Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408850
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Entry
139408850 CDS
T10872
Name
(RefSeq) zinc finger SWIM domain-containing protein 6
KO
K25704
zinc finger SWIM domain-containing protein 6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139408850
Cilium and associated proteins [BR:
ocla03037
]
Other cilia and associated proteins
Stereociliary proteins
139408850
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
ZSWIM_N
TPR_ZSWIM8
Motif
Other DBs
NCBI-GeneID:
139408850
NCBI-ProteinID:
XP_071009336
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All DBs
Position
5:complement(41052367..41094810)
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AA seq
1134 aa
AA seq
DB search
MAERVQQPPAKRLCCRPGYNTNCRQGQRAGGTLCGGSGAAQGGSSKTLSPESLLDISARK
VAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEREICMYSSFNTGGEDSGTSGENSDET
RLPFRRGIALLESGCVDNVLQVGFHLSGTVTEPAIASEPELVCSVSVSFDRCKITAVTCG
CGNKDIFYCAHVVALALYRVRKPEQVKLHLPISETLFQMNRDQLQKFVQYLITVHHTEVL
PTAQKLADEILSTNSEINQVHGAPDPTAGASVDDENCWHLDEEQVQEQVKLFLSQGGYHG
SGKQLNLLFSKVREMLKMRDSNGARMLTLITEQFMGDPRLALWRQQGTTMTDKYRQLWDE
LGALWMCIVLNPHCKSEQKCVWLRQLRRWNGVDVCPWEDGNHGNELPNLTHALPHGNPDS
SSRPHRTVFTRAIEACDLHWQDTHLQRIITHDLYTHSHAHCHHDNHGSAGALFDARGWPL
WHEHIPTACARVDALRSHGYPREALLLAIAIVNTLIRQQQKHLELFRSHKKELLHKGMTS
VTNMEGWVGHPLDPIGTLFSTLLDTGRGDEEGRNAFLDFSGSVSSAKRSEPHLFPAQRLL
DDGQSFVALAVETALIGLGQQRVMPDGLYAQEKVCRNEEQLLAKLQEVELDDALVKIFRK
QAIFLLEAGPYSGLGELLYRESVPMHTFAKYLFTSLLPHDTELAYKIALRAMRLPVLESM
APSGDLSRPHHIVSMVPNRYPRWFTLSHIESQQCELASTMLTAAKGDGRKLETVLESIQK
NIHSSSHIFKLAQDAFKIATLMDSLPDITLLKVSLELGLQVMRMTLSTLNWRRREMVRWL
VTCATEVGVYALDSIMQSWFTLFTPTEATSIVATTVMSNTTIVRLHLDCHQQENLASSAR
TLALQCTMKDPQNCALSALTLCEKDHIAFETAYQIVLDAAVTGMSYTQLFTIARYMEHRG
YPMRAYKLATLAMAHLNLSYNQDTHPAINDVLWACALSHSLGKNELTAVIPLVVKSVKCA
TVLSDILRRCTLTTPGMVALHSRRNSGKLMSLDKAPLRQLLDATIGAYINTTHSRLTHIS
PRHYSEFIEFLSKARETFLMAQDGHIQFTQFIDNLKQIYKGKKKLMMLVRERFG
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgcgttcagcagcccccagccaaacggctctgctgtagaccgggttataat
acgaattgtagacagggacaacgggccgggggtacgttatgtggcggttcgggtgcggcc
caaggtgggtcgagcaaaaccctgagtccggagtctctattggatatctcggcccggaaa
gtggccgagaagtggccgtttcaacgggtagaggagcgttttgaacggatcccggagcct
gtacagagaaggatcgtttactggtcgttccccaggagtgaacgggagatctgcatgtat
tcttcgttcaatacggggggagaggacagtggaactagcggggaaaatagtgatgagacg
cggctgcctttcagacgaggtatcgctctgttggagagcggctgtgtggacaacgtattg
caagtcgggttccacctcagtggaacggtaacagaaccggccatagcgtcggaacccgag
ctcgtctgcagtgtgagcgtcagcttcgaccgctgcaagatcaccgcggtaacgtgcggc
tgcggcaacaaggacatcttctactgcgcccacgttgtagcgctggccctgtaccgtgta
cggaagcccgagcaggtcaaactacacctgcccatctcagagactctgttccagatgaat
agagaccagctgcagaagtttgtccagtacctgataacagtacaccacaccgaggtgttg
cccacggctcagaaactagctgatgagattctgtctaccaactctgagatcaaccaggtc
