Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408830
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Entry
139408830 CDS
T10872
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1B-like isoform X1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04137
Mitophagy - animal
ocla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139408830
04137 Mitophagy - animal
139408830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139408830
03029 Mitochondrial biogenesis [BR:
ocla03029
]
139408830
Membrane trafficking [BR:
ocla04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
139408830
Mitochondrial biogenesis [BR:
ocla03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
139408830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
EIF3I
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
139408830
NCBI-ProteinID:
XP_071009301
LinkDB
All DBs
Position
1:complement(52813986..52853028)
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AA seq
1478 aa
AA seq
DB search
MASRHQRNSVRILSTRERGSQAFGSQRLLQQMVEEKVRWMKWQSQKVELPDSPRSTFLLA
FSPDRTLMASTHVNHNIYITEVKTGKCLHSLVGHRRTPWCVTFHPTIPGLVASGCLDGEV
RIWDLHGGSESWFTESNVAIASLTFHPTAQLLLIATNNELHFWDWSRPEPFAVVKTGSET
ERVRLVRFDPLGHNLLTAIVNPSNQQNDDESEVPMDSVEMPHFRQRSFLPSQPVRRTPIL
HNFLHILSSRSSGAQAGGDASRPGGEGSGEPPSMPLGQYPASQDRGLPYPGCTQHLGMVC
LCSRCMANRSPSLGEGPSTSRPVVHPELPQVASQPAPHASTFSARTEPRQPSEHTGAQQR
PSAFTTVYYSAGSSLHRAVPTTHVASQPLSQQLLAPPANHQHQPSSRPLPGPDWTRSLLN
MRSSESGAGSGGSSGGGMGGVGGGMLPPRTSSSSVSLLSVLRQQDGSSQSPVYTSATEGR
GFPPQPGAELGPSPVANQRGGSGGGGGVGSSSGHHPFWDGTRSNPASFRNVLQCNLSRYF
MEFDRMQDLELPLGAASMDVGGGEGGQEQMQELLNNNIDPERPGPSVSSHYQPQPPPPVP
TENNPPPFSSAAHSSRGHLNRCRACHNLLTFNHDSQRWERTSPASSTSAVSTQEGPSSPW
RQPPSPAYEEPHASSQSRDPHPHPQERERRVAQPPEPSELQPSPGPHVAAMPFPTIASSS
AQPGEQTVGLVFNQETGQWERVYRQAASSRSTDAPSEALSQEMPVDNPDEDSLRRRLLES
SLLSLSRYDMGGSRDHPIYPDPARLSPAAYYAQRMIQYLSRRDSIRQRSLRYQQNRLRTL
SSSSDSPAGNPSATIENSDVEFEELDDNGDRTRHRTPRNARMSAPSLGRFVPRRFLLPEY
LPYAGIFHERGQPGLATHSSVNRVLAGASIGDGQSAVASNIANTTYRLQWWDFTKFDLPE
ISNASVNVLVPNCKIYNDASCDISADGLLLAVFIPSSQRGFPDEGILAVYSLAPHNLGEM
LYTKRFGPNAISVSLSPMGCYVMVGLASRRILLHPSTDHMVAQVFRLQQPHGGETSIRMV
FNVVYPMAPDQRRHVSINSARWLPDPGMGLAYGTNKGDLVICRPVLYRSDGESPAEASTE
PIFTVNNSGGGTSRTRGTDRPGAPSRSSWRLDRDMGLMNAIGLQPRHPAPSVTSQGTQTP
IVQLQNAETQTEMDLSGPSTSHAAAYVEARQEVPSTSRETQGGLEQPQTSQAEASAMGDS
STEAGTSTANTGEAPEYAPGEDALARIRRLIAEGGMTAVVQREQSTTMASMGGFGNNIIV
SHRIHRGSQTRTGAAACRPSNSDPNLPVPGHSTASISTSSACPLTITQPQPSQTLLLSLE
NLSAPTEPGPVWGLPFVSQPQPLSNASGAGAGLSVAMDIDNVFEVASRMDNSEPGPSSSL
IFSSSSSSRRSYPPSSGTNGNDNNSSSRDSYPGDPYSR
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcgtcatcaaaggaactctgtacggatcctgtccacccgggagcgcggctcg
caggcctttggctcccagcgcctcctgcagcagatggtggaggagaaggtccgctggatg
aaatggcagagtcagaaagtagagctgccagatagccctcgctccacgttcctgttggcc
ttcagcccagaccggaccctcatggcttccactcacgtcaaccacaacatctacatcacg
gaggtgaagactggaaagtgcctgcattcgctcgtgggccaccgccgcacaccctggtgt
gtgacctttcaccccaccatccccggcctggtggcctccgggtgccttgacggagaggtc
cgcatctgggacctgcatggcggcagtgagagctggttcacagagagcaacgttgccatt
gcctcgcttaccttccaccccaccgcccagctcctccttatcgccaccaacaatgagcta
cacttctgggactggagtcggcccgagcccttcgccgtggtcaaaaccggcagtgagact
gaaagagtcaggttggtgaggtttgatcctttggggcacaatcttctgacggctattgtg
aacccctccaaccagcagaatgatgatgagtccgaggtccccatggacagtgtggagatg
ccccacttccgccagcgctccttcctgccctcccagcctgtacgccgcacgccaattctc
cacaacttcctgcacatcctgtcatcacgctcgtcgggggcgcaggctgggggggatgct
tcccgccctggcggggagggcagcggtgagcctcccagcatgcctttgggccagtaccca
gcctcgcaggaccgtggactgccctacccaggttgcacccagcacctgggcatggtgtgc
ctctgcagccgctgcatggccaaccgcagcccctctctgggggagggcccctccacctcc
aggcctgttgtccaccccgagcttccccaggtggcctctcagccagccccccacgcttcc
