Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409111
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Entry
139409111 CDS
T10872
Name
(RefSeq) mucosa-associated lymphoid tissue lymphoma translocation protein 1-like isoform X1
KO
K07369
mucosa-associated lymphoid tissue lymphoma translocation protein 1 [EC:3.4.22.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
139409111
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139409111
Peptidases and inhibitors [BR:
ocla01002
]
Cysteine peptidases
Family C14: caspase family
139409111
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Gene cluster
GFIT
Motif
Pfam:
MALT1_Ig
Peptidase_C14
Ig_3
Ig_2
I-set
ig
V-set
Ig_4
Death
Motif
Other DBs
NCBI-GeneID:
139409111
NCBI-ProteinID:
XP_071009932
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All DBs
Position
5:59312358..59333011
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AA seq
860 aa
AA seq
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MAGYVLFCSTMTMKCLVTNTPVWFCMSNLLYKTPTCGYAKKVDRLEMGDWNLSIGTLSEG
AQSRLADMLDNAKCGWRQLANVVTEEPRFRCSENEMTSCSLQVLSPTGSPSRYLLERLSE
RSCTLGFLLHCLKKMEHHEAVQYLTANVMERFQITVQPQAQHATEGGRVVLVCKAIGPAA
MGYQWFKGKEEVLGGSGPELVLCPLTPTHQGHYICRVNHGENFVFSQWAHVRIVRSAGSS
TGVSSSFFPPSVSGVRIVRQPRPQVVAEGDSLCLDCFAEANPPPQYQWYHNKQPMPTDKI
STLRILCVTTADRGMYSCRVFNLYHEVWSDQVHVKIDPGSSIDASWGEIDPAATPSPARQ
ISKLYATDKVALLMGNMNYLHHRPLRAPMADVHEMTNLLRQLDFKVVSLLDLNWQEMHSA
VTEFLLLLDRGVYGLLYFAGHGYENYGNSFMVPIDAPASYTSENCLWVQDVLQRMQERET
SLNVFLLDMCRKRNLNDGVPPQPGQLKVTANIVFGYATCVDAEAFEVNKDDLSNGIFINF
LKQRVMEDEKVTVMLDRVAEDMGRCEITRGRQALELRSNLSERRALTDRIQSSGCPETTS
ARNLQWAIAHVLPKSRNLQFDCGVTVQLGFAAEFSNIMIIYTRILENPKEIASCSAHLTD
FTEGLDMDLKMSNQENLLDAGSLLPMEILLPAELPGLYTRLKGLQRLKKELTFTVCLQYK
YTNLDEEVHERQTVTVGKPLVSKLNLHEPRLPRSYSASSSFDLHSFSHSSSFPEGFGPSF
PASDTSSIGSASTTWSYYSQPGVSATPSSPGKLNLPVEDDSPELFDSDTPQPLTTSKSLP
HGQVEDLTYRFSNMHNFHSC
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggcagggtacgttttattctgctctacaatgacaatgaaatgccttgtgaccaataca
cccgtgtggttttgtatgagtaacctgttgtataaaactccgacatgtggatacgcaaag
aaagttgacagactagagatgggtgactggaatctcagcattgggactttgagtgaagga
gctcagagcaggttagctgacatgctggataatgctaaatgtggatggagacaacttgcc
aatgttgtcactgaggaacctcgattccgctgcagtgagaatgagatgaccagttgttcg
ctccaggtgctcagcccgactggcagccccagccgctacctcctagagaggctatctgag
cgctcctgcaccctgggcttcctgctgcactgcctgaagaagatggagcaccatgaagct
gtgcagtacctcactgctaacgtgatggagcggtttcagatcacagtgcagccccaggcc
cagcatgctacagagggaggcagggttgtgttggtctgtaaggccattggtcctgctgct
atgggctaccagtggttcaaaggcaaagaagaggtgctgggtggaagtggtccagagctg
gtcctttgccctttaaccccaacccaccagggacactacatctgccgggtcaaccatgga
gagaacttcgtcttctcccagtgggcacatgtccgcattgtcaggtcagctggctccagc
acaggtgtcagtagcagcttcttccccccctcagtgagtggagtgcgtattgtccgtcag
ccccggccccaggtagtagctgagggggactccttgtgtctggactgctttgctgaggcc
aaccctcctcctcagtaccagtggtaccacaataaacaaccaatgccaacagacaagata
agcaccctgaggatactgtgtgtgaccacagcagatcgaggaatgtacagctgcagggtg
ttcaacctgtaccatgaggtgtggagcgaccaggtccatgtcaaaatagaccctggttcc
tccattgatgcctcctggggagaaatagaccctgctgccacacctagccctgccaggcag
ataagtaaattatatgccacggacaaggtggctcttctgatgggcaacatgaactacctg
caccacaggcctctgcgagcgcccatggctgacgtgcacgagatgaccaacctgctgcgc
cagctcgacttcaaggtggtttctctgctggacctcaactggcaggagatgcacagcgct
gtaactgagttcctactgctgctcgaccgcggcgtctatgggcttctgtactttgcgggt
catggttatgagaactatgggaacagtttcatggtgcccattgatgccccggcttcttat
acctcagagaactgcctgtgggtgcaggatgtgctacagcggatgcaggagcgagagacg
agcctcaatgtatttctattggacatgtgtcgcaaaagaaacttgaacgacggcgtccct
ccacagccagggcaactgaaagtgaccgcaaacatagtgtttggttatgccacgtgtgtg
gatgcagaggcctttgaggtgaacaaagacgacctgtccaatggaatcttcatcaatttc
ctcaaacagagagtcatggaggacgagaaggtcactgtcatgctggacagggtggccgaa
gacatgggtcggtgtgagatcacacgagggcgtcaggctctagagttacgcagtaatctt
tctgagcggcgtgcactcactgaccgcatccagagctccggctgcccggagaccacctcg
gcacgcaacctgcagtgggccatagcacacgttcttccaaagagccgtaacctgcagttt
gactgtggcgtgacggtgcagctgggcttcgcagcagagttctccaacatcatgatcatc
tacacccgaatattggagaaccccaaggaaattgcgtcctgctccgcccatctcacagac
ttcactgagggtttggatatggatctgaagatgagtaatcaggagaacctcctagatgca
gggagtttactgccaatggagatcctcctgcctgcagagcttccaggcctctacacccgc
ctgaagggactgcagagacttaagaaggagttgacattcactgtgtgccttcagtataag
tatacaaacttggatgaggaggtccatgagaggcaaactgtcactgtgggcaaaccactg
gtatccaaactcaatctccacgaacctcggcttccccgctcctactcggcctcctcctca
ttcgaccttcactccttcagccattcctcctccttcccagagggctttgggccaagcttc
cctgcctcagatacttcctccattggctcagcctccaccacctggtcctattactcacag
ccaggagtgtctgccaccccatcttcccccgggaagttaaatctacctgtggaggatgac
agtccagagttgtttgattctgacaccccccagcctctcaccacaagcaaaagcctgcct
catggtcaagtagaggacctcacatatcggttcagtaacatgcacaacttccattcatgt
tag
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