Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409091
Help
Entry
139409091 CDS
T10872
Name
(RefSeq) large subunit GTPase 1 homolog isoform X1
KO
K14539
large subunit GTPase 1 [EC:3.6.1.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
139409091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ocla03009
]
139409091
Ribosome biogenesis [BR:
ocla03009
]
Eukaryotic type
Pre-60S particles
GTPases
139409091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
RsgA_GTPase
AIG1
Motif
Other DBs
NCBI-GeneID:
139409091
NCBI-ProteinID:
XP_071009883
LinkDB
All DBs
Position
5:complement(58278583..58285713)
Genome browser
AA seq
653 aa
AA seq
DB search
MGKKKSAMGLGRSLIKERLNAGRGNKRGDTWLHTSELNDGYDWGRLNLQSVTEQSSMDDF
LATAEMAGTEFVAEKLNIKFVAAEARAGLLTAEETAKLKKLHEENKQLLRIPRRPHWDEG
TSPEVLQQTERDSFLEWRRELAELEEEQKMILTPFERNLDFWRQLWRVIERSDIVVQIVD
ARNPLLFRCPDLECYVKEVSRYKVNLLLVNKADLLTRQQRRIWARYFQREGLRAVFWSAL
VENERLEAEEKGMEVEEKEDEKSEAEDEDEGMPDNDNMSRRQEVEDNKEKNAEESEEEED
EESDIEGEQFKDCVAEGDWQTASEGEEASEDEEADDEESIDGSTHGSSFHNSSRLLTKDE
LLAIFKAAHDGPTLKEGELTVGLVGYPNVGKSSTINTILRNKKVSVSVTPGHTKHFQTLY
VEPGLCLCDCPGLVMPSFVSTKAEMMCCGILPIDQIRDHVPAISLVCQTIPRDVLEGTYG
INIIRPREDEDPDRIPNYEELLMAYGYMRGFMTTHGQPDQSRSARYILKDYVIGKLLYCH
PPPHISAADFQPQHSKFQAGDADGEDSKIGNKPSKVKRHENLVDKNFFHQENVRALTKGV
QSFMGYKEGSVGQRELVNQGKPGLEQPVGKPWKKHGNRNKKEKVRRLTKHLDA
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagaaaaagtctgccatggggctcgggagatcactgataaaggagagactcaac
gcaggccgaggcaacaagaggggcgatacttggctccacaccagtgaactgaacgatggt
tacgactggggtcgtctcaacctgcagtcagtgactgaacagagctctatggatgacttc
cttgcaactgctgaaatggccgggacagagtttgttgcagaaaagctcaacatcaagttt
gtggcagctgaagctcgggcaggattactgacagccgaggagacggcaaagctgaagaag
ctgcacgaggagaacaaacaactcctcagaattccacgaaggcctcactgggatgaaggc
accagtccagaggtcctccagcagacagagagagacagcttcctggagtggagaagagaa
ctggcagagcttgaagaggagcagaaaatgattctcacaccttttgagaggaatttggat
ttctggagacagctctggagagtgattgagaggagtgacattgttgttcagattgttgat
gccagaaacccattgctatttcgttgccctgacctggagtgctatgtaaaagaggtgtcc
cggtacaaggtgaacttgttgctggtgaacaaggctgacctgctgacccggcagcagcgg
aggatctgggccagatacttccagagagagggcctccgcgctgtgttctggtccgcactg
gtggagaacgagaggctggaggcagaggagaagggaatggaagtggaggagaaggaggat
gaaaagagcgaagcggaggatgaagatgagggaatgccagacaacgacaatatgagccga
agacaggaggtagaggataacaaggagaagaatgcggaagagagcgaggaggaagaagat
gaggagagcgatattgaaggggagcagtttaaagactgcgtagcagagggagactggcag
acggcatcggagggtgaagaggcatcagaggatgaggaggcagacgacgaagagagtata
gatggctccacccacggctcctccttccacaactccagtcgcctgctgacaaaagatgag
ctgcttgccatatttaaggcggctcacgatgggccaacattgaaagagggcgagctcaca
gtggggctggtggggtatcccaatgtgggcaaaagttcgaccatcaacaccattcttaga
aataagaaggtgtccgtctcagtcacgcctgggcacaccaagcactttcagacgctgtat
gtggagccaggtctgtgtctgtgtgactgccctggcctggtcatgccctcctttgtgtcc
actaaagctgagatgatgtgctgtgggatcctgcccatcgaccagatacgagaccatgtg
cctgccatctctctcgtgtgtcagacaattcctcgggatgtgctggagggcacctatggc
atcaacataatccgcccgcgagaggacgaggaccccgaccgcatccccaactatgaggag
ctactgatggcctatggatacatgaggggcttcatgacaacacacggacaacctgaccag
tcgagatcagcccgttacatactcaaggattacgtcattggaaaactgctgtactgccac
cctcctccccacatcagtgctgcagacttccagccccagcacagcaagttccaggccgga
gatgcagacggtgaagactccaagataggcaacaaaccgagcaaagtcaagaggcatgag
aatcttgtggacaagaacttcttccatcaggagaatgttcgggcgctcacaaagggggtc
cagtctttcatgggttacaaggaaggcagcgtaggccagcgtgaactggtaaatcaaggg
aaacctggcttagaacagcctgtgggcaaaccctggaagaagcatggcaacaggaacaag
aaagagaaagtacgtcgactcaccaagcacctggatgcctga
DBGET
integrated database retrieval system