accttttcggcccgtacggagccccggcagccttcagagcacactggagcccagcagcgg
ccctcggccttcactacagtctactacagtgccggcagctccctgcaccgcgccgtgcct
accacccacgtggccagccagcccctgagccagcagctgttggccccgcccgccaaccac
caacaccaaccctcatcccgccctctgcccggacctgactggacacgcagcctgctaaac
atgagaagctcagagagtggggccggaagtggagggagcagtggagggggtatgggtggt
gttgggggtgggatgctgcccccccggaccagctcatcttctgtcagcctgctgtcagtg
ctgcggcagcaagacggctcctcccagtcccccgtctacacctctgccaccgagggacga
ggcttccccccgcagccgggcgccgaacttggccccagccctgtggccaatcagagagga
ggaagtggtggtggaggaggggtgggctccagcagtgggcaccaccctttctgggatggc
acgcgcagcaacccggcctcgttccgcaatgtgctccagtgcaatcttagccgctacttc
atggagttcgatcgcatgcaggacctggagttgccgctgggggccgccagcatggatgtc
gggggaggggagggcggccaggagcagatgcaggagctgctcaacaacaacatagaccca
gagagacctgggccctccgtgtcctcccactaccagccccagccacccccacctgtccct
accgagaacaacccccctcccttctctagcgccgcccactcctcccggggccacctgaac
cgctgccgggcctgccacaacctgctcaccttcaaccacgactcccaacgctgggagcgc
accagcccagcgtcctccacctccgctgtctccacgcaggagggccccagctctccctgg
cggcagccccccagccctgcctatgaggagccccatgcatcgtcacagagccgggatcca
cacccccatccccaagagagggagaggagggtagcccaaccccctgagcccagcgagcta
cagccctccccaggccctcacgttgcggccatgcccttccccaccattgcgtcgtcctct
gcccagcccggggagcagacagtgggcctggtgttcaaccaggagacaggccagtgggag
cgcgtctatcgccaggccgcctccagccgctccaccgacgcaccgtcagaggccttaagc
caggaaatgcctgtggataacccggatgaggactctctgagaagaaggctgttggagtcc
tccctcctctctctctcccgctacgacatgggaggatcccgagaccaccctatctaccca
gaccccgccaggttgtccccggctgcgtactatgcccagaggatgattcagtacctgtca
aggcgggatagtattcgccagcgctcgctgcgctaccagcagaaccggctgaggacactc
tcctcctcgtcggacagccctgccggcaacccctcggccaccattgagaacagcgacgtg
gagtttgaggagctagatgataacggcgacaggacgaggcacagaacaccgcgcaacgcc
aggatgtctgctccttcgctggggcgcttcgttccccggcggttcctgttgcctgagtat
ctgccctacgctgggatcttccacgagaggggacagcctggccttgccactcactcctct
gtcaacagggtcttagcaggtgcctccatcggggacggccagtcggcggtggctagtaac
atagccaacaccacctaccggctgcagtggtgggacttcaccaaattcgacctgcctgag
atcagcaacgcctctgtgaatgtgctggtgccaaactgtaagatatacaacgacgccagt
tgtgacatctcagcggacgggctgctcctggccgtgttcatacctagcagccagcggggc
ttccctgacgagggcatcctggctgtgtactccctggcccctcacaacctgggggagatg
ctctacaccaagagatttggtcccaatgccatctcggtgagcctgtctcccatgggctgc
tacgtgatggtgggcctagcatctcgcaggatcctgctacatccctcgactgaccacatg
gtggcgcaagtgttccggctgcagcagccccacggcggcgagacctccatcaggatggtg
tttaatgtggtgtaccccatggctccggaccagcggcgacacgtcagcatcaattcagcc
agatggcttccagacccggggatgggcctggcctacgggaccaacaaaggagacctggtc
atctgcaggcccgtgttgtaccggagtgacggagagagcccggccgaagcgagcaccgag
cccatattcacagtcaacaacagcggtggtggaaccagcaggacccgcggtacagatcga
ccaggggcccccagtcgctccagctggagacttgacagagacatgggtctgatgaacgcc
attggcctccagccccgacaccccgccccctcagtgacctcacagggcactcagacgccc
atcgtgcagctgcagaacgctgagacgcagacagagatggacctctccgggcccagcacc
tcccacgctgctgcttatgtagaagcccgtcaagaggtcccgtccacaagccgtgagacc
cagggaggtctggagcagccacaaaccagccaggccgaggccagtgccatgggggactct
tcaacagaagccggcacctccacagccaacaccggcgaggccccagagtatgccccggga
gaggacgccctggcgcggatccgccggctcatcgcagagggcggcatgacggcggtggtc
cagcgggagcagagcaccaccatggcctccatgggcggcttcggcaacaacattatcgtc
agccatcgcatccaccgcggttcccaaacccggaccggcgccgcagcctgtcggcccagc
aacagtgaccccaacctgcctgtccccggccactctacagcctccatttccacctcctcc
gcctgccccctcactatcacccagccacagccttcccagaccttgcttctcagcctggag
aacttgtccgctcccacagaaccaggcccggtgtgggggctgccctttgtctcccaacca
caacccctcagcaatgcttcaggtgcgggggccgggctctcagtggccatggacatcgac
aacgtgtttgaagtagccagccgaatggacaattctgagccaggcccctcttcctccctg
atcttctcctcttcctcctcctctcgcaggtcctaccctcccagcagtggcacaaacggc
aacgataacaacagcagcagcagagatagttacccaggtgacccttacagcaggtag
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