Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408962
Help
Entry
139408962 CDS
T10872
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein-like isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139408962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139408962
Membrane trafficking [BR:
ocla04131
]
Autophagy
Other autophagy associated proteins
Others
139408962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
CMD
Motif
Other DBs
NCBI-GeneID:
139408962
NCBI-ProteinID:
XP_071009593
LinkDB
All DBs
Position
5:complement(50559014..50580618)
Genome browser
AA seq
987 aa
AA seq
DB search
MEITAEAEAEERRREHWKLLSSLKTTVEGLVSTNNPNVWSRYGGLQRLHKDMSHILSHGL
KHEQVYYKQKDYWPFVCCVRYISPHLASHVEQFSKLEPVLNRGVQSVGEGYKAERWLLHS
LQVHLLSAQLRPLLKHQEHTRKYYNEDAFLLKEPHVTAMFQYLEAVEQNNPRLLALVDTV
KLSTLKGPPCVGGRLKSQSLCELPGAGGGWRAGLGKSQGPPREELNCRLTTSQCSLSHRD
RGHTLNSINTGVISERNSASAPGAPWGCVSGSGGEGERGVTPPRPSAAVPHIALTEPASP
GPAHSDTLDSGEGDDGPEYLAIGNLVQRCNRRDSQSSTPISEPSRKPGGGGASGGEVQVQ
PPRRSSLTVVPPPAPRRSSFSEGQRGQGRGGSRGHIRSMSDMGINHKHRHGGGHRKITII
IEDPVAESLVGVDCCVKAYSPFSPVISDVSTPSSLYMESNGSQYSSVPDGMFRKPSEGQS
LISYLSEQDFGSCADLEKENAHFSISESLIAAIELMKCNLRRREEEEDGDDSDSEIQQLK
QKIRLRRLQIRRTCLPPSQHLFHSTDSGGSCRSSQDSFHMSDSGSAEEVEECELRDGCEG
QSLMAVSRSGLSLSLASLFSDADIKRSVTSSGRSFLTSESISPSFLQSNSAESVAMGLLR
QFEGMQLPAASELDWLVPEQDAPQKLLPIPDSLPISPDDGEHADIYKLRIRVRGNLEWAP
PRPQIIFNIHPTPKRKIVVAKQNYRCAGCGTRIDPDYIKRMRYCEYLGRYFCQCCHENAQ
AVVPGHVLRKWDFSKYYISNFARDLLGKIAGDPLFNPNDINSGLYKKNKALETVRVLRVQ
LFHMKNLFKTCRLAKDVLDQFDSLPGHLTEDLHLFSLNDLSTVRNGVLPTRLRELLKLGS
AHVAGCVLCQAKGFVCEFCGNDKDIIFPFELNKCTRCEECKACFHSKCFRAGKECPRCQR
LAERRERMARKNMEEQEDKEEDEGGGS
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggagattacggcggaggctgaagccgaggaacgcaggagggaacactggaagctgctc
tccagtctaaagaccacggtggagggcctggtgtccaccaacaaccctaatgtgtggtct
cgctatgggggtctacagcggctgcacaaggacatgagccacatcctcagccacggcctc
aagcacgagcaggtgtactacaagcagaaagactactggccctttgtgtgttgtgtccgc
tacatcagccctcacctggcctcacatgtagaacagttcagtaagctggagcccgtgcta
aacaggggtgtacagagtgttggggaaggctacaaggccgagcgctggctattgcacagc
cttcaggtccatctgctctccgcccagctcagacccctgctcaaacaccaggaacacacc
cgcaagtactacaacgaggatgcttttctcctaaaagagccccatgtgacggccatgttt
cagtatctggaggccgtggagcagaacaacccccgtttgctggcactcgttgacactgtc
aagctgtccactctgaagggccctccgtgtgtgggaggccggttgaagagccagagtctg
tgtgagctgcctggggccgggggaggctggagggccgggctgggcaagagccaggggccc
