KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408787
Entry
139408787         CDS       T10872                                 
Name
(RefSeq) unconventional myosin-Vb isoform X1
  KO
K10357  myosin V
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04814  Motor proteins
Brite
Messenger RNA biogenesis [BR:ocla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Cargo complex
     139408787
   mRNA cycle factors
    P-body specific factors
     139408787
Membrane trafficking [BR:ocla04131]
 Others
  Actin-binding proteins
   Myosins
    139408787
Mitochondrial biogenesis [BR:ocla03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Retention of mitochondria
    139408787
Cytoskeleton proteins [BR:ocla04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Myosins
     139408787
SSDB
Other DBs
NCBI-GeneID: 139408787
NCBI-ProteinID: XP_071009214
LinkDB
Position
5:38683623..38765442
AA seq 1824 aa
MSVNELYSKYTRVWIPDPEDVWRAAEIIKDYKEGEPILHLKLEDESPLEYRIGPKDNPLP
FLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLEPNHIYTYCGIVLVAINPYDQLQIYG
EEVINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRFF
ATVGGSANDTNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDRRYHIIGANMR
TYLLEKSRVVFQAEDERNYHIFYQLCASASFPEFKDLALTSAEDFIFTSQGENIFIEGVN
DAEDFKKTKEAFTLLGVKESNQSSIFRIIASILHLGNVEICSERDGDSCHISRNDPHLTH
FCRLLGVELEQMEHWLCHRKLVTTSETYVKNMSRKQAANARDALAKHIYAHMFDWIVEHV
NKSLHTSSKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNQHVFKLEQEEYMK
EQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWCQKLYDRLSSSVHFQK
PRMSNISFIIIHFADKVEYQCDGFLEKNRDTVYEEHINILKASKFQLVADLFQDTNKDGS
SSTSSSSKSSRINVRSAKPTPKVPNKEHRKTVGHQFRSSLQLLMETLNATTPHYVRCIKP
NDEKEAFSFDSRRAVQQLRACGVLETIRISAAGYPSRWTYPDFFNRYRVLMKKSDMTVGD
KKLVCRNLLETLVKDPDKFQFGKTKIFFRAGQVAYLEKLRADKFRSACIKIQKTVRRWLQ
MVRYKKIRKSAITLQRFGRGYMARRYAERLRLTRAAVICQKQYRMVRERTSYLRVRQAVV
TIQAFTRGMFTRRIFQEFLLHHKAMIIQKHVRGWLTRRKFKVARNAAITIQCAYRRMRAK
RELKQLKIEARSAQHLKKLNTGMENKIVQLQRKMDDQTKDLKTQNEQLVVAKASLGSEVN
KLQKELETMRSRQGDGSQLTSLKDELEKLRAELQEAHAHRKKLEEEHSNEKMRFEQRVEE
LERENSLLKSEKEKMNQRILHHSKSTEDQESSASQSVGRVQAELDEERQRYQNLLREFSR
LEQRYDNLQEAKFQPGHRRNNSNQSSLESDSNYPSISTSEVGDTDDAIQLVEEMGVEKAA
MDIGVFMKLQKRVRELEQERKRLQVNLEKMEDQSKRKGIEPKTTSEQENADLAYNSLKRQ
ELESENKKLKNDLNELRKAIADRASKNSSSNELQDGYNLLLGQLKAANEELDVRKEEVLI
LRSQIVTAAQQKEKDTTNHIETNNLPEWTNSKKPIDKEEALRSYHGLCESKKLLEAQLQS
QARKHEDELEAFRTQIELLRDDIEKKQEMLNHTMSLSPEAQVEYSVQQEITRLTNDNLDL
KELVEKLEKNERKLKKQLRIYMKKVQELEVSVTAAASQSTTAKPEMTRQVTVQRREKDFE
GMLEYYKEDEALLVKTLITDMKPHAVSATVPCLPAYILFMCIRHADYINDDQKVHSLLTS
TINAIKKVLKKNNDDFEMTSFWLANTSRLLHCLKQYSGDEAFMTQNTAKQNEHCLKNFDL
AEYRQVLSDLSIQIYQQLVKVAEHVMQPMIVSAMLESESIPSLAGVKPMGYRNRSSSMDK
DEEGPGSYTLEALIRQLGQFHGVMGEHGLDPEIAGQVIRQLFYSINAVTLNNLLLRKDVC
SWSTGMQLRYNISQMEEWLRGKNLHQSGAVINMEPVIQAAQLLQVKKKTSQDAEAICSLC
TALTMQQIVKILNLYTPLNEFEERVTVSFIRNIQNRLQERNDVPMLLVDTKHTFPVLFPY
TPSALSLETLHIPANLSLHFLTRV
