Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408784
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Entry
139408784 CDS
T10872
Name
(RefSeq) nipped-B-like protein B isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04110
Cell cycle
Brite
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
139408784
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139408784
NCBI-ProteinID:
XP_071009204
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Position
5:complement(38494299..38548135)
Genome browser
AA seq
2669 aa
AA seq
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MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLYNGRIAEEVNCLLACRDEN
LVSQLAHSLNQVSTEHIELKDNLGSDDPEGDVPVLLQTVLSRNPNIFREKNIMQQPIMPQ
YKMSQNSMHGSPASTNYQQSTISHSPSSRFASPQMGSGARFTPQQNSPVSSPYAPQSPAS
YMQQYPHPPSYSQHQQIQQVASPVVPASMRNIHDNKVSGQISSNSANHNARHGSNEDYMN
IVHRLGNEESDPSMRNASFPLRSPQSVSSPVGSEGTPKGSRPGLILQSPPPYAPPRDAAP
DLLLDSPDHKKKQKKLTKEEKEQLEKAAMYDIVSSPSKDSTKLTLKLSRVKSSELDQSGE
LLSGVEDQDTDLAYNSLQFSRTQQDPAHRLAPGQGEQSGYQQVPVLQNTKQAIGVISGAV
YDDAEMDALAEIERIERETLIERERCSKEVQDKDKPLKKRKQDSYPQEPGAGGTAGATQP
GVGGGNVGSKLAPQEASAASNGASRPALMVSIDLQQAGRADGQPEVNMGTPTPAVEARRW
PEERLGPEEGSDSTGVLRLKSKTDGERLQTADGRPEVIKQRADTPKKLGPDGRPETPKHK
HENRRDSSKHRHDGKPDNGKARPDSRTPDTPRQRHEGRSDSGHREERSRDSDPSRIRRPE
TPSKSSRGEHDSKHGRDRDRDRADKDRERKHRTEAGEPRDRRSPEQRSRPESPRVKQEGR
GGVDPSGRQRTDRPCPNLKPPNKEERRSGEEKRSGDGSRNRQDSKQQQQPAESKQEFPAY
LLGGVKSGGFKNFVIPKMKRDKDGHVLAAEMRKPGSGLGPVMEGWSEPRVKLERLGLVEE
MKTGAKPVVVLQKLSIDEVQKIIREREDRNARGSKSSKSRHSHEKSGKGGLDESVLKELP
PHLIAEIESTMPLCERVKMNKRKRSTVNEKPKYAEVDSDDSDDDSVTESARKRHKKEREK
TWAPDERERRGSGEHRRSSGGSQERRKGSGRRYRERSPEESDEESPPPSMSDLARKMKKE
KQKKRKSYEPKLTPEELMDSSTFKRFSASVDNILESLEDIDFNAIDDDEIPQELLLGKHQ
LSELGSESAKIKAMGITFRLPSDKLVKVLNILEKNIQDGSKLSTLMNHDADAEDEERLWR
DLIMERVTKSADACLTALNIMTSSRMPKAVYIEDVIERVLQYTKFHLQNTLYPQYDPVYR
VNPHGGGYLSSRAKRAKSSTHKQRVIIMLYNKVCDIVSNISELLEIQLLTDTTILQVSSM
GITPFFVESVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNS
SDKDGEPMYIQMVTALVLQLIQCVVHLPSNKDSHDDEYNKKVDQDVLITNSYETAMRAAQ
NFLSVFLKKCGSKQGEEDYRPLFENFVQDLLSTVNKPEWPASELLLSLLGRLLVHQFSNK
QTEMALRVASLDYLGTVAARLRKDAVTSQMDQRSIDRILKETQGNDETQQLQKALLAYMD
ENAETDPSLVFARKFYIAQWFRDTLTETEKAMKSQNQRGDEDSSEGQHHAKDIESTGEIM
QRAEARKKYLRNIIKTAPSQFSTLRMNSDTVDYDDSCLIVRYLASMRPFAQSFDIYLTQI
LRVLGESAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVELLGR
