Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408986
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Entry
139408986 CDS
T10872
Name
(RefSeq) zinc finger CCCH domain-containing protein 13-like isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139408986
Membrane trafficking [BR:
ocla04131
]
Autophagy
Other autophagy associated proteins
Others
139408986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
139408986
NCBI-ProteinID:
XP_071009663
LinkDB
All DBs
Position
5:53144049..53175108
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AA seq
652 aa
AA seq
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MAEFPIDQNKLPGVKEVCRDFAVLEDHCLAHNLQEQEIESHLASNVHKSRLVQQDVALAK
QLQEEEDRRAQAKAKRQHRDIERSDNEIAQEIQEELVRQAEQQRKQEEKDAAIARKLQEK
EMKEERKRQKQLEANFEEEYYEDKGAIRAPLDLDDKPRRPGSNSHSPESHPLTPGSRRDL
SPEYVSLEPSRTRYDSVEPSTSGRSRSPEHHLESRGGGSRGKHGDPYPEDHLSNSRGKRG
GSYPDYHHPTEGRSKGKGGQRGRDPQESQSTFYPDSREPRRHREERGDEGERVVRRKERP
ARPPPQSHNPVERDEAWERKREWEKDRQREARRDEERERDAPRHEERSRGGQRHGLRSQD
QEHGRDKHREKDRRRERTKSRERGLDEDYYEPIPSSRAWTVGGVEGPGDEGGPMARLHSG
PSELCEEEEARRSPRPGVMRGERRGHKDPEGPSMGTERSYTHPAPREPGRIVQGGPGGRG
AVVVGGEYGMGEATQGIAQLDLREQEILDMEVARKLQEEEVKASKMDKRAAQVAQDEEIA
RLLMEQEKKEYKKSREKEKQGMRPEERGMRLEERRRPEGGDFKPNSEEVVRPRSREEEYQ
RHRNHQKPVRPPQPLPHDYENVETSYSYSESHYSSRTPARPEAAYKGTYYRQ
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtttcccatcgatcaaaacaaactgcctggagtaaaagaagtgtgtcgagac
tttgctgtgctggaggaccactgcctggcccataatctccaggagcaggaaatcgagagc
cacttggcatccaacgtccacaagagccgtctggtgcagcaggacgtagcgttggccaag
cagctgcaagaggaggaggaccggagggcccaggccaaggccaagagacaacaccgggac
atagagcgcagcgacaatgagattgcccaggagatacaggaggaattggttcgacaggcg
gagcagcagcgcaagcaggaggagaaggatgcggccatcgctcgtaagctgcaggagaag
gagatgaaggaggagaggaagcgacagaagcagctggaggccaactttgaggaggagtac
tacgaggataaaggagccatccgagcccctctggacctggatgacaaacccaggcgacct
ggttcgaactcccactcccccgagtcgcatccccttaccccaggctcacgacgcgacctc
tcccccgagtacgtttctcttgagcctagcaggaccagatacgactctgtggagcctagc
accagtggacgttccagatcccccgagcaccatttagagagtagaggagggggtagtagg
ggcaagcatggagacccataccccgaggaccacctctccaatagcagggggaaacgtggg
ggcagttacccagactaccaccaccccaccgagggtagaagtaaagggaaggggggccag
aggggccgagacccccaggagtcccagtccaccttctacccagacagccgtgagcccagg
agacacagagaggagagaggggatgagggagagcgggtggtgaggaggaaggagaggccc
gcccggccgcccccgcagtcccacaaccctgtggagagagacgaggcctgggagagaaaa
agagagtgggagaaagaccggcaaagagaagccaggagagacgaggagagggagagagac
gcaccaagacacgaggagagatcgcgaggcggacagagacatgggctgcgatcgcaagac
caagagcatggccgagacaaacacagagaaaaagacagacgccgagagagaaccaagagc
agggagcgaggtcttgatgaagactattacgagcccatacccagcagccgagcctggact
gttggtggggtggagggccctggggatgagggggggcccatggccaggctccactctggc
cccagtgagctgtgtgaggaggaggaggccagaaggagcccccgccccggcgtgatgagg
ggggagaggagaggtcacaaggaccctgaggggcccagcatgggcacggagcgctcctac
acgcaccccgctcccagggagccaggtcgtatcgtgcaagggggaccagggggtcgcggc
gcagtggtggtaggaggggagtacgggatgggcgaggccacccagggcatcgcccaactg
gacctgagggagcaggagatcctggacatggaggtggcccggaaactacaggaggaagag
gtcaaggcgagcaagatggacaagcgcgcagcccaagtggctcaggatgaggagatagcc
cggctgctgatggagcaggagaagaaggagtacaagaagtccagggagaaggagaagcag
gggatgaggccggaagagagggggatgaggctggaagagaggaggcggccagagggagga
gacttcaagcccaactcagaggaggtagtgcgtcccaggtcccgagaggaggagtatcag
aggcacaggaaccaccaaaagcctgtcagacctcctcaacctcttccacatgactatgag
aatgtggagaccagctacagctactcagagagccactactcttcccgcactccagccaga
cctgaggctgcttacaaaggtacctattacaggcagtga
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