NT seq 5475 nt   +upstreamnt  +downstreamnt
atgtccgtaaacgagttatattcaaagtacactcgggtgtggatcccagacccagaggat
gtatggagagctgcagagatcatcaaggactacaaggagggagagccaatcctgcacctc
aaacttgaagatgaatcgccgttggaataccgcatcgggcccaaagacaaccctcttccc
ttcctccggaaccctgatatcctggtgggggagaatgacctcacagcgctcagctacctt
cacgagcctgctgtcctacacaacctcaaagtgcgcttcctcgagcccaaccacatctac
acatactgtggtatcgtactggtggccatcaacccctacgaccagcttcagatctatgga
gaggaggtcatcaatgcctacagtgggcagaacatgggagacatggacccacacatcttt
gctgttgctgaggaggcatacaagcagatggccagagatgagaggaaccaatccatcata
gtaagtggggagtcgggggcagggaagaccgtctctgctaagtacgccatgcggttcttc
gccactgtgggagggtcggccaacgacaccaacgttgaggagaaggtgctggcctccagc
cccatcatggaggctattggaaatgcgaaaaccacgcgcaatgacaacagcagtcgtttt
gggaagtacatccagattggttttgacaggcgttatcacataataggtgccaacatgcgc
acgtatctgctggagaagtcgagggtggtgttccaggctgaggatgagaggaattaccac
atcttctaccagttgtgtgcctctgctagcttcccggagttcaaagacctagccttgacc
agtgcggaagacttcatcttcacatcgcaaggagagaacatcttcattgagggggtgaat
gatgccgaggacttcaagaagacgaaggaagcctttacactactgggtgttaaggagagc
aatcaaagcagcatcttcagaatcatagcttccattctgcatctggggaacgtggagatc
tgctcggagagagacggagactcctgccacatatcaaggaacgaccctcacttgacgcac
ttttgccggttgctgggggtggagctggagcagatggaacactggctatgtcacaggaag
ctggtcaccacgtcagagacctacgtcaagaacatgtcccgcaaacaggcggctaatgcc
cgcgacgcgctcgccaaacacatctacgcccacatgtttgactggatcgtggagcacgtc
aacaagtccctgcacacctcctccaaacaacactccttcatcggtgttctggacatctac
ggatttgagacctttgagataaacagctttgagcagttctgcatcaactacgccaatgag
aaactgcagcagcagttcaaccaacatgtgttcaagctggagcaggaggagtacatgaag
gagcagatcccctggacgctcatcgacttctatgacaaccagccgtgtatcgacctcatc
gaggccaagctgggcattctggacctgctggatgaggagtgcaaggtgcccaaagggaca
gatcagaactggtgccagaagctgtacgatcgcctttcaagcagtgtccatttccagaaa
ccacggatgtccaacatatctttcattatcattcactttgctgataaggttgagtaccag
tgtgatggcttcctggagaagaacagagacaccgtctatgaggaacacatcaacattctg
aaggccagcaagtttcagctcgtggcggatctgttccaggacactaataaagacggaagc
agctccacgtcttcttccagcaagtcctccaggatcaatgtgcgctcagccaaaccgaca
cctaaagtccccaacaaggaacacaggaaaaccgtgggccaccagttccgcagctccctg
cagcttctcatggagacactgaatgccaccaccccccactatgtgcgttgcatcaagcct
aatgatgagaaggaggcattctcgtttgactctaggagagctgtgcagcaactgagggca
tgtggagtcctggagaccatccgcatcagtgctgctgggtacccatcaaggtggacgtac
ccagacttcttcaacagatacagagtcctcatgaagaagtcagatatgaccgtaggagac
aagaaactggtgtgtaggaacctactagagaccctggtcaaggacccagacaagttccag
tttggtaagaccaagatcttctttcgggcgggccaagtggcctacctggagaagctgagg
gcagacaagttccgctccgcctgcatcaagatccagaagacagtgcgacgctggctacag
atggtccgctacaagaagatacgcaagtctgccatcaccttgcagagatttggccgcggt
tacatggcccgcaggtatgcggagcggctgcgtctaacccgcgctgctgttatctgtcag
aagcagtatcgtatggtccgagagcggacgtcctatctgagggtgagacaggctgttgtc
accatccaggcctttaccaggggcatgttcacccgcaggatcttccaggagttccttctg
catcacaaagccatgatcatccagaagcatgtccgaggctggctcaccaggaggaagttc
aaggtggcacggaacgccgccatcaccatccagtgtgcctaccgccgcatgcgagccaag
cgggagctgaaacagctgaagattgaggcgaggtccgctcaacatctgaagaagctcaac