cacggggccccggaccccacggcaggggccagtgtagatgatgagaactgttggcacctg
gatgaggagcaggttcaggagcaggtgaaactcttcctctcacagggaggttaccacggc
tctgggaaacaactcaaccttctcttcagcaaggtgagagagatgttgaagatgcgtgac
tccaatggtgccagaatgttaacgctgatcacagaacagtttatgggcgaccctcgcctg
gctctgtggagacaacagggaaccaccatgactgacaaatacagacagctgtgggatgag
ctaggtgccctgtggatgtgtattgtgctcaacccccactgtaagtcggagcagaagtgt
gtgtggctgagacagctgagacggtggaacggtgttgacgtgtgtccctgggaggacgga
aaccacggcaacgaactgcccaacctcacacacgcactgccgcacggcaacccagactcg
tcgtctcgtcctcacaggacagtgtttacgagggccatcgaggcctgcgacctgcactgg
caggacacgcacctgcagcgcatcatcacacatgacctctacacgcactcacacgcacac
tgtcaccacgacaaccatggcagtgcaggggcactgttcgacgcccgtggctggcccctc
tggcacgagcacatccctacagcgtgtgcgagggtggatgcgctgcggtcacatggttat
cccagggaggccttgctgttggccatcgctatcgtcaacactctcatacggcagcaacag
aaacatcttgagctcttccgcagccacaaaaaagagctgctccataaaggcatgacatct
gtcaccaacatggagggctgggtgggacaccccctggaccctataggcactctgttcagc
accttactggacacgggacggggagacgaggaggggcgcaacgccttcctagacttctca
ggctctgtgagttcagccaaaaggtcggagccccacctcttcccagcacaacgcttactg
gacgatggccaatcgttcgtagcactagccgtagagacggctctgatcggcttagggcaa
cagagggtgatgcccgacggcctatatgcccaggagaaggtgtgtcgcaacgaagagcag
ctattggccaagctccaggaagtggaactggacgacgcactggtcaagatcttccgcaag
caagcaatcttcctgctagaggctggtccatacagtggtctaggagagttgctctacaga
gagagtgttcccatgcatacctttgccaagtatctcttcacctccctactacctcacgac
acagaactggcgtacaaaattgcactgagagccatgaggttaccggtcctggaatccatg
gctccatcaggtgatctgtccagacctcaccatatagtgtcaatggtccctaatcgctac
cctcgctggttcactctgtctcacatagagtcacaacaatgtgaactggcctccaccatg
ctcaccgcagccaaaggcgacgggcgtaagttagaaacggtgttagagtccatccagaag
aacatccactcctcgtctcacatcttcaaactggctcaggacgccttcaagatcgctact
ctgatggacagtctaccggacatcacactgctcaaggtctcactggagctgggtcttcag
gtgatgagaatgactctgtccacgttgaactggaggaggagagagatggtacggtggctt
gtcacctgtgccacagaagttggcgtgtatgcgttggatagcatcatgcagagttggttc
accctgttcaccccgaccgaggccacaagcatcgttgccaccaccgtcatgtccaacacc
accatcgtccgcctgcacctggactgtcaccagcaggagaacctggcctcctccgcccgg
accctggccctgcagtgtaccatgaaggacccccagaactgtgccctctccgccctcacg
ctctgcgagaaggaccacatcgccttcgagacggcctaccagatcgtcctggacgcggcc
gtcacagggatgagctacacacagctgttcacgatagccaggtacatggagcacagagga
tatcccatgagggcttacaagctggccacgctagccatggcccaccttaacctcagctac
aaccaggacacccacccggctatcaacgacgtgctgtgggcctgcgctctgagccactct
ctggggaagaacgagctgactgccgtcatccccctggtggtgaagagcgtgaagtgcgcc
actgtactgtcagacattttgagacggtgcacgttgaccacgccgggcatggtggcgctg
cacagccgcaggaactctgggaagctgatgtcgctggacaaggcgccgctcaggcagctt
ctggacgccactatcggggcctacatcaacaccacgcactctcgcctcacgcacatcagc
ccacgccactacagcgagttcatagagttcctcagtaaggccagagagacgttcctcatg
gcccaggacggacacatccagtttacccagttcatagacaaccttaaacagatctacaag
ggcaagaagaaactcatgatgctcgtacgggagaggttcggttga
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integrated database retrieval system
