Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409013
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Entry
139409013 CDS
T10872
Name
(RefSeq) inaD-like protein isoform X1
KO
K06092
InaD-like protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
139409013
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
Motif
Other DBs
NCBI-GeneID:
139409013
NCBI-ProteinID:
XP_071009729
LinkDB
All DBs
Position
5:complement(54564211..54733448)
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AA seq
1996 aa
AA seq
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MYENVPTVSTVERQQVLQALERLQAKMAQREEWTHSERLGVLRDALQSPLLGHILTLQHS
IKQLKDQLNCMPPDTCSEFSFSRKGQLIVSASRPASSLCTSGPGSVLSNGSALSSVGLRS
PDQLQRWLRAAAKGRPTEHISLPKPLSGSLGFSVVGLRPEGTGGHGVFIRQVQPGSIAHR
DGRMLENDQILVINGTPLDQSVTQQQAITLLQQPGDRVELVVARNPSTATQHTPLLPPGP
IIQNEQWGHVEEIELVNDGSGLGFGIVGGKATGVVVRTLVPNSVADKDGRLRTGDHILRI
GETPTWGLASDQVVKVLQGCGSRVRMLIARDPSGQPSTSLPPPPPPVASPVSALPPLPGV
GPQRRLSRTPNLEGYEIHEVPLMKEEGQSLGISIIGYNAFTSEDALGVFVKNVVPGSAAE
QSGNIRIHDRIIAMDGVSLQGFTNQEVLGVMKQTGQTVHLTLARKMASPRPSLERSLDKV
QREPSRVSLKRSAEIKARSSDLQRASSVASSVAPLLEPTETLLMSTSRTQLASAMEGVSL
SELELRAKWEQALGPEYDVLVVELDPVIEDDAELQKYSKLLPIHTMRLGVELDSFDGHHY
VSSVAPEGPVAKHGLLRPEDELLEVNGVQLYGKSRREAVAFLREVPPPFTLVCCRHLTED
DSDYQPDRQDEWRSPSPAASLSELETKLSSVLISQAYLRDNDSEQPPDHVTLQEVSDEEP
EKPAPTYPSHQEEMQQGRRGGEEEDEEGELALWSPDIQLLELEKGERGLGFSILDYQDPL
DVARSVIVIRSLVPGGVAECHGGVLPGDQLVFVNDTYLDTCTLPQAVEVLKAAPSGTVYL
GICKPLVMEGAEERGHGDLALRGTEGQSTVREESVSLLFTHSLLPVSKGFADGSILPEDL
GQEEGEPELILDGSFPRYTSPLTPALTLNPTPTLTTRSLNPTPTPTLTPSPNGEEREMTV
DDDEEEDDGVEDREGQVVDPYPRKPPPSWGEWARDNGGPVLPASVHSGAQEKVEEMSNPD
LQPRALLDQLSLGQSVDSWVETGGDSEADSDSRNGGSELTLTDTDTDSVRLVDTERRKRG
QGGGGRHSDLPEREEGEGEETPAFSHWGPPRRVEVWQEEGESLGISIVGGHSVIKRLKNG
EELKGIFIKQVLPESPAGRTCVLKTGDKILQVSGVDLQNASHEDAVQAIKAAPSPVVFIV
QSLTATPRPVSLTAPSYNKHKAKRRVMPNAAVGGAPPPMRLPPPYRPPSQLTEEQDEELE
EAKERIRLRYGELCGELLCVELDKERHGLGLSLAGNRDRSCLSIFVVGISPGGPAAKNGN
IRVGDELLEINNQVLYGRSHLNASAIIKSASSKVKIILIRNEDAINQMAVPPFPTPPSVL
SSTEAPPPTPPAAAVVSALAPTEKPQPPESLVLCRGPLEASISISKGQSSVVSSGSTATE
LISREATLKSLREGETASKKLKASEKGAESSESMPVPDAKALLEQTANLSKVSQSSSKVP
MVSAVDGGLVSPPAASLPSSCTGPDFEYCSKVDPATCPIVPGQEIVIEIAKGRSGLGLSI
VGGKDTQLDAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRSAAHEDAITALRQTPAK
VRLTVLRDEAQYRDEENLDVFSVELQKKAGRGLGLSIVGKRNGTGVFISDVVKGGAAELD
GRLMQGDQILSVDGDDMRQASQETVAAILKCARGVVLLELGRLKAVSWISPRHTSQGSQM
SHVNTNSTIATPHPPLNSTPSTSQLLNNARKPMTESMTSSKSAGAEMGVRTVEITRGPTD
ALGISIAGGKGSPLGDIPIFVAMIQANGVAAKTHRLKVGDRIVSINAQSLDGLSHGDVVT
MLKNAYGSIILQVIADTNISAIASQVESMSTSTSLPNSPDTQTGEPEAPKPKNISLEKGS
DGLGFSIVGGFGSPHGDLPIYIKTVFSKGAAAVDGRLKRGDQILSVNGESLEGATHELAV
AILKRQKGAVTLEVLS
NT seq
5991 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaaaatgtcccaacagtctccacagtggagcgccagcaggtgctgcaggccttg
gagcggctccaggctaagatggcccagagggaggagtggacacacagtgaaaggctgggg
gtgctgagggacgccctacagagcccactgctaggacacatcctcacgctgcagcactcc
atcaaacaactcaaagaccagctgaactgcatgcctcccgacacctgcagtgagttcagc