FVLSRPQLTEQYYDMLIERILDTGISVRKRVIKILRDICLEQPTFNKITEMCVKMIRRVN
DEEGIKKLVNETFQKLWFTPTPNHDKDAMTRKILNITDVVSACKDTGYDWFEQLLQNLLK
TEEDASYKPARKACVQLVDNLVEHILKYEESLADIENKGVNSNRLVSCITTLFLFSKNRA
QLMVKHAMTMQPYLTTKCNTQSDFMVICNVAKILELVIPLMEHPSETFLTTIEEDLMKLT
IKYGMTVVQHCVSCLGAVVNRVTHNYKFVWACFNRYYGALTKLKTQHSEDCNNPVLAANK
PALLRSLFTVGALCRHFDFDQEEFKGPSKVVIKDKVMELLLYFTKHEDEEVQTKAIIGLG
FQFIQYPGLMFMQDVKTLYNGILSDRKSSVNLKIQVLKNLQTYLQEEDSRMQEADQQWKK
LSKQEDLKEMGDISSGMSSSIMQLYLKQVLEAFFHTQSNVRHFALNVIALTLNQGLIHPV
QCVPYLIAMGTDPEPTMRNKADQQLVEIDKKYTGFIHMKAVAGMKMSYQVQQAIWSAKGT
VIRGYRQDETTSALCAHLFSMVRTNRQHRRAFLISLLNLFDDSSKMEVNMLLYIADNLAC
FPYQSQEEPLFIMHHIDITLSVSGSNLLQSFKESLLKEPRRREKKQKERKYHSEEDNSEE
EGRHSSRSNSSDDEVVHRPKKHKHRAQAHVESDSDSDLEMEDLDKVMQRLPDNPIPLLDF
ANASQGILLLLVLKQHLKNLYGFSDSKIQKYSPTESAKVYEKAVNRKSHVHFSPRQTLDF
LTSDLANVELTYDIKRRIVKQYLDFKLLMEHLDPDEEDEEGEASASANARNKAITSLLGG
SSHQDHKNHHQAPIETDDDESDGDEKTPGSSRRSRKHGDSAEASGHMNETVGSMDVIALC
CPKYKDRPQIARVIQKTNTGYRVHWMAGSYSGVWAEAKKRDGRKTVPWVDTIKESDIIYK
KIPLTSAHKLTNRVVQTLRSLYSAKDGTS
NT seq
8010 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccattactactcttgctgggatcgctagccttaca
gacttgttaaaccagctgcccctgccatcccctctccctgccaccaccactaagagtctg
ctgtacaatgggaggatcgcggaggaggtcaactgtctgttggcctgccgggatgagaac
ctggtgtcccagctggctcacagcctcaaccaggtttccaccgagcacatagagctgaag
gacaacttgggcagtgatgacccggagggtgacgtgcctgtgttgctgcagacagtgctc
tctaggaaccccaacatcttcagggagaaaaatataatgcagcagccaataatgccgcag
tacaagatgtcccagaattccatgcatgggagtccggcgtcgacaaactaccagcaatcc
actatctcacacagcccttctagtcgctttgcatctccacagatggggtctggcgctagg
ttcacgccccagcagaacagccctgtgtctagcccttacgccccccaaagccctgcaagt
tacatgcagcagtaccctcacccccccagctattctcagcaccaacagatccagcaagtt
gccagtcccgtggttcctgctagcatgcggaacatccacgacaacaaggtctccgggcaa
atttcaagcaactcagccaatcacaatgccagacatggctcgaacgaagactacatgaac
atagtccacagactagggaatgaggagagtgatccttccatgagaaatgcctccttcccg
ctccgatcgccccagtctgtttcttcccctgtgggcagcgaagggaccccaaaagggtca
cgacctggcctcattctgcaatcccctccaccttatgctcccccccgtgacgccgctccc
gacctactcctggactctcctgaccacaagaagaagcagaagaagctaactaaagaggag
aaagagcagttggaaaaagctgccatgtacgacattgttagctctccctcaaaagactcc
accaagctgaccctcaaactgtcccgggtgaagtcctctgagttggaccagtccggagag
ctcctatccggggtagaggaccaggacactgacctggcctacaacagcctgcagttctcc
cggacgcagcaggaccctgcccacaggttagccccgggccagggggagcagtcaggctac
