Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409044
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Entry
139409044 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: neurofilament medium polypeptide
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139409044
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
139409044
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Motif
Other DBs
NCBI-GeneID:
139409044
NCBI-ProteinID:
XP_071009846
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All DBs
Position
1:complement(80482962..80487032)
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AA seq
1103 aa
AA seq
DB search
MNEKELLHGLNDRFARFIEKVRHLEHENELFEREIEEIKLKAQSPASLAQEHEPELMDLR
NLVHDITLQKHQIEIEHQNLEEDFLTLRDKYEQEARDRSNAENGILVLKKDANDAYLAKL
QLDKKAQSLVDEIRFLKNNHEDEVSEMVAQFQEAQVTVKAHNFGKPDITEALRDIRVQLE
GHATSDFQQAEEGFRVQFAKLTKAAESNREALKATQQEIQXNRRHLQGKTIELDCGKGMR
EALEKQLYELEKRHYAEMIHYQDTIRQLDNELTNAKLDMSGXLRENQDLLNVKMALDVEI
LSYRKLLEGEESHLYTISDTHISMPCIYRQSPVYTLPCLARQGGPTRRSEPQYKFVEEII
SETTRDMEMSEIEETGSEETVGGEGDKLRQKQGEESDKAERRSGEQVDEQKEKARGKVDV
EVDAPEEEGEQEEESKRQQMVTSAEVEVNGDGVSPSEGENGEEGDDEREEEKGGEPDAIK
KTEDIDRGENTQSEVKSAEATSEGEKEKLDTTEKLDSEINETLEKDDTPKQGKSHLEVPM
NGDISTEPKTSELEDSKTGSSIKGEPQVPTENISKEPKKVSEERKIERPLQEKKEVDLKE
ESAPTEQQQDSPKESPIKEGKKVDLTDQSAPTLEQKPDQEHRESDQPQEAESAVTTQEED
LPEPTEKDMESSDNTAELNTSSTKETVEQVKSPDDSGVKTTQDERTVGGKMPDRILSTTS
ECKEDLVQKTPKKEVGPTEQKVSSKDDSVKIVVQNEHNGREKVTKDVSMGEDKGKESETS
PKPNPTVTPKEETTLYPEQTVTPKEETSPKPEPAVTAKEETSPKPEPAVTAKEETSPKPE
LAVTAKEETSPKPEPTVTPKDETSPKPDQTVTPKEESSPQQEPTVTPKEETSPKPDATVA
PKEETAPQPEPTVTPKVETSPKPEPAVTAKEESAPKLELAVTTIEETSPKPEPAFTLKLK
TSPKAEPAVTPKEETSPKPDPAVTPKVQTSPKPDPTITPKQEISPNSDPTLTPESMTTPK
PDSTLTPESLTSPTEESETMGSGDKAKTITPPEEQMPAVVESKDSHRGVPESNTTQEKPE
ESMDKEPEKVTEPKDRELEDQGL
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagaaagaactgctccatgggctgaacgaccgtttcgcccgattcatagagaag
gtgcgtcatttagagcatgaaaatgaattgtttgagagggaaatcgaggaaatcaaacta
aaggcacagtcccctgcgtctctggcccaggagcacgagccggagcttatggacctgagg
aacctagttcatgacatcacccttcagaagcatcagatcgagatagagcatcagaacctg
gaggaagatttcctcaccttgagagacaagtatgagcaggaggcacgtgaccgctcgaac
gcagagaacggcatccttgtgctgaaaaaggacgccaacgatgcatacctcgccaaactt
cagttggacaagaaagcgcaatctctggtggacgagatccgcttcctgaagaacaaccat
gaggacgaggtatcagaaatggtggcccagttccaagaggctcaagtaacggtcaaggcg
cacaactttggcaaacctgacatcacagaggctctccgggacatccgtgtgcagttagaa
ggtcacgccacctccgactttcagcaagccgaggagggcttccgtgtccagttcgcaaag
ttaaccaaagcggcagaaagtaacagagaggcgttgaaggcaacccagcaggagatccag
tagaatagaaggcacctgcaggggaagacaattgaactggactgtggtaaaggaatgaga
gaggccctggaaaaacaactatatgagctggagaagcgtcactatgcggaaatgattcat