cccagggaagagctcaactgcaggctcaccacctcccagtgctccctctcccaccgagac
agaggacacacactaaacagcataaacacaggggtcatctcagagaggaactcggccagt
gccccgggggccccttgggggtgcgtgtcagggtccgggggggagggcgagaggggtgtg
actcctccccgcccctcggcagctgtcccccacatcgccctgaccgagcccgcctcccca
ggccctgcccactcagacaccctagactctggcgagggcgacgacggcccagaatacctg
gccatcggtaacctggtgcaacgctgcaatcgccgcgactcccagagctccacccccatc
agcgagcccagcaggaagcccggcgggggtggcgcatcaggtggcgaggttcaggtccag
ccccctaggcggagctccctgactgtggtcccgcctcccgcgccgcgaaggtcatccttc
tcggagggacagagggggcagggtcgcgggggcagcagggggcacatccgctcgatgtct
gacatggggatcaaccacaaacatagacatggagggggccacaggaaaatcaccattata
atagaggaccctgtagcagaatcgttggttggagtggactgctgtgtcaaggcctacagc
cccttctcccctgtcatcagtgatgtcagcacacccagctccctctatatggagtcaaat
ggctcccagtacagcagtgttccagacggcatgttccggaagccgtcagagggccagagc
ctcatcagctacctatcggagcaggactttggcagctgtgctgacctggagaaggagaat
gcccacttcagcatctctgagtctctgattgctgccatcgagctgatgaagtgcaacctg
cggcggcgggaggaggaggaggatggcgacgacagcgactcggagatccagcagttaaaa
cagaagatccgcctgcgcaggctgcagatccgacgcacctgcctgccgccctcacagcac
ttgttccactccacagacagcggaggctcctgcagaagctcccaggattcctttcacatg
tccgactcaggctctgccgaggaggtggaggagtgtgagctgagagatggctgtgagggc
cagtccctgatggcggtgtcaagaagcggcctttccctgtcgctcgcctccctcttctca
gatgcagacataaagcgcagtgtgacgtccagtggccgctcgttcctcacctcagagtct
atctctccgtcgttcctccagtctaactcggctgagtcggtggccatggggctgctcagg
cagtttgagggcatgcagctccccgcagcctcggagctcgactggctggtcccagagcaa
gacgcaccgcagaagctcctgcccatccctgactccctgcccatctctcctgatgacggg
gagcatgctgacatctacaagctgaggatccgggtgcgagggaacctagagtgggccccg
ccccgcccccagataatcttcaacatccaccccacgcccaagaggaaaatagttgtggcg
aagcagaactaccgctgtgcaggctgcgggactcgcatagacccagactacattaagcga
atgcgctactgcgagtacctgggccgctacttctgccagtgttgccacgagaacgcccag
gcggtggtgccgggccacgtgttgaggaagtgggacttcagcaagtactacatcagcaac
ttcgcccgggacctgctgggcaagatcgccggagaccccctgttcaaccccaacgacatc
aacagtggcctctacaagaagaacaaagccctggagactgtccgggttttgagggtccaa
ctattccacatgaaaaacctattcaagacatgccgcctagctaaagacgtgctggaccag
tttgacagcctcccaggtcacctgactgaggacctgcacctgttctccctcaacgacctc
agtactgtgcgcaacggagtgctgcccacccggcttcgagagctgctgaaattgggttcc
gcgcacgtggctggctgtgtgctctgtcaggccaagggttttgtgtgcgagttctgcggc
aatgacaaagacatcatcttccctttcgagctgaacaagtgcacacgctgcgaagagtgc
aaggcgtgtttccacagcaaatgtttccgggcaggcaaggagtgcccgcgatgccagcgc
ctggcagagaggcgggaaaggatggcacgcaagaacatggaggagcaggaggataaggaa
gaggacgagggaggcgggagctag
DBGET
integrated database retrieval system
