Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409106
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Entry
139409106 CDS
T10872
Name
(RefSeq) calreticulin-like
KO
K08057
calreticulin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04141
Protein processing in endoplasmic reticulum
ocla04145
Phagosome
ocla04148
Efferocytosis
ocla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139409106
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139409106
04148 Efferocytosis
139409106
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
139409106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ocla03110
]
139409106
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ocla04091
]
139409106
Chaperones and folding catalysts [BR:
ocla03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
139409106
Lectins [BR:
ocla04091
]
L-type lectins
139409106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
Motif
Other DBs
NCBI-GeneID:
139409106
NCBI-ProteinID:
XP_071009908
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All DBs
Position
5:59089991..59094556
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AA seq
461 aa
AA seq
DB search
MSHGHLFRNRELEMIILPVSFSVYNRLSVKSSTHSLPVQRDGESMRVAVAILAVFASVAV
TIDATVYFKEQFQDGDAWKSRWLVSEHKSDYGEWKLTAGKFYGDAEADKGLQTSQDARFY
ALSSRFEPFSNEGKSLVVQFTVKHEQKIDCGGGYVKIFPADLDQAAMHGDSQYYIMFGPD
ICGYSTKKVHVIFNYKGKNHLIKKEIKCKDDELTHLYTLILNPDQTYEVKINNEKVESGT
LEDDWDILPPKTVKDPEAKKPEDWDDRAKIDDPTDTKPEDWEKPENIPDPDAKIPEDWDV
DMDGEWEPPMIPNPEYQGEWKAKQIDNPDYKGAWVHPEIDNPEYTADAAIYKFDNIGVLG
LDLWQVKSGTIFDNFLIGDDIKEAEEFGNETWGATKEPEKKMKDAQEEEERKAREEEEKS
KKDTADDEGDEDEDDEPEEEDDDSPMEEEEGEDPKKDKDEL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagccacggccatctgttcaggaatagggagttagaaatgatcatattacctgtttcc
ttcagcgtttataaccgactttcagtgaaaagcagcacacacagtttacctgtacagcgg
gacggtgaaagcatgagggtcgcagtggcaatattagcagtttttgcatcggtagctgtc
accattgacgctactgtatacttcaaggaacaatttcaggatggagatgcatggaagagt
cggtggcttgtatcagagcacaagtcagactatggcgagtggaaactgactgctgggaag
ttttatggtgacgctgaggccgataaaggtctccagaccagccaggatgcccgtttctat
gctctctccagccgctttgaacccttcagcaacgagggaaagtccctggtggtccagttc
actgtcaaacacgagcagaagattgactgtgggggcggatatgtcaaaattttcccagca
gacctagaccaggcagctatgcacggggactcgcagtattacatcatgtttgggcctgac
atctgtggctacagcaccaagaaggttcatgtcatcttcaactacaaaggcaagaaccac
ctcatcaagaaagaaatcaaatgcaaggatgacgagctgacacatctgtacactctgatc
ctgaacccggaccagacatacgaggtgaagatcaacaatgagaaggtggagtcaggcact
ctggaggatgactgggacattttgcccccaaagactgtcaaggaccccgaggccaagaag
ccagaggactgggacgacagggccaaaatcgacgaccctaccgacaccaagccagaggac
tgggagaagcctgagaacatccctgaccctgatgctaagatccctgaggactgggatgtg
gacatggatggcgagtgggagcctcctatgatccccaacccagagtaccagggagagtgg
aaggcaaagcagattgacaaccctgactacaaaggtgcctgggtgcaccctgagatcgat
aaccctgagtacacagccgatgccgccatctacaagtttgacaacattggagtgttgggt
ctggacctgtggcaggtgaagtctggcaccatctttgacaacttcctgatcggtgatgat
ataaaagaggctgaggagtttggaaacgagacatggggagctacaaaggaaccagaaaag
aaaatgaaggatgcacaggaggaggaggagaggaaagcaagagaggaggaggagaagagc
aagaaggacactgctgatgatgagggggatgaagatgaggatgatgagccagaggaggag
gacgatgacagcccaatggaagaggaggaaggggaagatcccaagaaggacaaggacgag
ttgtaa
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