ttctccaggaagggccagctgatcgtcagtgccagccgcccggccagcagcctgtgcaca
tccggccccggctcagtgctgtccaacggctcagccctctcctcagtgggtctccgctcc
cccgaccagctccagagatggctccgcgctgccgccaaggggaggccaactgagcacatc
agcctgcccaagcccctgtctggaagcctgggcttcagtgtggtaggcctgaggccggag
ggaactgggggccacggggtcttcatcagacaggtccagcctggaagcatcgcacacagg
gatgggcgcatgctggagaacgaccagatcctggtgatcaacgggacccccctggaccag
agtgtcacccagcagcaggccatcactctgctgcagcagcctggggacagagtggagctg
gtggtggcccggaacccatcaactgccacacagcacacaccactgctcccgcccggaccc
atcattcaaaatgagcagtggggccatgtggaggagatagagctggtgaacgacggctcg
ggcctgggcttcggtattgttggaggcaaggccacaggagtggtggtgaggaccctggtg
ccaaacagtgtggctgataaggatgggcgtctgcgtaccggcgaccacatcctgcgtatc
ggggagacccccacgtggggcctggccagtgaccaggtggtcaaggtgctgcagggctgc
gggagccgtgtgcgcatgctcatcgcccgtgacccctcgggacagccctccacctccttg
ccgccccctcccccgcccgtcgccagtcccgtctcagccctgcccccactgcctggagtc
ggaccccagcgcaggctcagcaggactcccaacctggagggttatgagatccatgaggtg
cctctgatgaaggaggagggccagagcctgggcatctccatcatcggttacaatgccttt
accagtgaagacgcgttgggagtgtttgtgaagaatgtagttcctgggagtgcagctgag
cagagcgggaacatacgcatccacgacaggatcatagcgatggacggggtgagcctgcag
ggcttcacgaaccaggaagttctgggggtgatgaagcagacgggccagacggtccacctc
accctggccaggaagatggcctcgcccagaccctcactggagaggtccctggacaaagtc
cagagagagccgtcccgtgtgtctctgaagaggtctgcagagatcaaagctcggtcatca
gacctgcagagggcctccagcgtggcctccagcgtggcccccctactggagcccactgag
acacttctgatgagcaccagcagaacacagctggccagtgctatggagggagtctctctg
tctgagctggagctcagggccaaatgggagcaggccctggggccagagtacgacgttctg
gtggttgaactggaccctgtcatcgaagatgacgctgagctacagaagtactcaaagctt
cttcccatccacaccatgcgtctaggggtcgagttggactcgttcgacggccaccactac
gtctcttctgtggcccctgaaggccctgtggccaaacacgggctcctgagaccagaggac
gaactactggaggtgaacggggtgcagctgtatggtaagtcgaggcgcgaggcggtggcg
ttcctgcgtgaggttccccctcccttcaccctggtgtgctgcagacacctgacagaggac
gactcagactatcaaccagatcgccaagacgagtggcgctcgcccagccctgccgccagc
ttgtctgagcttgaaaccaagctgtcctctgtgttgataagtcaggcctacctccgggac
aatgacagtgaacaacctccggaccacgtgaccctgcaggaggtgtcggatgaggagccg
gagaagccagcgcccacgtaccccagccaccaggaggagatgcagcaggggaggagaggg
ggggaggaggaggatgaagagggagagctggctctgtggtccccggacattcagttgttg
gagctggagaagggagagagaggcctgggcttcagcatcctagactaccaggatcctctg
gacgttgcgcgctccgtcatcgtcatccgctcgctggtgcccggcggcgtggcagagtgc
catgggggtgtgctccccggggaccagctggtgtttgtcaacgacacctacctggacacg
tgcaccctgccccaggccgtggaggtgctcaaggccgccccgtctggaaccgtctacttg
ggcatctgcaagccattagtgatggaaggagcagaggagaggggacatggggacctagcg
ctccgggggacagagggacagagcacggtccgagaggagagtgtgtccctcttgtttaca
cactcactcctgcctgtttccaagggctttgctgatggctccatcctcccggaggatctt
ggacaggaagagggcgaacccgagctgatcctggacggtagcttccctcgctacacctca
cctttgacccctgccttgacccttaaccccacccccacattgaccactaggagccttaac
cccacccccactcccaccttgacgcccagcccaaatggagaggagagggagatgaccgtg
gatgatgatgaagaggaggatgatggagtggaggatagggaggggcaggtggtggacccc
taccccagaaaacccccaccttcgtggggagagtgggcgagagacaacggaggccctgtc
ctgccggcctctgtacactctggagctcaggaaaaggtggaggagatgtccaatccagac
ctgcagcccagagcccttcttgaccagctctctctgggtcagtctgtggactcctgggtg