cagcaggtccctgtgctccagaacaccaaacaggctataggggtgatcagcggagctgtg
tacgacgatgctgagatggacgcgctcgctgagatcgagagaatagaacgagagacgctc
atagaaagggagcgctgctccaaagaggttcaggataaagacaagccactgaagaagcgg
aagcaggactcgtatccccaagagcctggcgctggtgggacagcgggggcaactcagcct
ggcgtgggagggggcaatgttggcagcaagttggcaccccaggaggctagtgcagccagt
aatggtgccagccggccagccctaatggtcagcatcgacctgcagcaagcaggcagagct
gacgggcagccagaggtgaacatgggcacccccaccccagccgtggaggcccggcgctgg
cccgaggaacgcctgggtccagaggaaggctccgactctaccggagtcctgcggctaaag
tccaagacggatggagagcgactacagactgcagacggccggccagaggtcatcaagcag
cgcgccgacacccccaagaagctgggccccgacggccgaccggagacccctaaacacaag
cacgaaaacagaagagactcgtccaaacacagacacgacggaaaacctgacaatggcaag
gcccgacctgacagcaggacgcctgacacgccacgacaacggcacgagggccgctcagac
tctggtcacagggaagagaggtctcgggacagcgacccatcccgtatccgcaggccagag
acccccagcaagtccagcaggggggaacacgactccaaacatggacgggacagagacagg
gaccgggcggataaagacagggagaggaaacacaggacagaggcaggggaaccacgggac
cgccggtctccagagcagcgctccaggccagagagcccgcgggttaagcaggagggccga
gggggggtggaccccagtgggcgccagaggactgaccggccatgccccaacctcaaaccc
cctaataaagaggagaggaggagtggggaggagaagaggagtggggacggcagcaggaac
cgacaggactccaagcagcaacagcagcctgctgaaagcaaacaggagttccctgcctac
ttgctagggggggtaaagtctggaggctttaagaattttgtgatccccaagatgaagcgg
gataaggatgggcatgtgttggcagctgagatgaggaagcctgggtctggtctggggcct
gtaatggagggctggagcgagccccgggtcaagctggagcgactgggactggtagaggag
atgaagacaggagccaaacctgttgtggtgctgcagaaactcagcatcgacgaggtgcag
aaaatcatcagggaaagggaggacaggaacgcacgcggctccaagtcctccaagagcaga
cactcacatgagaagtctgggaaaggaggtcttgatgaatcagtgttgaaagaactccct
cctcatctcattgctgagatagagtccaccatgccactgtgtgagagagtgaagatgaac
aaacgcaagcgcagcaccgtcaacgagaagcccaagtacgctgaagtcgactccgacgac
tcagacgacgactctgtgacggagtctgcacggaagcgtcacaagaaggagcgagaaaag
acgtgggcgcctgatgagcgggagaggagaggctcaggagagcaccggaggagtagtggg
ggctcccaggagcggcgcaagggatctggcaggcgctaccgagaacgcagcccagaggaa
tcggatgaggaatccccaccacccagcatgagtgaccttgccagaaagatgaagaaggag
aaacagaagaagaggaagtcatacgagcccaagctgacaccagaagaactgatggactcc
tccacgttcaagaggttctcagccagtgtggacaacattctggagagcttggaagacatt
gacttcaacgccatcgatgatgatgagatcccacaagagcttctgctggggaaacaccag
ctgagcgaactgggcagcgaatctgctaagatcaaggccatgggcatcaccttcaggctt
ccatctgataagttggtgaaggtcctgaacatcctggagaagaacattcaggacggttcc
aagctctccacactgatgaaccatgacgcagacgcagaagacgaggagcggctgtggcgt
gacctcatcatggagcgcgtgaccaagtctgcagacgcctgtctgacggccctcaacatc
