Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409134
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Entry
139409134 CDS
T10872
Name
(RefSeq) ras-related protein Rab-11B-like
KO
K07905
Ras-related protein Rab-11B
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139409134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139409134
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139409134
04031 GTP-binding proteins [BR:
ocla04031
]
139409134
Membrane trafficking [BR:
ocla04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
139409134
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139409134
Exosomal proteins of other body fluids (saliva and urine)
139409134
Exosomal proteins of colorectal cancer cells
139409134
GTP-binding proteins [BR:
ocla04031
]
Small (monomeric) G-proteins
Rab Family
Rab11/25 [OT]
139409134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
RsgA_GTPase
AAA_22
PduV-EutP
Csa3_N
Gtr1_RagA
AAA_14
AAA_16
ABC_tran
AAA_21
DUF3289
NTPase_1
AAA_24
TniB
FAD-SLDH
FeoB_N
AAA_5
AAA_7
Motif
Other DBs
NCBI-GeneID:
139409134
NCBI-ProteinID:
XP_071009980
LinkDB
All DBs
Position
5:complement(60097329..60109676)
Genome browser
AA seq
217 aa
AA seq
DB search
MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKMI
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNNVIM
LVGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIHRIVSQKQ
IADRSAHDESPGNNVVDISVPPTTDGQKNKLPCCQSL
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgggaacccgagacgacgaatacgactatctattcaaagtggtgctgatcggagactct
ggtgtggggaagagtaacctactgtcccgtttcacacggaatgagttcaacctggagagc
aaaagcaccatcggtgtggaattcgccacccgcagcatccaggtggacggcaagatgata
aaagcccagatctgggatacagctggacaggagcgctacagagccatcacctcagcgtac
taccggggggcggtgggggctctcctagtgtacgacattgccaagcatctaacctatgaa
aatgtggagcgctggctgaaggagctgagggatcatgctgataacaacaacgtcatcatg
ctggtgggcaacaagagtgacctgcgccacctcagggcagtgcccacagacgaggctcgc
gccttcgcagaaaagaatacgctatcatttattgagacctcagctttggactccactaat
gtagaagaggcgttcaagaacatcctcacagaaatccaccgaatcgtatcacagaagcag
atagctgacagatcagcacatgacgagtctccaggcaacaatgtagtggacatcagtgtc
ccccccaccactgatgggcagaaaaacaaactaccgtgctgccaaagcctgtga
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