Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409050
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Entry
139409050 CDS
T10872
Name
(RefSeq) microtubule-associated protein 1S-like
KO
K10429
microtubule-associated protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
139409050
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocla01009
]
139409050
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139409050
Protein phosphatases and associated proteins [BR:
ocla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139409050
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
139409050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAPB1_N
Motif
Other DBs
NCBI-GeneID:
139409050
NCBI-ProteinID:
XP_071009810
LinkDB
All DBs
Position
5:56611989..56657260
Genome browser
AA seq
1392 aa
AA seq
DB search
MATQQTEAIEAMENANRTSHPGFSNDKYSLLVIVGGHSRTGFVDYVVAEIKRGIRSWDVD
LTFCNLDEQLKLFVSRHSAFFSEEIKGQRTLQHSGDVLDTKVVGNPSHELVCSEVRRLIS
DVSRHKLLVLAGQCVEEAGDLVLQTGCFSLSDFIQIFADEEIGELLSSADPTQKASLTLS
CPNTGVWKNSVLEKHNLQDFIDIKTNLPSVLPEMEGLQEFTEYLSESLEPQSSFELLEPP
STVGFLKLSRPCCYVFPGGRGDSAFFAVNGFNILVNGGSDPRSCFWKLVRHLDRVDCLLL
THIGTDNLPGVNSLLQRKVVELEDEQSADSQINEDWMKNLISPDIGIVFLNAPERLKSFE
GDPKELRSCDQVALTLQHLDRLTINPEPVSRSNGPTIEPVILFQKMGVGRLELYVLNPVK
GSKELEALMKNWPGNGSNMKGSEIPLPCLVSICALLVWHPASTHEKIIRVLFPGCTPQAK
ILEGLDKVKHLEFLKHPAVSLRDLEASKSDKQPKRAESRESLKSLPKDSRPSSALLKDKL
GRGDLRKQDVKTKPKGPSDIAPKEKEGDEKLKLKDVDAKQRLPKPEKLMTKKEPLKDEKK
EVKKRDEKASAGVAKKDENVEKKREPIKKEPLGLKPKKDVKPDQKKEIKKEIKPDEKKPT
KPVSKDVKKVTAGPSLGNAEAKKNVGKNGTLKKDAIPKKDSLNKGGKSKTSKKTENQKAS
ASEGDADRSKMSTPEDMTAEFEKLRAENGESEKKTAVAVSTIANNEGMAQPETENGSREN
AEKGDILESPEKFRCMETLPNPEKALGTTSPLTKTPKSDRSVNFDITPTEYRLLDGALRN
GQDACASSDEKTLELVSPADSAPNSAGHTPFHQSPEEDAQGSGEDSSLGGRVPSLGFEDC
HVMGSCRNSEVGSLKGNLENSTSSQEKQSSLLTLSPFMLPDSVSPNITSMPAEIGSPHST
EVDESLSVSFEQVLPSIDESPKGDHMDRSYSNGHFADPDPKMGMSLPLRTCHNMRPPGDG
SEERLTGFQGLLPDVPHDVDLCLVSPCEFKHPKSPENQQQHLSPGLATGSPRELSENSDH
SQDLVKPQSVIHSDRHSPQGQETPPTSASESLNTATDSDIPPGTEDCPSITADMDSDEDS
GSFPPHHPHDHPSSHSSNRGAQHSSQDPPPAPMKDLPPLPPQPGACMADPEADAPSKTSK
SSATKTKKPAGVTHRLTSATSTTLNSKTKTGSTTGTLKITSSLDTRPSSRNITNGSRPGT
ARSTSSGSVGSKASAAGGAPVYLDLAYLPSGCASTTIDVEFFRRLRSSCYIVSGNEHLKE
SVMRPILDALLDGKTAWPDVQVTLIPTFDSLTMHEWYQETHERQGELGITVLGSNSTVAM
QEETFPACKVEF
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacaacaaacggaagcgatcgaagcaatggaaaatgcgaaccgaacttcgcat
cctggcttcagtaacgacaagtattctctgctcgtcattgtcggtggacatagtcggact
ggatttgtggactacgtggtggcagagataaagagaggcatccgctcatgggatgtggac
ctgacattctgtaacctggacgagcagctcaagctctttgtgtctcgacactctgccttc
ttctcggaagaaataaaaggccagaggacactgcagcacagtggagacgttctagacacc
aaggtggtggggaacccatcccatgagttggtctgctcagaggtgcgccggcttatatct
gacgtgtctcgccacaagttgttggttcttgctggacaatgtgtcgaagaggcaggagac
ctggtcttacaaacaggatgtttctctctcagtgacttcattcagatatttgctgatgaa
gagattggagagttattgagctcggcagaccctacacaaaaagctagcctcacactgagt
tgtcctaacactggagtgtggaagaactcagtgttggagaaacacaacctacaagacttc
attgacatcaaaacaaacctgccatcagtgctacctgaaatggaaggtctgcaggagttc
acagaatacctctccgagtccctggagccacagtcttcttttgagctgctggagcccccc
agtactgtgggcttcctcaaactctcccgcccctgctgctacgtatttccaggtgggaga
ggagactctgccttctttgctgttaacggtttcaacatcctggtcaacggtgggtccgat
ccacgctcctgtttctggaaactggttagacatctggacagagttgactgcctgctcctc
acccacatcggtactgacaatcttccaggggtgaacagtcttctccaaaggaaagtggta
