Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409129
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Entry
139409129 CDS
T10872
Name
(RefSeq) fibrillin-2-like
KO
K23342
fibrillin 2/3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139409129
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ocla00536
]
139409129
Glycosaminoglycan binding proteins [BR:
ocla00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
139409129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
FXa_inhibition
EGF
TB
hEGF
EGF_3
Fibrillin_U_N
Plasmod_Pvs28
EGF_FBN_1st
EGF_MSP1_1
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
139409129
NCBI-ProteinID:
XP_071009971
LinkDB
All DBs
Position
5:59906100..59998700
Genome browser
AA seq
2892 aa
AA seq
DB search
MGAGKLARLLLGWAAVCWAAVHTAYGQAGAGDGGYQASRFTGKVDEREVQRVRRRGQETL
RGPNVCGSRFHSYCCPGWKTLPGGNQCIVPICRNSCGDGFCSRPNMCTCGSGQLSPSCGA
GAGAGAGMQSCNVRCMNGGSCQEDSCSCQKGYTGNHCGQPVCENGCQNGGRCIGPNRCAC
VYGFTGPQCERDYRTGPCFTQVNNQMCQGQLSGIVCTKTLCCATIGRAWGHPCEMCPAQP
HPCRRGFIPNIRSGACQDVDECQAIPGLCAGGNCINTVGSYECKCPAGHRQSDTSHKCED
IDECSTNPGVCDGGECTNTAGSYVCTCPRGYITSTDGARCVDQRVGTCFSALASGRCAGD
LQGQYTKMQCCCDTGRCWASGQIPEMCPVRGSDEYRRLCIDGVPHGTGNGGFPHGVFPNG
GGSNGNGYSYGYKLNPNGPNGNGHHGNGGGIGGGGQGGGGGNGFGGNGGGRNIVSLNETV
DVCKHFTNLCLNGRCIPTPTSYRCECNMGYRQDVRGECIDVDECVSNPCVNGDCVNTPGS
YHCKCHEGYQGTPTKQACIDIDECIVNGVMCRNGRCVNTGGSFQCICNAGFELTPDGKNC
IDHDECATTNMCLNGMCINEDGSFKCICKSGFALAPNGRYCTDIDECQTPGICMNGRCIN
SEGSFRCECPPGLAIDVDGRVCVDTHMRTTCYGAIKMGTCSRPFPGAVTKSECCCASPEH
GFGEPCLPCPARNSAEFQAVCSSGIGITADGRDINECALDPDICQNGMCENLRGSYRCIC
NIGYESDSSGKNCVDINECLVNRLLCDNGLCRNTPGSYTCSCPKGFVFKPDSETCEDINE
CDSSPCVNGICRNIAGSFNCECSHGSKLDSTNTICVDSMKGTCWLNIQDGRCEVNINGAT
LKSECCSTLGAAWGSPCERCEIDTACSRGFARMKGVNCEDINECEVFPGVCTNGRCVNTQ
GSFLCECAEGLTLDGSGRTCVDVRSEQCYMKWHEDECGEPLPGRYRVDMCCCSVGAAWGI
DCEECPKAGTPENKAICPRGPGFANRGDILTGRPFYKDVNECKVFSGLCSHGTCRNTIGS
FKCRCSSGFALNMEERNCTDIDECRISPDLCGHGTCVNTPGSFECECFEGYESGFMMMKN
CMDIDECERNTLLCQGGACLNTEGSYECECPPGHQLSPDGSSCEDVNECQLSNNLCKNGH
CVNMVGNYQCSCDTGYQVTPDRQGCVDIDECTIMNGGCDTHCTNSEGSYECSCSEGYALM
PDLRTCADIDECEDSPDICDGGQCTNVPGEYRCLCYDGFMASMDMRTCIDVNECELNPNI
CLHGDCENTKGSFICHCQLGYFVKKGSTGCTDIDECEIGAHNCDMHAACVNVPGSFKCRC
RDGWVGDGIKCVDVDECSTEEHNCNLNADCVNTPGSYRCACKEGFNGDGFSCSDMDECAD
NVNLCENGQCLNAPGGYRCECEMGFTPTEDSKACQDIDECNFQNICVFGTCQNLPGMFRC
VCDDGYELDRSGGNCTDINECADPVNCINGLCVNTPGSYLCNCPPDFELNPTGVGCVDTR
VGNCFLDTLARGDGGISCSAEIGVGVTRASCCCSLGGAWGNPCELCPPINSTEYKTLCPG
GEGFRPNPITVILEDIDECQELPGLCQGGNCVNTFGSFQCECPAGYYLNEETRICEDIDE
CTAHIGICGPGTCYNTLGNYTCVCPPEYMQVNGGNNCMDMRKSVCYRNFNDTCENELSFN
