Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408929
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Entry
139408929 CDS
T10872
Name
(RefSeq) UV excision repair protein RAD23 homolog B-like
KO
K10839
UV excision repair protein RAD23
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03420
Nucleotide excision repair
ocla04141
Protein processing in endoplasmic reticulum
Brite
Proteasome [BR:
ocla03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
139408929
DNA repair and recombination proteins [BR:
ocla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
139408929
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NCBI-GeneID:
139408929
NCBI-ProteinID:
XP_071009498
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Position
5:46413544..46435297
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AA seq
389 aa
AA seq
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MQITLKTLQQQTFKIDIDAEETVKTLKEKIENEKGKDGFPVAGQKLIYAGKILNDDTALK
EYKIDEKNFVVVMVAKPKAAPAAAQPSSATTTTTSSTTVPTVPAAALSGSDNPPEGGKPE
DKPAEERPSNTSAPASTPTSSSGLLANVNMFEEATSALVTGQSYENMVTEMMLMGYEREQ
VVASLRASFNNPDRAVEYLLTGIPAGEEGHVSADPVVPPVGGGTPALNTGSMTTPASTGS
LASAATGANPLGFLVNQPQFLQMRQIIQQNPSLLPALLQQIGRENPQLLQQISSHQEQFI
QMLNEPAQEGGQGGGGVGGGGGGGVGVGVGGEAGSGMNYIQVTPQEKEAIERLKALGFPE
GLVIQAYFACEKNENLAANFLLQQNFDDD
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcagataacattaaaaactctccaacagcagacatttaaaatcgacatagacgcagag
gagacggtaaaaaccttaaaggaaaaaattgagaatgagaagggaaaagatggttttcca
gttgctggacaaaagttgatatatgcagggaaaatcctaaatgatgacacagccctcaag
gagtataagattgatgagaagaactttgtggtcgtcatggtggcaaagcctaaagcagcc
ccagcagctgcccagccttccagtgctaccacgaccaccacctccagcactacagtcccc
acagtacccgctgctgccttgtcaggctcagataacccacccgaggggggcaaaccagag
gacaaaccagctgaggagaggccctccaacacctcagccccagcatcaactccaaccagt
tcgtctggtctcttggccaatgtgaacatgttcgaggaggcaacttctgctctagtgaca
ggccaatcatatgagaacatggtgaccgagatgatgctgatgggctatgagagggagcag
gtggtggcatcactccgagccagcttcaacaacccagacagagctgtggagtacctgctt
acagggatcccagctggggaggagggccatgtgagtgctgacccagtggtgccccctgtg
ggtggaggaactccagctctgaacacaggcagtatgaccaccccagccagcacaggctcc
ctagccagcgctgcaacaggagccaaccctctggggttcctggttaaccagccccagttt
ctccagatgagacagatcatccagcagaacccctctctgctccctgccttactacagcag
atagggagggagaacccccagcttctgcaacaaatcagcagccaccaagagcagttcatc
cagatgctgaacgagccagcccaggaggggggtcagggaggaggaggagtaggtggtggt
ggaggaggaggtgttggagtgggggtcggtggggaggctggaagtggcatgaactatatt
caggtcacaccccaggagaaggaggccattgagaggctaaaagccctaggattccctgaa
ggacttgttatacaggcctactttgcctgtgagaagaatgagaacttggccgctaacttc
ctcttacaacagaattttgacgatgactaa
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