atgacgtcgtcccgcatgcccaaggcggtgtacatcgaggatgtgattgagagggtgctg
cagtacaccaagttccacctgcagaacaccctctaccctcagtatgaccctgtctacaga
gtgaaccctcatggaggtggctatctgagctccagggctaagagagctaagagctccaca
cacaagcagagggtgatcatcatgctctacaacaaggtgtgtgacatcgtcagcaacatc
tctgagctcctggagatccagctgttgacggacaccaccatcctacaggtctcctccatg
ggcatcactccattctttgtggagagtgtcagtgagctacagctgtgtgccatcaaacta
gtgaccgcggtgttctctcgctatgagaagcacaggcagctcatcctggaagagatcttc
acctctctggccagattacccaccagcaaacgcagcctcaggaacttcaggctgaacagc
agtgataaggatggggagcccatgtacatccagatggtcacagctctggtgcttcagctc
atccagtgtgtggtgcacctccccagcaacaaggacagtcacgacgatgagtacaacaag
aaggtggatcaagatgtcctgatcactaactcttatgagacggccatgagagcagctcag
aacttcctgtccgtcttcctaaagaagtgtggcagtaagcagggagaagaggactaccgg
ccgctgtttgagaactttgtccaggacctgctgtctacggtgaacaaaccagagtggcca
gcttcagagcttctcctcagtctgctgggacgtctactggtgcaccagttcagtaataag
cagacggagatggctctgagggtggcatcgcttgactacctgggcacggtcgctgcccgc
ctgcgcaaagacgcagtcaccagccagatggaccagcgctccattgaccgcatcctcaaa
gagacccaaggcaatgatgagacccagcagctacagaaagccctgctggcctacatggac
gagaacgcagagacggatccatctctagtttttgccaggaagttctacatagctcagtgg
ttcagggacactttgacagagacagaaaaggccatgaagtctcagaaccagcgaggggac
gaggactcttctgaaggccagcaccacgccaaggacatcgagagcactggcgagatcatg
cagagagctgaggcccgcaagaagtacctccgcaacatcatcaagaccgcgccctcgcag
ttcagcacactgaggatgaactctgacactgtggactatgacgactcctgcctgattgtc
agatatttggcctctatgaggccgttcgcgcagagcttcgatatttatttaacacagatc
ctgagagtgctgggggagagtgccattgctgtcagaactaaagccatgaagtgtttgtct
gaggtggtggctgtagaccccagtattctagccaggttggacatgcagcgcggggtccat
ggtcgtctgatggacaactccaccagtgttcgcgaggctgcagtggagctgctgggacgc
tttgtgctgagcagaccccaactcacagagcagtactacgacatgctgatcgagagaata
ctggacacgggtatcagtgtgaggaagagggtgatcaagatcttgagagacatctgtctg
gagcaacccaccttcaacaagatcactgagatgtgtgtcaagatgatccgcagggtcaac
gacgaggagggcatcaagaaacttgtgaatgagaccttccagaaactctggttcacccct
acacccaatcacgataaagacgccatgacccgtaagatcctcaacatcacagacgtggtg
tctgcatgcaaagatacaggctatgactggtttgagcagctgcttcaaaacctgctgaag
acggaggaagatgcttcctataaaccggccagaaaggcctgcgttcagctggtggacaat
ctagtggaacacatcctcaaatacgaagagtctctcgctgatatcgagaacaagggggtg
aactccaatcgtctggtgtcctgcatcaccaccctcttcctgttcagtaagaatcgagcc
cagctgatggtcaaacatgccatgaccatgcagccttacctcaccaccaagtgcaacacc
cagagtgacttcatggtaatctgtaacgtggccaagatcctggagctggttatccctctg
atggagcacccctctgagaccttcctcaccaccatagaggaagacctgatgaagctcacc