MTKKMCCCAYNVGKAWNKPCEACPTPVTSEYQVLCGNQAPGFIIDIHTGKPIDIDECREI
PGICAHGACINQIGSFRCECPMGFSYNNILLICEDIDECNSGDNLCQRNANCINFPGSYR
CECSPGFKLSPSGACVDRNECQEIPNVCSHGECIDTQGSYRCLCHNGFKATADQTMCMDI
DECDRQPCGNGTCKNTVGSYNCLCFPGFELTHNNDCMDIDECSALVGQVCRNGQCINSLG
SFQCLCQDGYELTPDGKNCVDINECVSLPGTCSPGTCQNLDGSFRCICPTGYEVQNDQCI
DINECEVEPNICQFGTCTNTPGSFQCICQNGFVLSDNGRRCFDTRESFCFTRFESGKCSV
PKAFNTTKAKCCCSKMPGEGWGDPCELCPHDSEASFKSLCPYGHGSLPGLGETREDMNEC
LDNPGVCVNGVCINTDGSFRCECPFGYNLDYTGVNCVDTDECSIGNPCGNGTCTNVVGGF
ECSCHEGFEPGSMMTCEDINECSLNPLLCAFRCVNTFGSYECMCPSGYVLRDDHRMCRDQ
DECSEGLDDCESKGMSCKNLIGTFMCICPPGMQHRPDGDGCMDLNECRAKPGVCKNGRCE
NTVGSYRCVCNEGFQPSSTGTDCIDNRQGFCFTEVLQTMCQQGSTNRNSVTKSECCCNLG
RGWGPQCELCPLPGTVQYKRMCPLGPGYTTDGRDINECTVMPDLCKNGQCINTIGSFRCH
CNVGYTTDFTSTSCIDMDECSASPKPCNFLCKNTEGSYLCSCPRGYTMQPDGKTCKDLDE
CSTKQHNCQFLCVNTIGGFTCKCPAGFTQHQTACIDNNECNGQNSVCGSRASCVNTPGSF
NCDCGKGFSLDTTGLECEDVDECGSNHRCQHGCQNMMGGFRCGCPQGYVQHYQWNQCVDE
NECSGASVCGSASCYNTLGSFKCLCPSGFDFEQGGGGCQDVNECSMGSNPCSFGCSNTDG
GYLCGCPGGYYRAGQGHCITGQGFQDQYSSEGDDEDSLSPEACYECKINGDVGKKGRHRR
HAAGDNDLKEVSMASVDTQESIPMNLSLASLLNKEPLLELLPALEPLEHHVRYVITHGNQ
GEHFRLLERRDGKSVLRLGRKSPPPGSYRLEIASLPLFGPRRLRQLEEEHDSDYLLGEIG
DALRIKLHIHLH
NT seq
8679 nt
NT seq
+upstream
nt +downstream
nt
atgggagcagggaagctggcccggttgctgctgggatgggcggccgtttgctgggccgcg
gtccacacagcgtatggccaggcaggagcgggagatggagggtaccaagccagccgcttc
acggggaaggtggacgagagggaggtgcagagggttcgccggagaggccaggagacactc
agagggcccaatgtgtgtggctctcgcttccactcctactgttgccctggctggaagact
ctgcctggagggaaccagtgtattgtcccgatctgccgtaactcgtgcggtgatggcttc
tgttccagacccaacatgtgcacctgcggcagtggccagctctcccccagctgtggggcc
ggagccggagccggagccggaatgcagagctgtaatgtcaggtgtatgaacggaggcagc
tgccaagaggactcctgctcctgtcagaaaggctacaccggcaaccactgtggacagcct
gtgtgtgagaatggttgccagaacggcgggcgctgcattgggcccaacagatgtgcctgt
gtctacggcttcactgggccgcagtgcgagagagactaccggactgggccctgtttcacg
caggtcaacaaccagatgtgccagggccagttgagtggcatcgtgtgcaccaagacattg
tgctgtgccaccatcggacgggcatggggacacccctgtgagatgtgccccgcccagcct
cacccctgtcgccgaggcttcatccccaacatccgcagcggcgcgtgccaggatgtggat
gagtgccaggccatcccggggctgtgtgcaggaggtaattgcatcaacacagtgggctcc
tatgagtgtaaatgtcctgcgggccaccgccagagtgacaccagccacaagtgtgaagat
attgacgagtgcagcactaacccaggtgtttgtgacggaggtgaatgcaccaacacagcc
ggcagctacgtctgcacctgtccccgtggttacatcaccagcactgacggtgccagatgt
gtagaccagcgtgtgggcacgtgtttctcagcgttagcgagtgggcgctgtgcaggtgac
ctgcagggccagtataccaagatgcagtgctgctgtgacacgggccgctgctgggcttct
ggacagatccctgagatgtgccctgtcagagggtccgatgagtacagaaggctgtgcatc
gatggggttccccatggcacaggtaacggaggtttcccccacggagtcttccccaatggt
ggtggcagcaacggtaacggttacagctacggctacaagctcaacccaaacggacctaat
