Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409158
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Entry
139409158 CDS
T10872
Name
(RefSeq) repulsive guidance molecule A-like
KO
K23096
repulsive guidance molecule A
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139409158
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Motif
Pfam:
RGM_N
RGM_C
C8-3_MUC4
Motif
Other DBs
NCBI-GeneID:
139409158
NCBI-ProteinID:
XP_071010032
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All DBs
Position
5:61917733..61933473
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AA seq
465 aa
AA seq
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MLSTDPEDEHFESYSVDEQQSKNSILTEWIGMGRSGPQNLAKRQLWNCITFTMVLLSLLL
RPAHCQQCRIQRCNAEYVASTSPSSGLQEDSLSDVDYCIALRAYALCTRRTARSCRGDLV
YHSAVFRIKELFTQHNCSSDGPTSSARAPSTSRPVVSELCDYESRVLASGPASQGKKYAH
CGLFGDPHLRTFRDEFQTCKVEGAWPLIDNRYLSVQVTNVPVVLGSSATATSKITVIFKS
YHGCTEQKVYQATTEDLPSAFQDGSRSGGEGGSLWIVEKIGSGGRLVTIQARYIGTSIIV
RRVGRYLTFAIRMPEDTLDFSEENSGLQLCLHGCPRNELIKEHTLGRQPLHPHLPGSGSN
PELGPLLPPHQIYTVERATAKCRETLQVEDIYFQSCVFDLLTTGDPEFSMAAYGALEDLK
ALPPSKLKQNSPRTPHVQQNRGGLYTLATATPSLVTLLLLVLLLL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctacagatcctgaagatgagcattttgagagctacagcgtcgatgagcagcag
tcgaagaactccattctaactgaatggattggcatggggagaagcggacctcaaaacttg
gctaagcggcagctttggaactgtattacttttacgatggttttactttcgctgctgctc
cgaccagcacactgccaacagtgccggatccagcgctgcaatgcggagtacgtggcctct
acctctccctctagtggtctccaggaagactccctgtccgacgtggactactgcattgcc
ttgcgtgcctacgccctgtgtacccgccgcacagcgcgcagctgcaggggtgaccttgtc
taccactcggccgtgttccgtatcaaagagctcttcacccagcacaactgctccagcgac
gggcccacctcctcggccagggcccctagcacctccaggccagtcgtgtccgagctgtgc
gactacgagagccgcgtgctggcctcgggccctgccagccagggaaagaagtatgcccac
tgtggattattcggggacccacacctgcggacgttccgcgacgagttccagacctgcaag
gtggagggggcgtggcctcttatcgataaccgttacctgtcggtgcaggtgaccaacgta
cctgttgtcctgggctccagcgccaccgccaccagcaagataacagtgatcttcaagtcg
taccacggctgtacagagcagaaggtgtaccaggctaccaccgaggaccttccctctgcc
ttccaggacggctctcggagtggcggggaggggggcagtctgtggatcgtagaaaagatt
ggctccgggggccgcctggtgacgatccaggcccgctacattgggacgtccatcatagtg
cgccgagtggggcgctaccttaccttcgccatccgcatgccagaggacacccttgacttt
tctgaggagaacagtgggctgcagctttgtctgcacgggtgccctcgcaacgagctcatc
aaggagcacacgctggggcgccagccccttcacccccacctcccgggctccgggtctaac
ccggagctggggcccctactgcccccacatcagatctacacagtggagcgtgccacagcc
aagtgcagggagaccctgcaggtggaggacatatacttccagtcatgtgtgtttgacctg
ctcaccacaggggaccctgagttctccatggcagcctacggggccctggaggatctgaag
gcccttcctcccagcaaactgaagcaaaactctcccaggactcctcatgttcaacaaaac
agaggggggctatacacgttggccacagccacccccagtctggtcacactcctgctcctg
gttctactgcttttgtaa
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