acgggcatggagaacaagatcgtccaactgcagaggaagatggatgaccagaccaaagat
ctgaagactcagaatgagcaactggtggtggccaaagcctccctgggctcagaggtgaac
aagctgcagaaggagctggagaccatgcgcagtcgccagggagacggcagtcagctgacc
tctctgaaggatgagctggagaagctgagggcggagctccaggaagcacatgcccacagg
aagaagctggaggaggagcacagcaacgagaagatgagatttgaacagagagtggaggag
ctggagagggagaattccctgctgaagagtgaaaaggagaagatgaaccaaaggattctg
caccactccaagagcacagaagaccaggagagcagtgcatcccagagtgtgggtcgggtc
caggcagagctggatgaggagaggcagcgctaccagaacctgctcagggagttctccaga
ctggagcagagatatgacaacctacaggaggccaagtttcagcctggccacaggaggaac
aattctaaccagagcagcctggagtctgactccaattatccctccatttctacctcggag
gtgggagacactgacgatgccatccaactcgtagaggagatgggagtggagaaggcagca
atggacatcggtgtattcatgaagctgcagaagcgtgttagggagctggaacaggagagg
aagagactgcaagtcaacctggaaaagatggaggaccagtctaagcgcaagggcattgag
ccaaagacgacatcagagcaagagaatgcggatctggcctacaacagtctcaagagacag
gagctggaatctgagaacaagaagctgaagaatgacctgaacgagctgaggaaggccatc
gctgaccgcgcctccaagaacagctcctccaatgagcttcaggacggctacaacctgttg
ctgggccagctcaaggcagccaatgaggagctggatgtgcgtaaggaggaggtccttatc
ctcaggagtcagattgtcactgcagcccagcagaaagagaaggacacaaccaatcacatt
gaaaccaataacttgcctgaatggaccaacagcaagaagcccatagacaaggaggaggct
ctgaggtcctatcatggactctgtgagtctaagaagctgttggaggcccagctccagtct
caggccaggaagcacgaggatgagctggaggcgttccgcacccagattgagctgctaagg
gacgacatagagaagaagcaggagatgctaaaccacaccatgtctctgtcccctgaggcc
caggtggagtacagcgtccagcaggagatcacccgcctcaccaacgacaacctggactta
aaagagcttgtggagaaactggagaagaacgagaggaagctgaagaagcagctgaggatc
tacatgaagaaagtacaggagctggaagtgtccgtgactgcagcagcatcccagtccacc
acggccaaaccagagatgacccgtcaggtgactgtccagcgcagagagaaggactttgag
ggcatgctggagtactacaaagaggacgaggccctgctggtcaaaacgctcatcaccgac
atgaagccccacgctgtatcagcaacagtgccctgcctacctgcctacatcctcttcatg
tgcatccgccatgcggactacatcaacgatgaccagaaggtccactctctgctcacctcc
accatcaacgccattaagaaggtcctcaagaaaaacaatgatgactttgagatgacctcc
ttctggctggccaacacgagccgtctgctgcactgtctcaagcagtacagtggagatgag
gcgtttatgactcagaacacggccaagcagaatgagcactgtctgaagaactttgacctg
gcagagtaccgccaggtgctgagtgacctctccatccagatctaccagcagctcgtcaag
gtggcagagcatgtgatgcagcccatgatcgtgtcggccatgttggagagtgagtctatc
cccagccttgcgggagtgaagcccatgggttacaggaaccgctcctccagcatggacaag
gacgaggagggcccagggagctacaccctggaggccctgatcagacagctgggccagttc
cacggggtgatgggcgagcacggcctggacccagagatagcaggccaggtgatccggcag
ctgttctacagcatcaacgctgtcaccctcaacaacctgctgctcaggaaagacgtctgc
tcctggagcactggcatgcagctccggtacaacatcagtcagatggaggagtggcttcgg
gggaagaacctccaccagagcggggcagtgattaacatggagcccgtcatccaggccgcc
cagctgcttcaggtcaagaagaagacgtcccaggacgccgaggccatctgctcactgtgt
accgctctcaccatgcaacagattgtgaaaatcctcaacctctacaccccgctcaacgag
tttgaggaaagagtcactgtgtccttcatcagaaacatccagaatcgtctgcaggagagg
aacgatgtcccaatgctcctggtggacaccaagcacaccttccctgtcctattcccctat
accccctcagcccttagcctggagacccttcacatccctgccaacctcagcctacacttc
ctcactcgagtctga

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