ggcaatggtcaccatggcaacggaggaggaattggaggagggggacagggaggaggagga
ggaaatggtttcggaggaaacggtggggggcgtaatatcgtatcactcaatgagaccgtt
gatgtgtgtaaacatttcaccaacctgtgtttgaacggacgctgtatccccaccccgacc
agctaccgctgtgaatgtaacatgggctacagacaggatgtacgcggggagtgtatcgat
gtggatgagtgcgtcagcaacccctgtgtcaatggagactgtgtcaacacacctgggtcg
taccactgcaagtgtcacgaaggctaccagggcacccccaccaaacaggcctgcattgat
attgacgagtgcatcgtgaacggagtgatgtgtcgtaacggacgttgtgtcaacactggc
ggaagcttccagtgcatctgcaacgctggctttgaactcactcctgatggaaagaactgc
atagatcatgatgagtgtgccaccaccaacatgtgtctcaatggaatgtgtatcaatgag
gatggtagcttcaagtgtatctgtaaatctggctttgccctggcacctaacggacgctac
tgcacagacattgatgagtgccagaccccaggcatctgtatgaacggacgctgtatcaac
tctgagggctccttccgctgtgagtgcccgccgggcctggccatcgacgtggacgggaga
gtgtgtgtagacacacacatgcgcaccacctgctacggcgccatcaagatgggcacgtgc
tcgcggcccttcccgggagccgtcaccaagtccgagtgctgctgtgccagtcctgaacac
ggcttcggagagccctgcctgccctgccctgcccgcaactcagctgagttccaggccgtg
tgcagcagtgggattggcatcaccgctgacggcagagatatcaacgagtgtgccttggac
cctgacatctgtcagaacggcatgtgtgagaacctgagagggagctaccgctgcatctgt
aacatcggctacgagtccgactccagcggaaagaactgcgtggacatcaacgagtgtctc
gtgaaccgtctgctgtgtgacaacggcctgtgtagaaacacccccggcagctacacctgc
tcctgtcccaaaggcttcgtcttcaaaccagactctgagacctgcgaagatatcaacgag
tgtgactccagcccgtgtgtcaacggaatctgtcgcaacatcgccgggtccttcaactgc
gagtgttctcacggcagcaagctggactccaccaacaccatctgcgtggacagcatgaaa
ggaacgtgctggctgaatatccaagatggccgctgtgaggtcaacatcaacggcgccaca
ctcaagtctgagtgctgctctacgctgggagccgcctggggcagtccttgtgaacgctgc
gagatcgacactgcctgttccagagggttcgctcgtatgaagggagtcaattgtgaagac
atcaatgagtgtgaggtgttcccgggggtgtgtaccaacgggcgctgtgtcaacacccag
ggctccttcctctgtgagtgtgctgagggtctcaccctggacgggagcggacgcacctgc
gtggacgtgcgcagcgagcagtgctacatgaagtggcacgaggatgagtgtggcgaaccg
ctgcccgggcgctaccgcgtggacatgtgctgctgctcggtgggcgcggcctggggcatc
gactgtgaggagtgtcccaaggcgggaaccccggagaacaaggccatctgcccccgagga
ccaggcttcgccaaccgaggagacatcctgactggcagacccttttacaaagatgtgaat
gagtgtaaggtgttcagcggcctgtgttctcacggaacgtgtcgcaacaccatcggcagc
ttcaagtgtcgctgcagcagcggcttcgccctcaacatggaggagaggaactgcaccgat
attgacgaatgtcgtatctctccggacctgtgtggccacggcacctgtgtgaacaccccc
ggcagcttcgagtgtgaatgcttcgagggctacgagagcggcttcatgatgatgaagaac
tgcatggatattgatgagtgtgagaggaacacactgctgtgtcaaggaggcgcctgtctg
aacacagaggggagttacgagtgtgaatgtccccccggacaccagctgagccccgacggc
tcctcctgtgaagatgtgaacgagtgccagctgagcaacaacctgtgtaagaacggccac
tgtgtcaacatggtggggaactaccagtgctcctgtgacacgggctaccaggttacacca
gacagacagggctgcgttgatattgatgagtgtaccatcatgaacggcggctgtgacaca
cactgtaccaactcagagggcagctacgagtgcagctgtagtgagggctacgctctcatg
