Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409076
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Entry
139409076 CDS
T10872
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 26-like isoform X1
KO
K15169
mediator of RNA polymerase II transcription subunit 26
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocla03021
]
139409076
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
139409076
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GFIT
Motif
Pfam:
Med26_C
Med26_M
Med26
ATR1_N
Motif
Other DBs
NCBI-GeneID:
139409076
NCBI-ProteinID:
XP_071009856
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Position
5:57782095..57793651
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AA seq
599 aa
AA seq
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MTAATATPQQMRDRLMQAIDGQNNQICNMVAVMDVISYLEKYPITKEALEETRLGKLIND
VRKKTKDEDLVKRAKKLLRTWQKLIEPGQSEAQSKGNRGPPVAANGANNPCRTAVSPPAA
TPPSDKMVSELKSRNDFNNYYSPKAEKSGNRKRKGEQRDGQHLPAKISKKTAYERTRNSR
LPINGIGASPKAFMDTLDAHSHPKSDKDGADHLDNDRLNKIPINAVKPHPSSPGLAKPPS
TSALLKTAVLQQQAKMGLVASGRGQHQPKSPHRNSYSPRSTKQDVVVKLSAPKATTLLSP
AQSPRVMDSSGLEPSSLPSPQPLTSCIQGSHTVGPPPAESAFHQDGQADVDQRLQHSTMR
PDSLHNSKATSHSKVKAEGNGAATSTVRKRNKYRSRDYTVNLGGQPTEESTKPCRLKDRR
LTFDPVTGQIKSWTHKESYPEWEATVVPVTPEPRTELLKRNQYAQNTPVTPSPFQQTNWK
ELSRNEIIQSYLNRQSNVLTSSGAQTLGAHFFMNEYMEHHIKEARRTHVLVPNIPDMDLP
GVSREVINEDLDRIHKEHWPGVNGCHDTKDNWYDWTECISLEPHGDESKLNILPYVCLD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggccacggcaactccgcagcagatgagagaccggctgatgcaggccatcgat
ggccaaaacaatcagatctgcaacatggtagctgtaatggatgtcatttcatatttggag
aaatatcccatcaccaaagaagcacttgaggaaacccgccttggcaagctgatcaacgac
gtaaggaaaaagacaaaggatgaggatcttgtcaagcgtgcaaagaagctcctgcgcacc
tggcagaagctgattgagcctgggcagagtgaggcacagtccaaggggaatagagggccg
ccagtcgctgccaacggtgctaacaacccctgccggacggctgtctcccctccagctgcc
accccgccttcggataaaatggtttcggagctcaagagtagaaatgactttaacaactat
tattctcccaaagcagaaaagtcaggcaaccgaaaacgcaaaggggagcagagggatgga
cagcacctaccagcgaaaatctctaaaaagacagcctatgaaagaacacgaaactcacgg
ctgccaataaatggaattggggccagtcccaaggcttttatggacacacttgatgctcat
tcacatccaaaatcagacaaggatggtgctgatcatcttgacaatgacagactcaacaaa
attcccatcaacgctgtcaaacctcaccctagctcaccgggacttgccaaacctcctagc
acttccgcattgctcaaaacggccgtgttgcaacagcaagccaaaatgggcctggttgct
tcaggaagggggcaacatcagcccaaaagcccccacagaaactcgtatagtcccagaagt
acgaaacaggatgtggttgttaaactgtctgcaccaaaagcaacaactctactgagccct
gctcagagtcccagggttatggacagctctggactggagccctcttctttgccttctcca
cagcctttaacctcatgtatccagggttcccacactgttgggcctccgcctgcagagtcc
gcctttcatcaggatggacaggcagacgtggaccaacgccttcagcacagtaccatgaga
cctgactctctgcacaactcaaaagccacgtcacacagcaaggtgaaggcggagggcaat
ggtgctgccactagcacagtgagaaagaggaacaaatacaggtccagagactacacagtg
aacttgggtgggcagcccacggaagagagcacaaaaccatgtagattaaaagaccgtaga
cttacgtttgaccctgtaacagggcagataaaatcctggacccacaaagagtcttaccca
gaatgggaggctacagtggtgccggtcacaccagaacctcggacagaactgctcaagcgg
aatcaatatgcacagaatacccctgttactcccagtccattccaacagaccaactggaaa
gagctgtcaaggaatgaaatcatccagtcttaccttaaccgtcaaagcaatgtgctcacg
tcatctggggctcaaaccttgggggcacactttttcatgaatgagtacatggaacatcat
atcaaagaggccagaagaacacatgtgctggtaccaaatatccctgacatggacttacct
ggggtgagccgagaggtcataaacgaggacctcgacagaatacacaaagagcactggcct
ggggtgaacgggtgccatgacaccaaggacaactggtatgattggacagagtgcatatcc
ttagaaccacatggggatgagagcaaactgaacattctgccatatgtctgcctagactga
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