gagacgggtggggacagtgaggcagactcagactccaggaacggaggatcagaactcacc
ctgactgacacggacaccgactcggtgcgtttggttgacacggagaggaggaagaggggc
cagggtggaggaggacgacacagtgatctacctgagagggaggaaggagagggagaggaa
acccctgcgttcagccactggggacccccacgcagggtggaggtgtggcaggaggagggc
gagtcccttggtataagcattgtgggcgggcacagcgtcatcaagagactgaagaatgga
gaggaactcaagggcatcttcatcaaacaggtactgccggagagcccagcgggacgcact
tgcgtgctgaagaccggagacaagatattgcaggtatcaggtgtggacctccagaatgcc
agccatgaggatgcggtccaggccatcaaggcagctcccagtcccgtggtcttcatcgtc
cagagcctcactgccacgccgcggcctgtctcgctaaccgcgcccagttacaacaaacac
aaggcaaagaggagagtcatgccgaacgcagcagtaggaggtgcccctcccccgatgaga
ctccccccgccctaccggccccccagtcagctgacagaggagcaggacgaggagctggaa
gaggccaaagagcggatcaggctgcgctacggggagctgtgcggggagctgctgtgtgtg
gagctggacaaagagcgccacggtctgggcctgagcctggcggggaaccgcgaccgctcc
tgcctcagtatctttgtggtgggcatcagccccgggggtcccgctgccaaaaacggaaac
atccgtgttggggacgagctgctggagatcaacaaccaggtcctgtatggccgcagccac
ctgaacgcctcagccatcattaagagcgcctcgtccaaggtcaagattatcctcatcagg
aacgaagatgctatcaaccagatggccgttccccccttcccaactcctccttctgtcctc
tcctccactgaggctcctccccccacaccaccagcagcagcagtggtatcagccttggcc
cccacagagaagccccaacctccagagagcctggtcctctgcaggggccccctggaggcc
tccatctccatcagcaaggggcagtccagtgtcgtctccagtgggagcacagctacagag
ctcatctccagagaagcaacactcaagagcctccgagagggagagaccgcctccaagaag
ctcaaggcctctgagaagggggcggagtcttcggagagcatgcctgtgccggatgccaag
gccctcctggagcagactgccaacctgtccaaggtctctcagagctccagtaaggtgcca
atggtgagcgctgtggacggagggctggtgtccccccctgccgcctccctgccctcctcc
tgcaccggtccagactttgagtactgcagcaaagtagacccagccacgtgtcctatcgtt
ccaggccaagagatagtcatagagatcgccaagggtcgctctggcctgggcctcagcatt
gtagggggcaaagatacacagctggatgctatagtgatccatgaggtatatgaggagggg
gcggcggcacgcgatggacgactctgggctggagatcagatcctggaggtgaatggcgtg
gacctgcgcagcgcggcccacgaagacgccatcacagccctgcggcagaccccggccaag
gtgcgtctgacggtgctacgggacgaggcgcagtaccgcgacgaggagaacctggacgtg
ttcagtgtggaactgcagaagaaggccggccgcggcctgggcctcagtatcgtcggcaag
aggaacggcacgggggtgttcatctcggacgtggtgaaagggggcgccgccgagctggat
ggccgactgatgcaaggggaccagatcctctctgtcgacggcgatgacatgaggcaggca
tcgcaggagacggtggccgccattctcaagtgcgccaggggggtggttctcctagagctg
ggtcgactgaaggctgtctcctggatctctcccagacacacctcccagggaagccagatg
agccacgtgaataccaacagcacaatcgccacgccccaccccccgctaaactccaccccc
tccacctctcagctcctcaacaacgccaggaagcccatgacggagagcatgacctcatca
aagagcgcaggagcagagatgggtgtgcgcactgtggagatcacgcggggtcctactgat
gcgttggggatcagtatagctggggggaagggcagtcctcttggggatatccccatcttc
gtggctatgatccaggccaacggggtggcagccaagacgcacaggctcaaggtaggagac
cggatcgtgagtatcaacgctcagtctctggatggcctgtcccatggggatgtggtcacc
atgctgaagaatgcctacggcagcatcatactccaggtgatcgctgacaccaacatcagt
gccatagccagtcaggtggagagtatgtccactagcaccagccttcccaacagcccagac
acacagacaggggagccagaggcccccaagcccaagaatatctctcttgagaagggttct
gacggcctgggcttcagcatcgtagggggcttcggaagccctcatggagacctgcccatc
tacatcaagactgtcttcagcaagggggcagcggcggtggacgggcgtctgaagaggggt
gaccagattctgtcagtaaacggagagagtctggagggggccacccacgaactggccgtg
gccatactgaagagacagaagggggccgtcactctggaagtcctctcctag
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