taccaggacactatcaggcagctggataatgagctgaccaatgctaaactagacatgtct
ggctaactgagagagaaccaggacctgctgaatgtcaaaatggctttggatgtggagatt
ctctcttacaggaaactcctggagggtgaggagtcccatctgtacaccatctctgacacc
cacatctccatgccctgcatctaccgccagtcccccgtctacaccttgccttgcctggcc
cggcagggagggcccacacgcaggtctgaaccccagtacaagtttgttgaggagatcatc
tctgagaccaccagagacatggagatgtccgagattgaggagacaggctccgaggagacg
gtcgggggagagggagacaagttgagacagaagcagggagaagagagtgacaaagctgag
aggagaagtggggaacaggtggatgagcagaaagagaaagctagaggtaaagtggatgtt
gaagtggacgccccggaggaagagggtgaacaggaggaagagtctaagagacagcagatg
gtcacatcagcagaggtcgaggtaaatggagatggagttagccctagtgagggagaaaat
ggagaggagggagatgatgaaagagaggaggaaaaggggggtgagccagatgcaatcaaa
aagacagaggacattgacagaggtgaaaatacacaaagtgaagtcaaatcagctgaggcc
accagtgagggagagaaggaaaaactggacacaacagagaagctagacagcgagataaat
gagacattagaaaaagatgacaccccaaaacaaggcaaatcccacctagaggttcccatg
aatggtgacatctcaacagaacccaaaacgtcagagttagaggatagcaaaacaggaagt
tcaataaagggtgaaccacaggtccccacagagaacatctccaaagaacccaaaaaggtg
tcagaggagagaaaaatagaaaggcctttacaagagaaaaaagaggtagatctgaaagag
gagagtgccccaacagagcaacaacaagatagcccaaaagaaagtcccatcaaagaggga
aaaaaggtagatctgacagaccagagtgccccaacactggagcagaaacctgatcaggag
cacagagagtcagaccaacctcaagaggcagagagtgctgtgacaacacaagaagaggat
ctccctgagcccacagagaaggacatggaatcctctgataacactgcagagctcaacacc
agttcaaccaaggagacagtggagcaggtgaagtcacctgatgattctggtgtaaaaacg
acacaagatgagagaacagtaggaggtaaaatgccagacagaattctcagcacaacaagt
gagtgtaaggaagaccttgtgcaaaagactcctaaaaaggaggtgggtccgacagagcaa
aaagtgagcagcaaggatgatagtgtaaaaattgttgtgcagaatgaacataatggcaga
gaaaaggtcacaaaagatgtctcaatgggtgaggacaaggggaaagaatcggagacatcc
cctaaacccaaccccactgtgactcctaaagaagaaacaaccctgtatccagagcaaact
gtcacccctaaagaagaaacttccccaaaaccagaaccagcagtcaccgcaaaagaagaa
acttccccaaaaccagaaccagcagtcaccgcaaaagaagaaacttccccaaaaccagaa
ctagcagtcaccgctaaagaggagacatcccctaaaccggaacccactgtcacccctaaa
gacgaaacatccccaaaaccggaccaaactgtcacccctaaagaggagtcatccccacaa
caggagccaaccgtaacccctaaagaagaaacatcccctaaaccggacgccactgtcgcc
cctaaagaagaaacagccccgcaaccagagccaactgtcacccctaaagtagaaacttcc
ccaaaaccagaaccagctgtcaccgctaaagaagaatctgccccaaaactagaactagca
gtcaccactatagaggaaacttccccaaaaccagaaccagcattcacccttaaattaaaa
acttctccaaaagcagaaccagcagtcacccctaaagaagaaacttccccaaaaccagat
ccagcagtcacccctaaagtacaaacttccccaaaaccagacccaaccatcacccccaaa
caggaaatatcccctaattcagacccaaccctcaccccagaatcaatgacaacccctaaa
ccagactcaaccctcaccccagaatcattgaccagccctacagaagagagtgaaacgatg
ggcagtggtgacaaagctaagacaatcacaccaccagaggaacagatgcctgcagttgta
gagagcaaggactcacacaggggggtgccagaaagcaacacaactcaggagaaaccagag
gaaagtatggacaaagagcctgagaaggttacagaacccaaagacagagagcttgaagac
caaggcctctga
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