cccgacctcagaacctgcgccgacatcgatgagtgcgaggacagccctgatatctgtgac
gggggtcagtgtaccaacgtccccggagagtaccgctgtctctgctacgacggattcatg
gcctccatggatatgaggacctgcattgatgtgaacgagtgtgagctgaaccctaacatc
tgtctgcatggggactgtgagaacaccaagggatccttcatctgtcactgtcagctggga
tactttgtcaagaagggctccaccggctgcacagatattgatgagtgtgagattggagcc
cataactgtgacatgcatgctgcctgcgtcaacgtccccggaagcttcaagtgtcgctgt
cgtgacggctgggtgggggacggcatcaagtgtgtggacgtggatgagtgttccactgaa
gagcacaactgcaacctcaacgcagactgtgtcaacaccccaggctcctaccgctgtgcc
tgcaaggagggcttcaatggggatggcttctcctgttctgatatggatgagtgtgctgac
aacgtgaacctgtgtgagaacggccagtgtctgaacgctccggggggctaccgctgcgag
tgtgagatgggcttcacccctactgaggacagcaaggcctgccaggacatcgacgagtgt
aacttccagaacatctgtgtgtttggaacgtgtcagaacctcccggggatgttccggtgt
gtgtgtgacgacggctacgagctggaccgcagcggaggaaactgcactgacattaacgaa
tgtgcggaccctgtgaactgcatcaacggcttgtgtgtgaacacaccaggaagctacctg
tgtaactgccctccggacttcgagctcaatccaactggagtgggctgtgtggacacacga
gttggcaactgtttcctggacacgttggcgcgtggcgacggcggcatctcctgcagcgct
gagatcggcgtgggcgtcacccgcgcctcctgctgctgctccctggggggagcctgggga
aacccctgtgaactctgcccccccatcaactccacggagtacaagacactgtgtcccgga
ggagagggcttcagacctaaccccatcactgtcatcctggaagacattgatgagtgccag
gagctgccaggcctgtgccagggtggcaactgtgtcaacaccttcggtagcttccagtgt
gagtgccccgcaggctactacctcaacgaggagacacgcatctgcgaggatattgatgag
tgcacagcccacattggaatctgtggccctggtacctgctacaacaccttggggaactac
acctgcgtgtgtcctcctgagtacatgcaggtcaacggaggaaacaactgcatggacatg
aggaagagcgtgtgttaccgcaacttcaacgacacgtgtgagaacgagctgtcgttcaac
atgaccaagaagatgtgctgctgtgcctacaacgtgggcaaagcctggaacaagccctgt
gaagcctgccctacccctgtcacctcggagtaccaggtactgtgtgggaaccaggctcct
gggttcatcatagacatccacacaggcaagcccatcgatattgatgagtgtcgagagatc
ccggggatatgtgcacacggagcgtgtatcaaccagataggaagcttccgctgtgaatgt
cccatgggcttcagctacaacaatatactgctcatctgtgaagatattgacgagtgtaac
agcggagacaacctgtgccaacgcaacgccaactgtatcaacttcccagggagctaccgc
tgcgagtgctcaccaggcttcaagctgtccccaagtggggcctgcgtggaccgcaacgag
tgccaggagatccctaacgtgtgtagccacggagagtgtatcgacacccagggcagctac
cgctgtctctgccacaacggcttcaaggccaccgccgaccagacaatgtgcatggatatc
gacgagtgtgacagacagccgtgtgggaacggaacctgtaagaacacagtgggctcctac
aactgtctctgcttccctggattcgagctcacgcacaacaatgactgcatggacattgat
gagtgcagtgcgttggtgggtcaggtgtgtaggaacggccagtgtatcaacagcctggga
tccttccagtgtctctgtcaggatggctacgaactcaccccagacggaaagaactgtgtc
gatatcaatgagtgtgtgagtcttcctggtacctgctctcctggaacctgtcagaacctg
gacgggtcgttccgctgtatctgcccaactggatacgaggtccagaacgaccagtgtata
gatatcaacgagtgtgaggtggagcccaatatctgccagtttggcacgtgcaccaacacc
ccaggaagcttccagtgtatctgccagaatggctttgtcctgtcggacaatgggcgccgc
tgtttcgataccagagagagcttctgtttcacccgcttcgagtcaggcaagtgttctgtg
