcactctgaccccatcctggtgcactctctg
tggcaggagatcatggagaaagagctgggtgacagtgtggccatgagtccagctgacagg
atgagagctctgagtctcaaactggtgtctctggggaaaatctacgcaggaacacccaga
tactttccactagaattcctggtgaagtttttggagcaggaggtgtgtcatctgaattgg
gacgtgggctttgtcaccttcaccatgcaggagataggagtacagctcccccgtctgctg
gaggtctacgaccaactcttcaagacacgggatccgtgttggcagcgtctgaagaaacct
ctccacctggtagagtgtatacatgtgctgctgtcaggatacgtagaggaccccagcaga
gtaccaacatatgaccgacggcggttcactaatgtgtgtctggataacatctgtggttac
ctggtggagctgcagtccctgagtcctaactctaccctgcggctcaccatcggcaacttc
aaggccctgcaggccaagctggagaaagttcactga
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