Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409007
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Entry
139409007 CDS
T10872
Name
(RefSeq) zinc finger FYVE domain-containing protein 9-like isoform X1
KO
K04679
MAD, mothers against decapentaplegic interacting protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
ocla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139409007
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139409007
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocla01009
]
139409007
Protein phosphatases and associated proteins [BR:
ocla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139409007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SARA_C
FYVE
HypA
FYVE_2
FYVE_CARP1-2
Motif
Other DBs
NCBI-GeneID:
139409007
NCBI-ProteinID:
XP_071009716
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Position
5:54190021..54201994
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AA seq
967 aa
AA seq
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MLKFFSARDDENESLLGSLTEDESDAPSLMDAKHHWLHRPCLLMLKDGDVTKPGQLGCGH
IGSDSPAKPKVHSEGVLSPGVAPVSQLETPAQRLMRQLEEGNCTVTTLSTWGERNFGEAS
TPLMLSPSKAAGPEVEVEEEVKNKPQPSSSKEDSVVEEKELEESGLELQDPPSGSDALGP
YIDDPSGPPVEEPYGGGHDAQVQGPRLGLQSQTKANGLANDETNANGVQADSEEGAVGDC
TPSPMSPLVDPDNELQAGPAGILSRERGTILGEVAPVWVPDAQALVCMMCEVRFTFTKRR
HHCRACGKVFCSVCSGLKFRLTHLDGKEGRVCVSCHSTLVKRTPPRGRRKVWFADEILSN
EKSDSAPCTPIRGPTFSPLLLRRSIAATIRSATGSPQTSRRAPIAQEMPLLNPLQEACGP
CGWGTAALVSSHISSSANLIPLEGLPPILTSTGVKGDYTVEERPSEMVLIQELESGRPNS
LVFVLNANLLAMVKLVNYVNRKCWCVTSKGMHAVGQVEVVVLLQCLPEEKSFPKDIFSHF
IQLYRDALTGKVLSHLGLSQFSSSFLSSEEHAGFLWVRSTLQSLQGLPMPNQPFLFGLLV
HRAEVPWAKAFPLRLMLRLGAEYRFYPCPLYSVRFRKALFGETGHTIMRLLVDFRNYRYT
LPVVPGLTVDLEAQRTCIKIPTNGYEELMRALNKSNEHVLAMGACFNVAADSHLICVQGD
DGQYQTQAISIHNQPRKVTGSCFFVFSGALKAASGYLAKSSIVEDGLMVQITVETMVELR
RSLQEMKDYTITCGSIDQSDSQEHVQVQWLDKECTLNKGVISPIDGKSMESVNSVKMFQK
SEYKSNGKVIRWTEVFFVQRGDRPKSQGDHHTEHSRLTERLARAFCLALCPHLKLLKEDG
MAKLGLRVTLDSQQVGFVAGSNGLPLPAPYLSTLDTVLTPIIHSRGRKRSEGPVVIELIF
YILENIS
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagttcttcagtgcccgggacgatgagaatgaaagcctattgggttcattgaca
gaagatgaatcggatgctccgtctctgatggatgctaagcaccactggctccacagaccc
tgtctgctgatgctcaaagatggggatgtcacaaagccaggacagctgggctgtggacac
atcggatcagattcccctgcaaaacccaaagtccattcagagggggtcttgagcccaggg
gtggctcctgtttcccaactggagacccccgctcagagactgatgagacagctggaggag
ggaaactgcactgtgaccactctttcaacatggggagagaggaattttggggaggcttct
acccccctaatgctcagcccctccaaagctgctgggccagaggtggaggtggaagaggaa
gtgaagaacaagccccagccatcctcttccaaggaggactctgtggttgaggaaaaggag
ctggaggagagtggacttgagctgcaggacccccccagtggctcagatgccctaggccct
tacattgacgacccgtctggtccccctgtggaggagccctatggaggcggccatgatgcc
caggtccaagggcctagactggggcttcagagccagaccaaagccaacggactagctaat
gatgagaccaacgccaacggagttcaagcagatagtgaagagggagctgtgggggactgc
acaccttcccctatgtctccattagtggatccagacaatgagctacaggccggccccgcg
ggcattctgtccagggagcgaggcactatcctcggggaggtggcccccgtgtgggtccct
gacgcccaggcgctggtctgtatgatgtgtgaagtcaggttcaccttcaccaagagaagg
caccactgtcgcgcctgtggcaaggtattctgttcagtgtgctccggtctgaagtttcga
ctaacacacctggatgggaaggaggggcgtgtctgtgtctcctgtcactcaactctagtg
aaacgaacccctccaagggggaggaggaaggtgtggtttgctgatgagatcctatccaat
gagaaatcagactctgcaccttgtaccccaatcagaggccccaccttttcaccgctgtta
ttgaggagaagtatagctgctacaatcagaagtgccactggctcaccacagaccagcagg
agggccccaatagcacaggagatgcccctgctcaatcctctgcaggaggcgtgtgggccc
tgtggctggggtacggcagccttggtcagcagccacatcagcagctctgccaacctcatc
ccactggagggcctccctcccatcctcacctccaccggagtcaaaggagactacacagtc
gaggagaggccctctgagatggttctcatccaggagctggagagcggcaggcccaactcc
ctggtctttgtcctcaacgccaacctactggccatggtcaagctggtcaactatgtaaac
aggaagtgctggtgtgtgacgtccaagggcatgcatgcggttggccaggtggaggtggtg
gtgcttctgcagtgtctgcctgaggagaagagcttccccaaggacatcttcagccacttc
atacagctctacagggacgccctcacaggcaaggtgctaagccacctgggtctctcccag
ttctccagtagtttcctgagcagtgaggagcatgcagggttcctctgggtacgctccact
ctccagtccctgcagggcctgcctatgcccaaccagcccttcctctttggcctactcgtc
caccgggctgaagtaccctgggccaaggccttccccctgcgcctcatgctcagactgggg
gctgagtacagattttacccctgtcctctgtacagtgtgcgcttcagaaaggctcttttt
ggggaaactggccacaccatcatgaggctgctagtagacttcaggaattaccggtacact
ctgccagtggtgcctggactcactgtagatctggaggctcagaggacctgcattaaaatc
cccaccaatggctatgaggagctgatgagggctttgaataagtccaatgagcatgtgctg
gccatgggggcatgcttcaacgtggcggcagactcccacctcatctgtgttcagggggac
gatggccagtaccagactcaggccatcagcatccacaatcagcctcgcaaagtcaccggt
tcctgcttttttgtgttcagtggagctctgaaagcagcatcgggatatcttgccaaatcc
agcatcgtggaagatgggctgatggtgcagatcaccgtggagaccatggtggagcttcgc
cggtcgctacaggagatgaaagactacaccatcacctgtgggtcgattgaccagtcagac
agccaggagcatgtccaggtccaatggctggataaggaatgcactttgaataagggtgtt
atcagccccattgatgggaagtccatggagtccgtcaatagtgtgaagatgttccaaaag
tcagaatacaagtccaatggaaaggtcatccgctggacagaggtgttctttgtacagaga
ggggatcgtcccaagagccagggtgaccaccatacagaacacagccggctgacagagcga
ctggcccgggcattctgcctggcgctgtgcccacacctcaagctgctgaaggaagatggc
atggccaagctggggctgcgtgtcacactggactcccagcaggtggggtttgtggccggc
agcaatggcctgccactcccagccccgtacctcagcaccctggacaccgtgctgacgccc
atcatccacagcagggggcgcaagaggagcgagggacccgtagtcatagagctcatcttc
tacatcctggaaaacatctcttag
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