gaactggaggatgaacaatctgccgactctcagatcaatgaggactggatgaaaaatcta
atttctcctgatattggcatagtttttcttaatgctccagagagattgaagtcattcgag
ggtgatcccaaagaactgcggagctgcgatcaggtggcactcacgttgcagcaccttgac
aggctaacaatcaatccagagcctgttagtcgctcaaatggacccaccattgagcctgtt
atacttttccagaagatgggagtcggtcgtctagagctgtatgttcttaacccagtcaaa
ggcagtaaagagcttgaggctttgatgaagaactggcccggcaatggatctaacatgaaa
ggctcagagatacccctgccttgccttgtctccatctgtgctctattggtgtggcatcct
gccagtactcatgagaagatcattcgagttctcttccctgggtgtactccgcaggccaag
attcttgaaggacttgacaaagtaaagcatttagaattcctgaaacaccccgccgtgagc
cttagggaccttgaagcatccaaatcagataaacaaccaaaacgtgcagagagtcgggag
agccttaagtcccttcccaaggactccagacctagcagtgccttgctgaaggacaaactt
ggacgtggggaccttaggaaacaagacgtgaagaccaagcccaaaggcccaagtgacatt
gctcctaaagaaaaggaaggggatgagaagttgaaattgaaggatgtggatgctaaacaa
agacttccaaagcctgaaaagcttatgacaaagaaggaacctttaaaggatgagaaaaaa
gaagtcaaaaagagggatgagaaagcctctgcaggtgttgccaaaaaggatgagaatgtg
gagaaaaagagagaaccaattaagaaagaacctcttggtctaaaaccaaagaaagacgtc
aaacctgatcaaaagaaagagatcaagaaggaaatcaagccagatgagaagaaaccaaca
aaacctgtcagcaaggatgtcaaaaaagtgacagctggaccttcattaggaaacgcagaa
gcaaaaaaaaacgtaggcaagaatggaactttgaagaaggatgcaatccccaagaaagac
tcattgaacaaggggggaaagtcaaagacgagtaaaaagacagagaatcaaaaagcttca
gcctctgaaggagatgcggatcgttctaagatgtcaacgcctgaagacatgacagcggaa
ttcgagaagctcagagcagaaaatggagagtcagagaaaaagactgctgttgcagtgagc
actatagctaacaatgaaggaatggcgcaacctgaaacagagaatggatcaagagaaaat
gcagagaagggagacatcttggaaagtccagaaaagttccgctgcatggagacactccca
aatccagagaaggccctgggaaccacttcacctcttaccaaaactcctaaaagtgaccgc
agtgtaaactttgatattacaccaactgaatacagacttcttgatggggccctgcgaaat
ggacaagatgcatgtgccagctcagatgagaagactttagagttggtctcccctgctgac
tcagcccctaatagcgctgggcatacccctttccaccaatcacctgaagaggatgctcag
ggctctggtgaggacagtagtctcgggggaagggtgcctagccttgggtttgaagactgc
catgtcatgggttcttgcaggaactctgaggtaggctccttgaaggggaacctagagaac
tctacatcgtcccaggagaagcaatcaagccttttgacactgagtcccttcatgctgccg
gactctgtctcccctaatattacctctatgcctgctgaaatcggttccccacactcaaca
gaagttgatgagtctctttccgtgtcttttgaacaggtgctcccatctattgatgagtca
cccaagggagaccatatggacaggtcctactctaatgggcattttgctgatcctgacccc
aaaatggggatgtccttacctttgaggacatgtcataacatgcgtccgccaggggacggc
tcagaggaacgccttactggatttcagggtcttctccctgacgttccccatgacgtcgac
ctctgcctggtctcaccttgtgaattcaagcacccgaaatccccagagaaccaacaacag
catctgtctccggggctagcgacaggtagcccgcgagaactatcagaaaacagcgaccac
tcccaggacctagttaagccacaaagcgtcattcatagtgatcgacattcgccacaaggt
caggagactccacccacatctgctagtgagtccctcaacacagccacagattcagacata
cccccagggactgaagactgcccctccatcactgcagacatggactctgatgaggattct
gggagtttcccaccccaccatccacacgaccatcccagctctcactcctccaacagggga
gctcaacattcctctcaggaccctcccccagccccaatgaaggacctgccacccttgccg
ccccagcccggtgcctgcatggctgaccctgaggctgatgctccaagcaagacctcaaag
agcagtgccacaaaaaccaagaaaccagctggggtcacacacaggttaacgtcagccacc
agtacgactctgaacagcaagaccaagactggcagcacaactggtacgttgaaaatcacc
tcaagtcttgacacaaggccttcatcccgcaatatcactaatggctccagacctgggact
gcaaggtcaacttcttcaggttctgtgggcagcaaggccagtgcagctggaggggcacca
gtttatttggacctggcttatctcccatctggttgtgcctctaccaccattgacgtggag
ttcttccgacgcctgcgctcctcctgctacatcgtcagtggcaatgaacacctgaaggag
tctgtcatgagacctattcttgatgccctactggacgggaagacagcctggcccgatgtg
caggtgaccctgatccccacttttgactcactgacgatgcatgagtggtaccaggagacc
cacgagaggcagggggagctgggcattaccgtgctgggcagcaacagcactgtggccatg
caagaggagaccttccctgcgtgtaaagtggagttctga
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