cccaaggccttcaacaccaccaaggccaagtgctgctgcagcaagatgccaggcgagggc
tggggagacccgtgcgagctgtgcccacacgatagcgaggcgtcctttaaaagcctgtgt
ccctacggccatggatccctgcctggacttggggaaacccgtgaggacatgaacgagtgt
ctggacaacccaggcgtctgtgtgaacggtgtctgtatcaacacggacggatcgttccgc
tgcgagtgtccctttggctacaacctggactataccggggtcaactgtgttgacactgat
gagtgctctataggaaacccctgtggtaacgggacctgtactaatgtggtgggaggcttt
gagtgctcctgtcatgaaggcttcgaacctggctccatgatgacctgtgaagatatcaac
gagtgctctctgaaccccctgctgtgtgccttccgctgtgtcaatacttttggttcctac
gagtgcatgtgtccctcgggctacgtgctgcgagacgaccaccgcatgtgcagagaccag
gatgagtgttcggaggggctggatgactgtgagtccaagggcatgtcctgtaagaacctg
attggcactttcatgtgtatctgcccccctggcatgcagcacagacctgacggagatggc
tgcatggacctgaatgagtgtcgcgcgaagcctggcgtctgtaagaacgggcgctgtgag
aacacagtgggcagctaccgctgtgtgtgcaacgagggcttccagcccagctccaccgga
acggactgtatcgataaccgacagggcttctgtttcaccgaggtgcttcagactatgtgt
cagcagggctccaccaacaggaacagtgtcaccaaatcggagtgctgctgcaatcttggg
cgcggctggggaccccagtgtgagctctgcccactgcctggcaccgtgcagtacaagagg
atgtgcccactgggacccgggtacaccaccgacggcagagacatcaatgagtgcacggtg
atgccagacctgtgtaagaacggccagtgcatcaacaccatcggatcgttccgctgccac
tgcaacgtgggttataccaccgacttcaccagcacctcctgcattgatatggatgagtgt
tccgcgtctcccaagccctgtaacttcctgtgtaagaacacagagggcagctacctgtgc
tcctgccccagaggatacactatgcagcctgacggaaagacctgcaaagatctggatgag
tgttccaccaagcagcacaactgtcagttcctgtgtgtcaacaccatcggcggtttcacc
tgcaagtgtcccgcaggcttcacccagcaccaaaccgcctgcatcgacaacaatgagtgt
aatgggcagaacagtgtgtgtggctccagggcttcttgcgtcaacactcccggcagcttc
aactgtgactgtgggaaaggcttctctctggacaccactggcctggagtgtgaagatgtg
gatgagtgtggcagtaaccatcgctgtcagcacggctgtcagaacatgatgggaggtttc
cgctgtggctgtcctcagggctatgtacaacactaccagtggaaccagtgtgtggatgag
aatgagtgttcgggtgcgtctgtgtgtggctcggcctcctgctacaacaccctgggcagc
tttaagtgtttgtgtccgtccggctttgactttgaacagggagggggcggctgccaggat
gtcaatgagtgttccatgggcagtaacccctgcagcttcggctgctccaacacagacgga
ggatacctgtgtggctgtcctggaggttactacagggctggacagggtcattgtataacg
ggccagggcttccaggaccagtatagctcagagggagacgatgaggacagtctgtctcca
gaggcctgctacgaatgtaagatcaacggagacgtcggcaagaagggacgacacagacgt
cacgctgctggggacaacgacctcaaggaggtgagcatggccagcgtggacacccaggag
tccatccctatgaacctgagcctggcctcgctgctcaacaaggagcccctgctggagcta
ctgccggccctggagcccctggagcaccatgtgcgctacgtcatcacccacggcaaccag
ggcgagcactttcgcctgctggagcgccgcgacgggaagagcgtgctgaggttgggcagg
aagtcgcctccccctggctcctaccgcctggagatcgctagtctgccccttttcgggccg
cggcgcctccgacagctggaggaggaacacgacagcgactacctgctgggagagatagga
gacgccctgcgcatcaagctgcacatccacctgcactga
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integrated database retrieval system
