Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409148
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Entry
139409148 CDS
T10872
Name
(RefSeq) cold-inducible RNA-binding protein B-like isoform X1
KO
K13195
cold-inducible RNA-binding protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139409148
Spliceosome [BR:
ocla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
139409148
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RBD_DEAH11
RRM_5
CofB_pilin_dom
Motif
Other DBs
NCBI-GeneID:
139409148
NCBI-ProteinID:
XP_071010012
LinkDB
All DBs
Position
5:complement(61196902..61203472)
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AA seq
174 aa
AA seq
DB search
MSDEGKLFVGGLSFDTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFENPDEAK
DAMLAMNGKSLDGRQIRVDQAGKSGGGGRSGGGFRGGSSGGRGGGGGYFRGGRGGGGGRG
GRGFSRGGGERGYGGGRYDNRSGGSYGSDRGYYNKDRAQGGGYGDRSGGDEGGW
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgaagggaagctttttgtgggtggcctgagctttgacactaatgaacagtca
ttagaagatgtgttctccaaatatgggcaaatatctgaagttgttgtaattaaagacagg
gaaactcagaggtccaggggctttggtttcgtcacctttgagaacccggatgaggccaag
gatgctatgctggccatgaacggcaagtcacttgacggcagacagatccgtgtcgaccag
gctggcaagtctggcggtggtggcaggtccgggggcggattccgagggggctcgtcgggt
ggcagaggtggtggaggaggatacttccgtggagggagaggtggtggtggtggaagaggt
gggcgtggcttctcacgaggtggtggggagcggggctatggcggtggacgttacgacaac
agaagtggtggctcatacggatcagaccgcggctactacaacaaagacagagcgcaagga
ggaggatacggagatcgttctggaggtgacgagggcggctggtag
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integrated database retrieval system
