Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408829
Help
Entry
139408829 CDS
T10872
Name
(RefSeq) BRCA1-associated protein-like isoform X1
KO
K10632
BRCA1-associated protein [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139408829
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139408829
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139408829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRAP2
zf-UBP
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_5
zf-C3HC4
zf-RING_11
zf-RING_UBOX
RRM_1
Crescentin
CENPH
Tropomyosin
zf-C3HC4_3
NET2A
V_ATPase_I
zf-ANAPC11
Sec10_N
ATG16
DUF1664
UPF0242
YabA
Motif
Other DBs
NCBI-GeneID:
139408829
NCBI-ProteinID:
XP_071009295
LinkDB
All DBs
Position
5:complement(40289832..40302413)
Genome browser
AA seq
605 aa
AA seq
DB search
MMIIGIVLFQKLMLCICLVSLFLPVPLSAPVAEDMSEEDLQEKALGSARLSLSGKTELER
AAVLHQHIGSRAMGDMVIETIAPNPDKGKVEQTGAEGEEGGGARPLENQPDEGDPNEGTT
EDSADGTETAPDSPSKHLPDQISFFSGNPSVEIVHGIMHLYKTNKMTSLTEDVRRSAMLC
ILTVPSTMTSHDLMKFVAPFYDVMEHMKIIRDPTPNQYMVLIKFSSQADADSFYTACNGR
TFNSIEDAVCQLVYVERAEVIKSEQGASLPVMELTELPKCTVCLERMDESVNGVLTTLCN
HSFHSLCLQRWEDASCPVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYVSRH
AYKHFEETQHTYAMQLTNHRVWDYAGDNYVHRLVASKTDGKMVQYGCEGETCHEEKIDAL
QLEYSYLLTSQLESQRIYWENKIVHLEKDTAEEINNMKAKFKETIDRCDNLERRLGELAK
DKQSMDKKCGQLSTRVTKLGHELKEEQEMNRCLRANQVQLQAQLAEEERKARETGERKDG
VIAELQEQLRDVMFYLETQQQIEGLPPETRTEIQEGSINIGAAATPAPGPSAIGRGRRGR
SKRGK
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgatgataataggtattgtattgttccagaagttgatgctttgtatttgtctagtctcc
ctctttctacctgtccccctctctgcccctgtagctgaggatatgtcagaggaggatttg
caggagaaagctctgggctcagccaggctttctctgagtgggaagacagagctggagaga
gcagcagtcctacaccagcacatcggcagcagagccatgggagacatggtcatcgagacc
atcgcacccaaccctgataaaggaaaggttgagcagactggggcagagggagaggagggt
ggaggagcccgccctctagagaatcaaccagacgagggggaccctaatgagggcactaca
gaggacagtgccgatggcacagagacggctccagactcaccctccaagcatcttccagac
cagatctccttcttcagtggaaacccctcagtggagatagtccacggcatcatgcacctc
tacaagaccaacaagatgacgtccctgacggaggacgtgcgtcgcagtgccatgctgtgt
atcctgaccgtcccctccaccatgaccagccacgacctcatgaagtttgtggcaccgttt
tatgacgtcatggagcacatgaagatcatacgagaccccacccctaaccagtacatggtg
ctgattaagttcagtagccaggctgacgcagatagtttctacacagcgtgtaatggccgt
acgttcaactccatagaggacgcagtctgccagctggtctatgtggagagagctgaggtc
atcaagtctgagcagggcgccagtcttccagtgatggagctgacagagcttcctaagtgt
accgtgtgtctggagaggatggacgagtcagtgaacggggttctcaccacactctgtaac
cacagcttccacagcctgtgtctgcaacgctgggaggacgcctcgtgtcctgtgtgtcgg
tactgccagaccccagagcctgtagaggagaacaagtgctttgaatgtggcgtacaggaa
aacctgtggatctgtctgatctgtggtcatattggctgtggtcgctacgtcagtcgtcat
gcctacaaacactttgaagagacgcaacacacgtacgccatgcagctcactaaccaccgt
gtctgggactatgctggagataactacgttcacaggctggtggccagtaagactgatggg
aagatggttcagtacgggtgtgaaggagaaacctgccatgaggagaagatagatgctctg
caattagagtattcttacctgctaacgagtcaactggagtcccagcgcatttactgggag
aataagatagttcacctggagaaggacacagcggaggagatcaacaacatgaaggccaag
tttaaggagaccatagatcgctgtgataacctggagcgtcggctgggagagctggccaag
gacaagcagagcatggacaagaagtgtggtcagctatcgacccgtgtgacaaagcttggt
catgagctgaaggaggaacaggaaatgaaccgctgtctgagagccaatcaggttcaacta
caggcccagctggccgaggaggaacgcaaggcgagagagacgggcgagcgtaaggacggg
gtgatagccgagctccaggagcagctgagagatgtcatgttttacctggagactcagcag
cagatagaaggtcttcctccagagaccaggactgagattcaggaaggaagcatcaacatc
ggcgcagcagccactcccgccccaggaccctccgccataggcagaggccgcagggggcgg
tccaaaagggggaagtag
DBGET
integrated database retrieval system
