Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408915
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Entry
139408915 CDS
T10872
Name
(RefSeq) RNA 3'-terminal phosphate cyclase-like protein
KO
K11108
RNA 3'-terminal phosphate cyclase-like protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
139408915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ocla03009
]
139408915
Ribosome biogenesis [BR:
ocla03009
]
Eukaryotic type
90S particles
Other 90S particles
139408915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RTC
RTC_insert
Motif
Other DBs
NCBI-GeneID:
139408915
NCBI-ProteinID:
XP_071009472
LinkDB
All DBs
Position
5:45680414..45697388
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AA seq
372 aa
AA seq
DB search
MASQGLTYDGCNFFRQRLVLSTLSGKRVKIRNIRYKDDNPGLRDFEASFIRLLDKVTNGT
RIEINQTGTVLFYQPGLLYGGVVEHECNTQRSVGYYLEALLMLAPFMKNPLKAVLKGVTN
DPADPSVDQLKYTSIPVMKRFGIDGEGLELKVVKRGMAPGGGGEVLFTCPVRKTLRPVQL
SEPGKIKRIRGIAYSVRVSPQMANRIVDSARSILNKFIPDIYIYTDHMKGDKSGKSPGFG
LTLVAETLNGTFLSAEQVSTPQGQGDPVLPEDLGRNCAKLLLEEIYRGGCIDSANQSLAL
VYMTLGQQDVSKVLLGHLSPYTIEFLRHMRDFFQTMFKIETQKPSEDERKGGDKVLMTCV
GAGYTNISKSIK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcaagccagggactcacttacgatggttgtaattttttcagacaacgactagtgttg
tcaactctaagtggcaaaagagtcaaaatcagaaacatacgatataaagacgataaccca
ggacttagagattttgaagccagcttcatccggcttctggacaaggtaaccaatgggacc
agaatagaaatcaaccaaacaggtacggtgctgttctaccagccgggcctgctctatggt
ggtgtggtggaacatgagtgtaacacccagcggtctgtgggttactacctggaagctcta
ctcatgctggctcccttcatgaagaaccctttgaaggctgtgctgaagggggtcaccaat
gaccctgctgacccctcggttgaccaactcaagtatacatccattcctgtgatgaagagg
tttgggattgatggagaggggctggaactgaaggtagtgaaaagggggatggctccaggt
gggggaggcgaggtactgtttacgtgtcccgttcgcaagactctccgtcccgtccaactg
tcagagcctggcaagatcaagcggatcagaggaatagcatactctgttagagtctctcca
cagatggccaacagaatagtggactctgccagaagcatactgaataaattcattcctgat
atctacatctacacagaccacatgaagggggacaagtctggaaagtctccaggctttggc
ctgaccttggtggctgagaccctgaacgggacgttccttagcgcagagcaggtgtccacc
ccccaggggcagggagaccctgtgctgcctgaggacctgggaagaaactgtgccaagcta
ctgctggaggagatctacaggggcggctgcatcgactcagccaatcaaagcctggctctc
gtgtacatgaccttgggtcaacaagatgtatctaaagtgctgctcggccacctctctcca
tacacgattgagttcctcagacacatgagagacttcttccagacgatgttcaagatcgag
actcaaaaaccatcggaggacgagaggaaaggaggagacaaagtactgatgacctgtgtt
ggagccggctataccaacatcagcaaatcaatcaaataa
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