atcaaatacggcatgacggttgtgcaacactgtgtgagctgtcttggcgctgtcgtgaac
cgggtcactcacaactacaagtttgtttgggcttgtttcaaccgttactatggtgccctg
accaagctgaagacccagcactcagaggattgcaacaaccctgttctggctgctaacaaa
ccggccttgctgcgctcgctgttcactgtgggggcgctctgtcgccactttgactttgac
caggaggagttcaaggggcccagcaaggttgtgataaaggacaaagtgatggaacttctg
ctgtacttcaccaaacatgaagatgaggaagttcagaccaaggccatcattggtctaggc
ttccagttcatccagtacccagggctgatgttcatgcaggatgtgaagactctgtacaac
ggcatcctgtcggacaggaagagctccgtcaacctgaagatccaggtgctgaagaacctg
cagacatacctgcaggaggaggattctcgcatgcaggaggccgaccaacagtggaagaag
ctgtcgaagcaggaggacctgaaggagatgggggacatctcgtcaggcatgagcagctcc
atcatgcagctgtacctgaagcaggtgctggaggccttcttccacacacagtccaacgta
cgacactttgccctcaacgtcatcgccctgacgctcaaccagggcctcatccatcctgtg
cagtgtgtgccctacctgattgccatgggaacggacccagagcccaccatgaggaacaag
gctgaccagcagctggtggagattgataagaagtacaccggcttcatccatatgaaggcc
gtggcggggatgaagatgtcctaccaggtacagcaagctatctggtcagctaagggtacg
gtgatccgtggctaccggcaggacgagaccacctcggccctctgcgcccacctcttctct
atggtccgaaccaaccggcagcaccgacgagccttcctcatctcactgctcaacctgttt
gatgacagctcgaagatggaggtaaacatgctcctgtacatagcagacaacctggcctgt
ttcccctaccagagccaggaggagcccctgttcatcatgcaccacatagacatcaccctg
tctgtgtccggcagcaacctgctgcagtccttcaaggagtcccttctcaaagagccgagg
cggcgggagaagaagcagaaagagaggaagtaccactcggaggaggataactctgaggaa
gaggggcgtcacagcagccgctccaacagcagtgacgatgaggtggtccacaggcccaag
aagcacaaacaccgggcccaggcccacgtggagtctgactctgactctgacttggagatg
gaggacttggacaaggtgatgcagcgtctgcctgacaaccccatccccctgttggacttt
gccaacgcctcgcagggtatccttctgctgctggttctcaagcagcacctaaagaacctc
tatggcttctcagacagtaaaatccagaagtactctccgacggaatcggctaaggtgtac
gagaaggctgtgaacaggaagagtcacgtgcacttcagcccacgtcagacattggacttt
ttaacttctgacctggccaacgttgaactgacctacgacatcaagaggaggatcgtcaaa
cagtacctagatttcaagttactgatggagcacttggaccctgatgaagaggatgaggaa
ggtgaggcgtcggccagcgctaacgccagaaacaaagccatcacttcactgctgggaggg
tccagccaccaggaccacaagaaccaccaccaagctcctatagagacggacgacgacgag
agcgacggagacgagaaaaccccagggtcgtcacgaagatccaggaagcacggcgactct
gcggaggcatcaggtcacatgaacgagacggtaggttccatggacgtcatcgccctctgc
tgccccaagtacaaggaccggccacagatcgcccgcgtcatccagaagaccaacacgggc
tacagggtgcactggatggctgggtcctactctggagtctgggctgaggctaagaaacgg
gacggacgcaaaactgtgccttgggtggacactatcaaggagtcggacattatttacaag
aaaatacccttgacgagtgcacacaagctgacgaacagagtggtgcagactttacggtca
ctgtactcagccaaggacggaacttcctaa
DBGET
integrated database retrieval system
