Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408857
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Entry
139408857 CDS
T10872
Name
(RefSeq) protein lin-54 homolog
KO
K21776
protein lin-54
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
139408857
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Gene cluster
GFIT
Motif
Pfam:
TCR
MSL2-CXC
Motif
Other DBs
NCBI-GeneID:
139408857
NCBI-ProteinID:
XP_071009356
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Position
5:complement(41262133..41274736)
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AA seq
787 aa
AA seq
DB search
MDVVSPELNILLPDEIMDTEAIVMDDDPPAESPAASGQSQPSADAPIPMETDVLAVPEIV
SLCSDAPPTQRTQALTTSITTDSTLCSTTSATQLLLTPSIASSSPLTLRPATASTLTSTT
PKTTTSLGGVSLTTGGLQKLSANHQIILNKVASSPGADTTRSPGTTTITPGGQKFMVTAI
GKSGQSIVLQLPHTGSKPGSGQGEAKANPQHFKVLTIGGRTDLKPVMVGQAVSSASQMST
LQAQQLKTVQIAKKTQVSSAGPIKFIITKAVNNKGLTAQTSVSNVITGRVLSTSSPVTPP
RTITLSETLSSNSKIAISPLKSPSKLTMVSVASQVPNSPQKSVSLPLNMAHLGQQILVQQ
STATSPAKPMKPVQTVTVGGPQFKTIFPLSTSSNVQQIQVPGSRFHYVRLVTATTGSSTG
QAGSHCTNSSMTAKPMVVNTAQVRMSVPIIPAQTMKQVVPKPLTSSGQVLTTQTQQRLIM
PATPLPQIQPNLTNLPPGTMLAPGSGNMGYTVLPAHYVTQLQQSAYVTLASSSGFPTSTG
IQTQARLPLNGLSTSDAASRPRKPCNCNKSQCLKLYCDCFANGEFCQSCNCTNCFNNLEH
ETERAKAIKACLDRNPEAFKPKIGKGKEGESDRRHSKGCNCKRSGCLKNYCECYEAKIMC
SSTCKCVGCKNFEESPERKTLMHLADAAEVRVQQQTAAKTKLSSQISDLFTRTTPAITSG
GGRMPFTFVTKEVAEATCECLLEQAEQAELIQQPQATAERMILEEFGRCLMRIISSAGKT
DCPSINC
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggtgtcgccagagctgaacatcctcctccctgacgagataatggacaccgag
gccatcgtcatggatgacgacccacccgccgagtcccctgcggcgtctggccaatcacag
cccagcgccgatgcaccaatccccatggaaacagatgttctcgccgtcccagagatcgtt
agcctgtgttcggatgccccgccgacccagcggactcaggccctgaccacctccatcacc
acagactccaccctctgtagcaccacctccgccactcagctcctcctcaccccatccata
gcttcatcctccccccttaccctccgacccgccacagcctccaccctcacctccaccacc
cccaaaaccactaccagcctgggtggggtcagtctcaccacggggggcttacagaagctc
tcagccaaccaccagatcatcctcaataaggtggcctcatccccgggagcagacaccacc
aggtccccaggcaccaccactatcactccagggggccagaagttcatggtgacggccata
ggcaagtcaggccagtctattgtgctgcagctgccccacacgggctccaagcctggctca
gggcagggggaggccaaggccaacccgcagcatttcaaggtgctgacgataggggggagg
acagacctgaagccggtcatggtggggcaggcggtcagctcggccagtcagatgtccacc
ctgcaggcccagcagctgaagactgttcagattgcaaagaaaacgcaggtgtcgtcagct
ggaccaatcaagttcatcatcactaaagctgtcaacaacaaaggtctgaccgcccagaca
tcagtatccaatgtcattacaggtcgagtcctgtccacgagcagcccagtgacccccccg
cggaccatcactctctctgagaccctcagctccaacagcaagattgccatctcccccctc
aagtcacctagcaaattgacgatggtgtcggtggcctcccaggtacccaactcccctcag
aagtcagtgtctctgccgctcaacatggcccacctgggacagcagatactagtacaacag
tctacagccacctctccagccaagcccatgaagccggtgcagactgtgacggtgggcggc
ccccagtttaagaccatcttccccctgtccacctcgtccaacgtgcagcagatccaggtg
cccggcagccgcttccactacgtcaggctggtcactgccaccacgggcagcagcacggga
caggccggcagccactgcaccaactcatccatgaccgccaagcccatggtggtcaacaca
gcccaagtcaggatgtctgtccccatcatcccagcacagaccatgaagcaggtggtgccc
aagcccctgacgtcgtcgggccaggtgctgacaactcagacccagcagaggttgatcatg
cccgccactccgcttccccagatccagcccaacctcaccaacctacccccgggcaccatg
ctggcgcctgggtctgggaacatgggctatactgtgctgcccgcacattatgtcacgcag
ctccaacagtctgcgtatgtgactttggccagcagctctgggttccccacctctacaggc
atccagactcaggccagactgcctctcaatggcttatcaacatcagacgctgcctccaga
ccacggaagccctgcaactgcaacaagtctcagtgtctcaaactgtactgtgactgcttt
gccaacggggagttctgtcagagctgtaactgtaccaactgcttcaacaacctggaacac
gagaccgagcgagctaaagccatcaaggcgtgtctggaccgtaacccggaggcattcaag
ccgaagatcggtaaaggtaaagagggcgagtcggaccgcagacacagcaaaggctgcaac
tgtaaacgctcgggatgtctgaagaactactgcgagtgttacgaggccaagatcatgtgc
tcgtctacctgtaagtgtgttggctgtaagaactttgaggagagccctgagaggaagact
ctgatgcacctggccgacgcagctgaggtgagagttcaacagcagacggcagccaagacc
aagctgtcgtcgcagatctcggacctgttcacaaggaccaccccggccatcaccagcgga
ggggggaggatgccctttacatttgtgacgaaggaggtggcagaggccacgtgtgagtgt
ctgctggagcaggctgagcaggcagagctgatccagcagccccaggccaccgcagagagg
atgatcctggaggagtttggacgctgcctcatgaggatcatcagctcagcgggcaagacg
gactgtccctccatcaactgctag
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